Biomedical subjects

X Zhao

Publications and source records attributed to X Zhao.

At least 127 records · Page 7Linked to original sources

PubMed2001

Aedes aegypti peroxidase gene characterization and developmental expression.

The functions of insect peroxidases include detoxification, stabilization of extracellular matrices, and possible involvement in insect immunity. The current study describes the isolation of a peroxidase gene, AePox, and its cDNA from the mosquito, Aedes aegypti. AePox codes for a protein that is homologous to various heme-peroxidases from vertebrates and invertebrates, with highest identity to Drosophila melanogaster peroxidase (62%). Sequence comparison identified several functionally and structurally conserved domains in the mosquito peroxidase, including a heme environment, a calcium binding site, and five possible disulfide bridges. These results imply that AePOX may likely have a similar structure and catalytic mechanism as those described for the mammalian myeloperoxidase superfamily. Expression studies demonstrate that AePox is transcribed in mosquito larvae and pupae, but not in adults, in ovaries, or in early embryos. However, AePOX protein is present in all mosquito stages and possibly has a maturation process that is similar to that of human myeloperoxidase. Unlike most human peroxidases, the AePox gene contains a TATA box and an ecdysone response element (EcRE).

Aedes↗

PubMed2001

p300/CBP-mediated p53 acetylation is commonly induced by p53-activating agents and inhibited by MDM2.

The tumor suppressor p53 is activated in response to many types of cellular and environmental insults via mechanisms involving post-translational modification. Here we demonstrate that, unlike phosphorylation, p53 invariably undergoes acetylation in cells exposed to a variety of stress-inducing agents including hypoxia, anti-metabolites, nuclear export inhibitor and actinomycin D treatment. In vivo, p53 acetylation is mediated by the p300 and CBP acetyltransferases. Overexpression of either p300 or CBP, but not an acetyltransferase-deficient mutant, efficiently induces specific p53 acetylation. In contrast, MDM2, a negative regulator of p53, actively suppresses p300/CBP-mediated p53 acetylation in vivo and in vitro. This inhibitory activity of MDM2 on p53 acetylation is in turn abrogated by tumor suppressor p19(ARF), indicating that regulation of acetylation is a central target of the p53-MDM2-p19(ARF) feedback loop. Functionally, inhibition of deacetylation promotes p53 stability, suggesting that acetylation plays a positive role in the accumulation of p53 protein in stress response. Our results provide evidence that p300/CBP-mediated acetylation may be a universal and critical modification for p53 function.

Acetylation↗

PubMed2001

A simple method of DNA extraction for Eimeria species.

A new, simple method is described for extracting DNA from coccidia (Eimeriidae) oocysts. In our hands this method works well for all Eimeria oocysts and, presumably, will work equally well for oocysts of other coccidia genera. This method combines the two steps of breaking oocyst and sporocyst walls, and dissolving the sporozoite membrane in one step. This greatly simplifies the currently used DNA extraction procedures for Eimeria species and overcomes the disadvantages of existing DNA extraction methods based on glass-bead grinding and sporozoite excystation procedures. Because all the procedures are done in a 1.5-ml microfuge tube, which minimizes the loss of DNA in the extraction procedures, this method is especially suitable for samples with small number of oocysts. In addition, this method directly lyses the oocyst and sporocyst walls as well as the sporozoite membrane in a continuous incubation; therefore, it does not require the sporozoites to be alive. The results of PCR experiments indicate that this method generates better quality of DNA than what the existing glass-bead grinding method does for molecular analysis, and is suitable for both large or small number (<10(2) oocysts) of living or dead oocyst samples.

Animals↗

PubMed2001

Immobilization of oligodeoxyribonucleotides with multiple anchors to microchips.

Facile modification of oligodeoxyribonucleotides is required for efficient immobilization to a pre-activated glass surface. This report presents an oligodeoxyribonucleotide which contains a hairpin stem-loop structure with multiple phosphorothioate moieties in the loop. These moieties are used to anchor the oligo to glass slides that are pre-activated with bromoacetamidopropylsilane. The efficiency of the attachment reaction was improved by increasing the number of phosphorothioates in the loop, as shown in the remarkable enhancement of template hybridization and single base extension through catalysis by DNA polymerase. The loop and stem presumably serve as lateral spacers between neighboring oligodeoxyribonucleotides and as a linker arm between the glass surface and the single-stranded sequence of interest. The oligodeoxyribonucleotides of this hairpin stem-loop architecture with multiple phosphorothioate moieties have broad application in DNA chip-based gene analysis.

