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Yoram Cohen

Publications and source records attributed to Yoram Cohen.

76 records · Page 5Linked to original sources

High b-value q-space analyzed diffusion-weighted MRS and MRI in neuronal tissues - a technical review.

This review deals with high b-value q-space diffusion-weighted MRI (DW-MRI) of neuronal tissues. It is well documented that at sufficiently high b-values (and high q-values) neuronal water signal decay in diffusion experiments is not mono-exponential. This implies the existence of more than one apparent diffusing component or evidence for restriction. The assignment of the different apparent diffusing components to real physical entities is not straightforward. However, the apparent slow diffusing component that was found to be restricted to a compartment of a few microns, if originating mainly from a specific pool and if assigned correctly, may potentially be used to obtain more specific MR images with regard to specific pathologies of the CNS. This review examines the utility of analyzing high b-value diffusion MRS and MRI data using the q-space approach introduced by Callaghan and by Cory and Garroway. This approach provides displacement probability maps that emphasize, at long diffusion times, the characteristics of the apparent slow diffusing component. Examples from excised spinal cord, where the experimental conditions for which the q-space analysis of MR diffusion data was developed can be met or approached will be presented. Then examples from human MS patients, where q-space requirement for the short gradient pulse is clearly violated, are presented. In the excised spinal cord studies, this approach was used to study spinal cord maturation and trauma, and was found to be more sensitive than other conventional methods in following spinal cord degeneration in an experimental model of vascular dementia (VaD). High b-value q-space DWI was also recently used to study healthy and MS diseased human brains. This approach was found to be very sensitive to the disease load in MS, compared with other conventional MRI methods, especially in the normal appearing white matter (NAWM) of MS brains. Finally, the potential diagnostic capacity embedded in high b-value q-space analyzed diffusion MR images is discussed. The potentials and caveats of this approach are outlined and experimental data are presented that show the effect of violating the short gradient pulse (SGP) approximation on the extracted parameters from the q-space analysis.

Algorithms↗

Fuzzy ARTMAP and back-propagation neural networks based quantitative structure-property relationships (QSPRs) for octanol-water partition coefficient of organic compounds.

Quantitative structure-property relationships (QSPRs) for estimating the logarithm octanol/water partition coefficients, logK(ow), at 25 degrees C were developed based on fuzzy ARTMAP and back-propagation neural networks using a heterogeneous set of 442 organic compounds. The set of molecular descriptors were derived from molecular connectivity indices and quantum chemical descriptors calculated from PM3 semiempirical MO-theory. Quantum chemical input descriptors include average polarizability, dipole moments, exchange energy, total electrostatic interaction energy, total two-center energy, and ionization potential. The fuzzy ARTMAP/QSPR performed, for a logK(ow) range of -1.6 to 7.9, with average absolute errors of 0.03 and 0.14 logK(ow) for the overall data and test sets, respectively. The optimal 12-11-1 back-propagation/QSPR model, for the same range of logK(ow), exhibited larger average absolute errors of 0.23 and 0.27 logK(ow) for the test and validation data sets, respectively, over the same range of logK(ow) values. The present results with the fuzzy ARTMAP-based QSPR are encouraging and suggest that high performance logK(ow) QSPR that encompasses a wider range of chemical groups could be developed, following the present approach, by training with a larger heterogeneous data set.

Fuzzy Logic↗

A fuzzy ARTMAP-based quantitative structure-property relationship (QSPR) for the Henry's law constant of organic compounds.

Quantitative structure-property relationships (QSPRs) for estimating a dimensionless Henry's Law constant of organic compounds at 25 degrees C were developed based on a fuzzy ARTMAP and back-propagation neural networks using a heterogeneous set of 495 organic compounds. A set of molecular descriptors developed from PM3 semiempirical MO-theory and topological descriptors (second-order molecular connectivity index) were used as input parameters to the neural networks. Quantum chemical input descriptors included average molecular polarizability, dipole moments (total point charge, total hybridization, and total sum), ionization potential, and heat of formation. The fuzzy ARTMAP/QSPR correlated Henry's Law constant for -6.72 </= logH </= 2.87 with average absolute errors of 0.03 and 0.13 logH units for the overall data and the test set, respectively. The optimal 7-17-1 back-propagation/QSPR model was less accurate and exhibited larger average absolute errors of 0.28 and 0.27 logH units for the validation (recall) and test sets, respectively. The fuzzy ARTMAP-based QSPR was superior to the back-propagation and multiple linear regression/QSPR models for Henry's Law constant of organic compounds.

Journal Article↗

Inflammatory reaction in acute retinal artery occlusion: cytokine levels in aqueous humor and serum.

PURPOSE: To investigate the role of inflammation in acute retinal artery occlusion (RAO). METHODS: Levels of interleukin (IL)-6, IL-8, and tumor necrosis factor alpha (TNF-alpha) were measured in serum (n = 14) and aqueous humor (AqH) (n = 8) samples from patients with RAO. Findings were compared with 24 age- and disease-matched patients, 10 healthy subjects (serum), and 16 patients undergoing cataract surgery (AqH). RESULTS: Patients who arrived early (within 4-6 hours of occlusion) had higher serum IL-8 and IL-6 levels than controls; the IL-6 level in the AqH was lower than that of controls, while the IL-8 level was higher. In seven patients for whom both serum and AqH samples were available, serum IL-6 levels were higher than their corresponding AqH levels in most patients arriving within 10 hours of occlusion, and AqH IL-8 levels were higher than the corresponding serum levels in all but one. TNF-alpha levels were consistently higher in the serum than in the AqH at all time points. CONCLUSIONS: Serum IL-8 and IL-6 and AqH IL-8 are elevated immediately following acute RAO. The early local suppression of IL-6 may be related to ocular immune mechanisms.

Acute Disease↗