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William Clegg

Publications and source records attributed to William Clegg.

At least 19 recordsLinked to original sources
PubMed2003

Synthesis and crystal structures of 2-substituted-2-phenylsulfonyloxiranes: evidence for a generalised anomeric effect in 2-phenylsulfonyloxiranes.

Crystal structures are reported for three new sulfonyloxiranes 5, 6b and 7. Taken together with the structures previously reported for the two sulfonyloxiranes 1 and 2, these structures provide evidence of the existence of a generalised anomeric effect in 2-phenylsulfonyloxiranes, accounting for the substantial bond asymmetry in the oxirane ring, and thus for the reactivity of these oxiranes towards nucleophiles.

Journal Article↗
PubMed2003

An alkoxide cluster with 18 Li+ ions encapsulating two borate anions, [((t)BuO)12Li18(BO3)2].

The title compound, bis(borato)dodeca(tert-butoxo)octadecalithium, [Li(18)(BO(3))(2)(C(4)H(9)O)(12)], is formulated conveniently as [(((t)BuOLi)(3)(Li(3)BO(3)))(2)((t)BuOLi)(6)]. A central 12-membered ring and two outer six-membered rings are formed by alternating Li(+) cations and alkoxide O atoms. Sandwiched between the central ring and each of the outer rings is a planar array of three further Li(+) cations surrounding a [BO(3)](3-) anion. Thus, the molecule consists of a cationic [Li(18)(O(t)Bu)(12)](6+) cage encapsulating two borate anions. This compound is the first example of a structurally characterized polynuclear lithium borate, and a rare case of a lithium alkoxide cage with nuclearity greater than eight. All the alkoxide ligands are triply bridging, and the lithium ions have trigonal-planar, trigonal-pyramidal and fourfold coordination, all with major distortions from regular coordination geometry.

Journal Article↗
PubMed2003

Minor groove site coordination of adenine by platinum group metal ions: effects on basicity, base pairing, and electronic structure.

Dithioether- or diamine-tethered adenine derivatives react with Pt(II), Pd(II), and Rh(III) ions to give N3-coordinated complexes of the types [MCl(SSN)](+) (M = Pt or Pd), [RhCl(3)(SSN)], or [RhCl(3)(NNN)] (where SSN = 1-(N9-adenine)-3,6-dithia-heptane or 1-(N9-adenine)-4,7-dithia-octane; NNN = ethylenediamine-N,9-ethyladenine). Single-crystal X-ray analysis confirms the nature of the metal-nucleobase interaction and highlights a conserved intermolecular hydrogen-bonding motif for all the complexes, irrespective of the metal-ion geometry. Coordination significantly reduces the basicity of the adeninyl group, as indicated by a pK(a) value of -0.16 for [PtCl(N3-1-(N9-adenine)-3,6-dithia-heptane)]BF(4), compared to a pK(a) value of 4.2 for 9-ethyladenine. The site of proton binding, N1 or N7, could not be unambiguously assigned from the (1)H NMR data, because of the similar effect on the chemical shifts of the H2 and H8 protons. Density functional calculations at the BP-LACVP level suggest N1 as the site of protonation for this type of complex. This is in contrast to the N7-protonation reported for [Pt(dien)(N3-6,6',9-trimethyladenine)](2+), as reported elsewhere (Meiser et al., Chem.-Eur. J. 1997, 3, 388). However, further electronic structure calculations in the gas phase reveal that the preferred site for protonation for N3-bound complexes is conformationally dependent. N3 coordination was also found to reduce the extent of base pairing between adenine and thymine in dimethylsulfoxide for the self-complementary complex [PtCl(L3)](+) (L3 = 1-(N9-adenine)-3,6-dithia-9-(N1-thymine)nonane), compared to that for the uncomplexed ligand.

Adenine↗
PubMed2002

A homologous series of alkaline earth phosphanides: syntheses, crystal structures, and unusual dynamic behavior of (THF)(n)M[P(CH(SiMe(3))(2))(C(6)H(4)-2-CH(2)NMe(2))](2) (M = Mg, Ca, Sr, Ba).