Base Sequence↗

PubMed2001

First observation of the sigma(+)(c) baryon and a new measurement of the sigma(+)(c) mass.

Using data recorded with the CLEO II and CLEO II.V detector configurations at the Cornell Electron Storage Rings, we report the first observation and mass measurement of the Sigma(*+)(c) charmed baryon, and an updated measurement of the mass of the Sigma(+)(c) baryon. We find M(Sigma(*+)(c))-M(Lambda(+)(c)) = (231.0+/-1.1+/-2.0) MeV, and M(Sigma(+)(c))-M(Lambda(+)(c)) = (166.4+/-0.2+/-0.3) MeV, where the errors are statistical and systematic, respectively.

Journal Article↗

PubMed2001

Reduced susceptibility to ischemic brain injury and N-methyl-D-aspartate-mediated neurotoxicity in cyclooxygenase-2-deficient mice.

Cyclooxygenase-2 (COX-2), a prostanoid-synthesizing enzyme that contributes to the toxicity associated with inflammation, has recently emerged as a promising therapeutic target for several illnesses, ranging from osteoarthritis to Alzheimer's disease. Although COX-2 has also been linked to ischemic stroke, its role in the mechanisms of ischemic brain injury remains controversial. We demonstrate that COX-2-deficient mice have a significant reduction in the brain injury produced by occlusion of the middle cerebral artery. The protection can be attributed to attenuation of glutamate neurotoxicity, a critical factor in the initiation of ischemic brain injury, and to abrogation of the deleterious effects of postischemic inflammation, a process contributing to the secondary progression of the damage. Thus, COX-2 is involved in pathogenic events occurring in both the early and late stages of cerebral ischemia and may be a valuable therapeutic target for treatment of human stroke.

Animals↗

PubMed2001

Interactions among subunits of human Arp2/3 complex: p20-Arc as the hub.

The Arp2/3 complex is critical for nucleation and crosslinking of actin filaments. To gain insight into its subunit topology and assembly pathway, we systematically examined interactions among subunits of human Arp2/3 complex by yeast two-hybrid assays. It was shown that p20-Arc was able to interact with p21-Arc, p34-Arc, and p16-Arc, respectively. In contrast, p41-Arc only interacted with p20-Arc/p16-Arc heterodimer. In addition, we found that structural integrity was important for association between p20-Arc and p21-Arc, while the N-terminal half of p34-Arc was dispensable for its binding to p20-Arc. Our data suggest a key role of p20-Arc and a multistep pathway for the complex formation.

Actin-Related Protein 2↗

PubMed2001

Study of B Decays to Charmonium States: B-->eta(c)K and B --> chi(c0)K.

In a sample of 9.66x10(6)B&Bmacr; pairs collected with the CLEO detector we make the first observation of B decays to an eta(c) and a kaon. We measure branching fractions B(B+-->eta(c)K+) = (0.69(+0.26)(-0.21)+/-0.08+/-0.20)x10(-3) and B(B degrees -->eta(c)K degrees ) = (1.09(+0.55)(-0.42)+/-0.12+/-0.31)x10(-3), where the first error is statistical, the second is systematic, and the third is from the eta(c) branching fraction uncertainty. From these we extract the eta(c) decay constant in the factorization approximation, f(eta(c)) = 335+/-75 MeV. We also search for B decays to a chi(c0) and a kaon. No evidence for a signal is found and we set 90% C.L. upper limits: B(B+-->chi(c0)K+)<4.8x10(-4) and B(B degrees -->chi(c0)K degrees )<5.0x10(-4).

Journal Article↗

PubMed2001

Assignment of the 1511 cm(-1) UV resonance Raman marker band of hemoglobin to tryptophan.

New UV resonance Raman (UVRR) data provide convincing evidence that a characteristic 1511 cm(-1) band in the T - R difference spectra of hemoglobin is due to the overtone of the Trp W18 fundamental at 756 cm(-1). Measured isotope shifts for 2-H and 15-N substitution at the indole NH group are twice as large for the 1511 cm(-1) band as for W18, and the 1511 cm(-1) intensity scales with that of W18 in the difference spectrum. Moreover, the UVRR excitation profile of the 1511 cm(-1) band tracks that of another tryptophan band, W16. Both are redshifted in hemoglobin, relative to aqueous tryptophan, reflecting H bonding within a hydrophobic environment in the protein. The 2xW18 assignment had been thrown into question by the observation of remnant 1511 cm(-1) intensity in the T - R spectra of hemoglobin labeled with tryptophan-d(5), a substitution that shifts W18 over 50 cm(-1). However, reexamination of the data suggests that this remnant intensity may result from a subtraction artifact arising from the downshift of another difference band, W3, from 1549 cm(-1) in unlabeled protein to 1522 cm(-1) in labeled protein. Restoration of the 2xW18 assignment establishes that the 1511 cm(-1) difference band, which is a useful indicator of the extent of T-state formation in hemoglobin, arises from the same residue, Trpbeta37, that gives rise to essentially all of the T - R signal from tryptophan.

Adult↗

PubMed2001

Allelic loss and gain, but not genomic instability, as the major somatic mutation in primary hepatocellular carcinoma.

To identify genetic abnormalities in primary hepatocellular carcinoma (HCC), we performed microsatellite analysis (MSA) on 60 Chinese HCC specimens. Utilizing a semi-quantitative MSA and 292 highly polymorphic markers spanning all 22 autosomes, we found that somatic allelic imbalance (AI) occurred frequently in HCC. To evaluate the nature of the AI, comparative genomic hybridization was performed on 20 HCC specimens. The combined use of these two methods revealed frequent allelic loss on 17p, 9p21-p23, 4q, 16q21-q23.3, 13q, 8p21-p23, and 6q24-q27, whereas there was frequent allelic gain on 1q, 17q, and 8q24. The region with the highest incidence of genomic imbalance was 17p13 (65%), followed by 9p21-p23 (55%), 4q (35-51%), 16q21-q23.3 (52%), 17p12 (49%), 13q (39-46%), 8p21-p23 (41-45%), 8q24 (41%), and 1q32 (40%). In addition, aberrations of 19p13.3, 16p13.3, 13q33-q34, 9q13-31, and 7q were reported for the first time. The presence of a close correlation of 17p13 deletion with abnormalities of some other loci implies that 17p13 could play a crucial role in oncogenesis. Interestingly, microsatellite instability was rarely seen in our patients, in contrast to that observed in European HCC samples.

Adult↗

PubMed2001

Reactions of first-row transition metal ions with propargyl alcohol in the gas phase.

The gas-phase reactions with propargyl alcohol (PPA) of all the singly charged ions of the first-row transition metals, generated by laser ablation in an external ion source, were studied by Fourier transform ion cyclotron resonance mass spectrometry (FT-ICRMS.). The reactivities of the metal ions change irregularly across the periodic table, and the reactivity of each ion is a function of its electronic configuration and corresponding metal-oxygen (M-O) bond energies. The 10 metal ions were classified into three categories according to their reactivities: Sc(+), Ti(+) and V(+) are the most reactive ions which react with PPA to give many kinds of oxygen-rich products due to stronger M-O bonds; Fe(+), Co(+) and Ni(+) are less reactive; Cr(+), Mn(+), Cu(+) and Zn(+) are the most unreactive ions, due to the half and completely occupied valence electronic configurations. The order of reactivity is Ti(+) > V(+) > Sc(+) >> Co(+) > Fe(+) approximately Ni(+) > Zn(+) > Cr(+) approximately Mn(+) approximately Cu(+).

Journal Article↗

PubMed2001

Formation of binary alloy cluster ions from group-14 elements and cobalt and comparison with solid-state alloys.

By using laser ablation on mixtures of transition metal cobalt and group-14 elements, binary alloy cluster anions were produced while no binary alloy cluster cations were detected, and the homocluster cations of group-14 elements appeared at very low abundance. The differences between clustering abilities of germanium, tin and lead with cobalt are described, and the chemical bonds in the binary alloy cluster anions appear to indicate a transition from covalent to metal bonds. The cluster anion [CoPb10](-) appears in very high abundance (magic number), and an endohedral structure is proposed for this cluster. The cluster anion [CoPb12](-), also representing a magic number, probably has an icosahedral structure. Compared with solid-state Co/Ge binary alloys, the compositions of most binary alloy cluster anions are germanium-rich, in which the covalent bonds are predominant.