The secondary phosphine R(Me(2)NCH(2)-2-C(6)H(4))PH reacts with Bu(2)Mg to give the homoleptic complex Mg[PR(C(6)H(4)-2-CH(2)NMe(2))](2) (1) [R = CH(SiMe(3))(2)]. The analogous heavier alkaline earth metal complexes (THF)(n)Ae[PR(C(6)H(4)-2-CH(2)NMe(2))](2) [Ae = Ca (2), n = 0; Ae = Sr (3), Ba (4), n = 1] have been synthesized by metathesis reactions between K[PR(C(6)H(4)-2-CH(2)NMe(2))] and 0.5 equiv of the respective alkaline earth metal diiodide. Compounds 1-4 have been characterized by X-ray crystallography and multielement NMR spectroscopy. In the solid state, compounds 1-4 are monomeric, complexes 1 and 2 adopting a distorted tetrahedral geometry and complexes 3 and 4 adopting a distorted square pyramidal geometry (1: orthorhombic, P2(1)2(1)2(1), a = 11.413(3) A, b = 12.072(3) A, c = 32.620(11) A, Z = 4. 2: monoclinic, P2(1)/c, a = 9.5550(4) A, b = 17.4560(7) A, c = 24.5782(10) A, beta = 91.673(2) degrees, Z = 4. 3: monoclinic, C2/c, a = 15.0498(9) A, b = 13.0180(8) A, c = 24.3664(14) A, beta = 104.593(2) degrees, Z = 4. 4: monoclinic, C2/c, a = 15.2930(10) A, b = 13.0326(9) A, c = 24.6491(17) A, beta = 105.542(2) degrees, Z = 4). In toluene solution, compounds 2-4 are subject to dynamic processes which are attributed to a monomer-dimer equilibrium for which bridge-terminal exchange of the phosphanide ligands in the dimer may be frozen out at low temperatures.

Journal Article↗
PubMed2002

Metallocene-DNA: synthesis, molecular and electronic structure and DNA incorporation of C5-ferrocenylthymidine derivatives.

Ferrocenylthymidine derivatives have been prepared by Pd-catalysed cross-coupling between ethynylferrocene or vinylferrocene and 5-iodo-2'-deoxyuridine. In the latter case a mixture of trans (2a) and gem (2b) isomers was obtained. The cis-vinylferrocenyl (2c), and ethylferrocenyl (3) derivatives were obtained by catalytic hydrogenation of ethynylferrocenyl-dT (1a), and 2c respectively. Single-crystal X-ray data for 1a, the ferrocenyl-2'furano-pyrimidone 1b, and 2a show that the nucleobase is essentially co-planar with the substituted Cp ring of the metallocene. The selective reduction of the linkage between the ferrocenyl and thymidine moieties, from -C identical to C- to -CH2CH2-, causes a shift in the reduction potential of -124 mV. DFT calculations for the one-electron oxidised species indicate that the diminished conjugation reduces the spin transfer onto the bridging C2 group, but has less effect on the extent transferred to the nucleobase from the ferrocenyl group. Compound 1a was incorporated site-specifically into DNA oligonucleotides by using automated solid-phase methods. However, some interconversion of 1a-->1b occurs, even under rapid mild conditions of deprotection.

Base Pairing↗
PubMed2002

Structural chemistry of arachno-nonaboranes.

Single-crystal conventional-tube and synchrotron X-ray diffraction studies of the anions in [NMe(4)][arachno-B(9)H(12)-4,8-Br(2)] 1 and K[arachno-B(9)H(14)] 2, and also of the series of adducts [arachno-B(9)H(13)-4-L], where L is P(CCH)(3) (3), NHEt(2) (4), NC(5)H(5) (5), or NH(2)CH(2)Ph (6), are reported. Structural studies of 1-6, determined at low temperatures, located all atoms, including bridging and endo-terminal hydrogen atoms. The basic boron-hydride clusters of these, and of all the other known species with the arachno nine-vertex i-nonanborane geometry reported in the literature, are isostructural and feature three bridging and two endo-terminal hydrogen atoms on the open face. This arrangement is different from that previously reported for Cs[arachno-B(9)H(14)] 7 and for [arachno-B(9)H(13)-4-(NCMe)] 9. However, a new X-ray diffraction data set and refinement experimentally confirm the [3 x mu-H, 2 x endo] arrangement for 9 also. The experimental results for 1-6 support recently reported calculations for [B(9)H(14)](-), which predict both the structures and the (11)B NMR chemical shifts. These conclusions are also supported by calculations for 3, 4, and 9 and also for the [arachno-B(9)H(13)-4-(NCS)](-) anion in [NMe(4)][B(9)H(13)(NCS)] 8.