Journal Article↗

PubMed2001

Blood lead levels among children aged 1 to 5 years in Wuxi City, China.

The objective of this study was to determine mean blood lead levels and prevalence of elevated blood lead levels among 1- to 5-year-old children in Wuxi City, China. By use of a representative cross-sectional survey that included measurements of capillary blood lead, 1117 children aged 1-5 years were examined from October through December, 1997. The geometric mean blood lead level for children 1-5 years of age in Wuxi City was 8.2 microg/dL (0.40 micromol/L); 27.3% had blood lead levels >or=10 microg/dL and 1.0% had blood lead levels >or=20 microg/dL. Blood lead levels were significantly higher for males and for those living in industrial areas, particularly the Beitang, Mashan, and Xinqu districts. Residence in these districts and in the Jiaoqu industrialized district also increased the likelihood of an elevated blood lead level, with odds ratios ranging from 2.59 to 4.53. In conclusion, blood lead levels among Wuxi City children are high enough to be of concern, particularly in industrial areas. Further studies are needed to better define the extent of lead exposure among children in China. In addition, national standards for blood lead collection and measurement methods should be applied in China.

Child, Preschool↗

PubMed2001

Isolation and characterization of a novel cDNA, UBAP1, derived from the tumor suppressor locus in human chromosome 9p21-22.

PURPOSE: To clone the putative tumor suppressor gene(s) in a refined region at 9p21-22 undergoing loss of heterozygosity in nasopharyngeal carcinoma (NPC). METHODS: We systematically screened the expression patterns of 25 novel ESTs (expressed sequence tags) in a minimal common deleted region of 9p21-22 in NPC. One of these ESTs was found down-regulated in NPC. Subsequently, the corresponding gene sequence of this EST was established by cDNA cloning and RACE (rapid amplification of cDNA end) procedures. Furthermore, a mouse homologue of this gene was identified. The expression of this gene was examined using Northern blot or reverse transcription-polymerase chain reaction (RT-PCR) in various human and mouse tissues. A limited screen for mutation of coding sequence of this novel human gene was undertaken using RT-PCR and direct sequencing analysis. RESULTS: A novel gene was cloned. This gene is a new member of the UBA domain family, so we named it UBAPI for ubiquitin-associated protein 1 (HUGO Gene Nomenclature Committee-approved symbol). Northern blot and RT-PCR analysis demonstrate a ubiquitous pattern of gene expression in human and mouse tissues. The direct sequencing analysis of the coding region of hUBAP1 following RT-PCR failed to reveal any mutations in a preliminary screen of NPC cell line HNE1 and primary nasopharyngeal carcinoma samples. CONCLUSIONS: We cloned a novel gene UBAPI, which is highly conserved between human and mouse. Clearly, as a novel member of UBA domain protein family and taking its map location into account, a more extensive analysis is essential to establish whether subtle mutations are present in nasopharyngeal carcinomas.

Amino Acid Sequence↗

PubMed2001

Molecular phylogenies suggest the oocyst residuum can be used to distinguish two independent lineages of Eimeria spp in rodents.

Using plastid 23S and nuclear 18S rDNA partial sequences for 16 Eimeria species from rodents, we compared their molecular phylogenetic inferences with morphological features and host specificity. The 16 ingroup taxa included Eimeria species which had different morphological features, but were from the same host genus or species, and species which had similar morphological features, but were from different host families or genera. Molecular phylogenies grouped the 16 rodent Eimeria species into two major lineages with high bootstrap support: lineage A included E. albigulae (from Neotoma), E. arizonensis (Peromyscus, Reithrodontomys), E. chaetodipi (Chaetodipus), E. chobotari (Dipodomys), E. dipodomlysis (Dipodomys), E. leucopi (Peromyscus), E. onychomysis (Onychomys), E. peromysci (Peromyscus) and E. reedi (Perognathus); and lineage B included E. falciformis (Mus), E. langebarteli (Peromyscus, Reithrodontomys), E. nieschulzi (Rattus), E. papillata (Mus), E. scholtysecki (Dipodomys), E. separata (Rattus) and E. sevilletensis (Onychomys). Examination of the morphological features of all 16 Eimeria species indicates that only the oocyst residuum shows a clear correlation to the phylogenetic relationships determined by the molecular data. Species in lineage A all contain one (or more) oocyst residuum in their sporulated oocysts, while species in lineage B lack an oocyst residuum in their sporulated oocysts. Considering that the host range of the Eimeria species used in this study includes nine genera in two families and that each eimeriid lineage contains species from both families, it seems likely that the two Eimeria lineages split before their host families diverged.