Journal Article↗
PubMed2002

Diverse evolution of [[Ph(2)P(CH(2))(n)PPh(2)]Pt(mu-S)(2)Pt[Ph(2)P(CH(2))(n)PPh(2)]] (n = 2, 3) metalloligands in CH(2)Cl(2).

The nucleophilicity of the [Pt(2)S(2)] core in [[Ph(2)P(CH(2))(n)PPh(2)]Pt(mu-S)(2)Pt[Ph(2)P(CH(2))(n)PPh(2)]] (n = 3, dppp (1); n = 2, dppe (2)) metalloligands toward the CH(2)Cl(2) solvent has been thoroughly studied. Complex 1, which has been obtained and characterized by X-ray diffraction, is structurally related to 2 and consists of dinuclear molecules with a hinged [Pt(2)S(2)] central ring. The reaction of 1 and 2 with CH(2)Cl(2) has been followed by means of (31)P, (1)H, and (13)C NMR, electrospray ionization mass spectrometry, and X-ray data. Although both reactions proceed at different rates, the first steps are common and lead to a mixture of the corresponding mononuclear complexes [Pt[Ph(2)P(CH(2))(n)PPh(2)](S(2)CH(2))], n = 3 (7), 2 (8), and [Pt[Ph(2)P(CH(2))(n)PPh(2)]Cl(2)], n = 3 (9), 2 (10). Theoretical calculations give support to the proposed pathway for the disintegration process of the [Pt(2)S(2)] ring. Only in the case of 1, the reaction proceeds further yielding [Pt(2)(dppp)(2)[mu-(SCH(2)SCH(2)S)-S,S']]Cl(2) (11). To confirm the sequence of the reactions leading from 1 and 2 to the final products 9 and 11 or 8 and 10, respectively, complexes 7, 8, and 11 have been synthesized and structurally characterized. Additional experiments have allowed elucidation of the reaction mechanism involved from 7 to 11, and thus, the origin of the CH(2) groups that participate in the expansion of the (SCH(2)S)(2-) ligand in 7 to afford the bridging (SCH(2)SCH(2)S)(2-) ligand in 11 has been established. The X-ray structure of 11 is totally unprecedented and consists of a hinged [(dppp)Pt(mu-S)(2)Pt(dppp)] core capped by a CH(2)SCH(2) fragment.

Journal Article↗
PubMed2002

Kinetic evidence for intramolecular proton transfer between nickel and coordinated thiolate.

The complexes [Ni(YR)(triphos)]BPh(4) (Y = S, R = Ph or Et or Y = Se, R = Ph; triphos = (Ph(2)PCH(2)CH(2))(2)PPh) have been prepared and characterized, and the X-ray crystal structure of [Ni(SPh)(triphos)]BPh(4) has been solved. In MeCN, [Ni(YR)(triphos)](+) are protonated by [lutH](+) (lut = 2,6-dimethylpyridine) to give [Ni(YHR)(triphos)](2+). Studies on the kinetics of these equilibrium reactions reveal an unexpected difference in the reactivities of [Ni(SPh)(triphos)](+) and [Ni(SEt)(triphos)](+). In both cases, the reactions exhibit a first-order dependence on the concentration of complex. When R = Ph, the dependence on the concentrations of [lutH(+)] and lut is given by k(obs) = k(1)(Ph)[lutH(+)] + k(-1)(Ph)[lut], which is typical of an equilibrium reaction where k(1)(Ph) and k(-1)(Ph) correspond to the forward and back reactions, respectively. Analogous behavior is observed for [Ni(SePh)(triphos)](+). However, for [Ni(SEt)(triphos)](+), the kinetics are more complicated, and k(obs) = (k(1)k(2)[lutH(+)] + (k(-2) + k(2)))/(k(1)[lutH(+)] + k(-1)[lut]), which is indicative of a mechanism involving two coupled equilibria in which the initial protonation of the thiolate is followed by a unimolecular equilibrium reaction that is assumed to involve the formation of an eta(2)-EtS-H ligand. The difference in reactivity between the complexes with alkyl and aryl thiolate ligands is a consequence of the (Ni(triphos))(2+) site "leveling" the basicities of these ligands. The pK(a)'s of the PhSH and EtSH constituents coordinated to the (Ni(triphos))(2+) are 16.0 and 14.6, respectively, whereas the difference in pK(a)'s of free PhSH and EtSH differ by ca. 4 units. The pK(a) of [Ni(SeHPh)(triphos)](+) is 14.4. The more strongly sigma-donating EtS ligand makes the (Ni(triphos))(2+) core sufficiently electron-rich that the basicities of the sulfur and nickel in [Ni(SEt)(triphos)](+) are very similar; therefore, the proton serves as a bridge between the two sites. The relevance of these observations to the proposed mechanisms of nickel-based hydrogenases is discussed.