Animals↗

PubMed2001

RB activation and repression of C-MYC transcription precede apoptosis of human prostate epithelial cells.

OBJECTIVES: The retinoblastoma gene (Rb) encodes a transcriptional regulatory protein that functions in the regulation of cellular growth, differentiation, and survival. Many of the target genes of Rb with respect to growth regulation and differentiation have been identified. However, the identities of the Rb target genes involved in the regulation of cell survival and cell death (apoptosis) are unknown. We sought to determine whether the c-myc oncogene, a known target of Rb activity in cell cycle control, is also recruited in an apoptotic pathway uniquely regulated by Rb in prostate epithelial cells. METHODS: We previously described a cell culture model to study the apoptosis of prostate cancer cells in which the human prostate cancer line, LNCaP, will undergo apoptosis after inducible expression and activation of the alpha isozyme of protein kinase C (PKC) or after exposure to low concentrations of the PKC activator TPA. Rb protein and c-myc mRNA and protein were evaluated in the Rb+/+ LNCaP and in the Rb-/- DU145 prostate cancer cells. RESULTS: TPA-induced apoptosis in LNCaP cells was preceded by the rapid depletion of c-myc mRNA. The DU145 cultures were resistant to TPA-induced apoptosis and the c-myc mRNA levels remained elevated. The examination of Rb protein in the LNCaP cells revealed rapid dephosphorylation preceding both c-myc protein depletion and apoptosis. Additionally, pretreatment of LNCaP cells with staurosporine, a potent inhibitor of several isozymes of the PKC family, inhibited apoptosis in these cells and completely blocked activation of Rb and repression of c-myc. CONCLUSIONS: On the basis of these studies, we suggest that induction of PKC-mediated apoptosis of Rb+/+ prostate cancer cells occurs by means of an intracellular pathway that involves the activation of Rb and repression of c-myc transcription.

Apoptosis↗

PubMed2001

Modulation of tetrodotoxin-resistant sodium channels by dihydropyrazole insecticide RH-3421 in rat dorsal root ganglion neurons.

The effects of the dihydropyrazole insecticide RH-3421 on the retrodotoxin-resistant (TTX-R) voltage-gated sodium channels in rat dorsal root ganglion (DRG) neurons were studied using the whole-cell patch clamp technique. RH-3421 at 10 nM to 1 microM completely blocked action potentials. The sodium currents were irreversibly suppressed by 1 microM RH-3421 in a time- and a dose-dependent manner and the IC50 value of RH-3421 was estimated to be 0.7 microM after 10 min of application. RH-3421 blocked the sodium currents to the same extent over the entire range of test potentials. The sodium conductance-voltage curve was not shifted along the voltage axis by 1 microM RH-3421 application In contrast, both fast and slow steady-state sodium channel inactivation curves were shifted in the hyperpolarizing direction in the presence of 1 microM RH-3421. It was concluded that RH-3421 bound to the resting and inactivated sodium channels to cause block with a higher affinity for the latter state.

Action Potentials↗

PubMed2001

Mg@C72 MNDO/d evaluation of the isomeric composition.

Temperature development of the relative stabilities of isomers of Mg@C72 (which has not yet been isolated) is computed using the recently introduced MNDO/d method. Four isomers originally considered for the Ca@C72 case are treated: one isolated-pentagon-rule (IPR) structure, two structures with a pair of adjacent pentagons, and one cage with a heptagon. The IPR structure comes as the lowest in MNDO/d potential energy, being rather closely followed by the two structures with a pentagon-pentagon pair. On the other hand, the structure with a heptagon is located too high in potential energy to be of any experimental significance. The entropy contributions are evaluated by the MNDO/d-based partition functions so that the relative concentrations can be treated accordingly. The computations suggest that if Mg@C72 is isolated, it should be a mixture of either two or three isomers. The prediction depends on temperature prehistory. If preparation takes place at temperatures of approximately 1000 K, two isomers should be produced. If temperatures are increased to approximately 2000 K, there will already be three isomers with significant relative concentrations. The study supplies a further interesting example of the profound role of enthalpy-entropy interplay in stabilities of isomeric fullerenic structures.

Carbon↗