Crystallography, X-Ray↗
PubMed1999

Oxidative-Addition Reactions of Diiodine to Dinuclear Rhodium Pyrazolate Complexes.

The pyrazolato (Pz) rhodium(I) complexes [{Rh(&mgr;-Pz)(CO)(L)}(2)] (L = CNBu(t), P(OMe)(3), PMe(2)Ph, P(OPh)(3), P(p-tolyl)(3)) result from the reaction of [{Rh(&mgr;-Pz)(CO)(2)}(2)] with the appropriate L ligand in a trans:cis ratio ranging from 60:40 (L = CNBu(t)) to 95:5 (L = P(p-tolyl)(3)). The pure trans isomers add 1 molar equiv of diiodine to give the dirhodium(II) complexes [{Rh(&mgr;-Pz)(I)(CO)(L)}(2)] (L = CNBu(t) (6), P(OMe)(3) (7), PMe(2)Ph (8), P(OPh)(3) (9)). These complexes incorporate two iodide ligands trans to the rhodium-rhodium bond, as substantiated by the X-ray structure for 7, while the complex [(P{p-tolyl}(3))(CO)(I)Rh(&mgr;-Pz)(2)(&mgr;-CO)Rh(I)(P{p-tolyl}(3))] (10) contains a bridging ketonic CO ligand, due to the insertion of a terminal CO into the metal-metal bond. The metal-metal bond formation involves a 2e oxidation, since identical compounds (6-9) are obtained by oxidation with [Fe(Cp)(2)](PF(6)) followed by addition of potassium iodide. Further reactions of the dirhodium(II) complexes 6-9 with diiodine leading to the metal-metal rupture are electrophilic additions, as exemplified by the reactions with the positive iodine complex [I(Py)(2)](+). They start at the "endo site" (the metal-metal bond) if it is sterically accessible to the electrophile, to give directly the dirhodium(III) complexes [{Rh(&mgr;-Pz)(I)(CO)(L)}(2)(&mgr;-I)](+) (L = CNBu(t), CO). Otherwise, as for the complexes with P-donor ligands, abstraction of a iodide ligand trans to the metal-metal bond (the "exo site") occurs first, to give the dirhodium(II) cationic complexes [(PR(3))(CO)(I)Rh(&mgr;-Pz)(2)Rh(CO)(PR(3))](+) and triiodide. These react again with diiodine to give dirhodium(III) complexes [{Rh(&mgr;-Pz)(I)(CO)(PR(3))}(2)(&mgr;-I)](+) similar to those described above, but with triiodide or pentaiodide as counterion, as substantiated by the X-ray structure of [{Rh(&mgr;-Pz)(I)(CO)(PMe(2)Ph)}(2)(&mgr;-I)]I(5) (18). The diiridium(II) complexes [{Ir(&mgr;-Pz)(I)(CO)(PR(3))}(2)] (PR(3) = P(OPh)(3), PMe(2)Ph) also react with diiodine to give the cationic diiridium(III) complexes [{Ir(&mgr;-Pz)(I)(CO)(PR(3))}(2)(&mgr;-I)]I(3) through a reaction pathway involving the "exo site", while no reaction is observed for [{Ir(&mgr;-Pz)(I)(CO)(2)}(2)]. Finally, replacement of a carbonyl ligand in [{Rh(&mgr;-Pz)(I)(CO)(L)}(2)(&mgr;-I)](+) (L = CNBu(t), CO) by iodide gives the compounds [(CO)(L)(I)Rh(&mgr;-Pz)(2)(&mgr;-I)Rh(I)(2)(L)].

Journal Article↗