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Biomedical subjects

U Sarkar

Publications and source records attributed to U Sarkar.

At least 19 recordsLinked to original sources

Analyzing toxicity through electrophilicity.

The toxicological structure-activity relationships are investigated using conceptual DFT based descriptors like global and local electrophilicities. In the present work the usefulness of electrophilicity in predicting toxicity of several polyaromatic hydrocarbons (PAH) is assessed. The toxicity is expressed through biological activity data (pIC50) defined as molar concentration of those chemicals necessary to displace 50% of radiolabeled tetrachlorodibenzo-p-dioxin (TCDD) from the arylhydrocarbon (Ah) receptor. The experimental toxicity values (pIC50) for the electron acceptor toxin like polychlorinated dibenzofurans (PCDF) are taken as dependent variables and the DFT based global descriptor electrophilicity index (omega) is taken as independent variable in the training set. The same model is then tested on a test set of polychlorinated biphenyls (PCB). A good correlation is obtained which vindicates the importance of these descriptors in the QSAR studies on toxins. These toxins act as electron acceptors in the presence of biomolecules whereas aliphatic amines behave as electron donors some of which are also taken into account for the present work. The toxicity values of the aliphatic amines in terms of the 50% inhibitory growth concentration (IGC50) towards ciliate fresh-water protozoa Tetrahymena pyriformis are considered. Since there is no global nucleophilicity we apply local nucleophilicity (omegamax+) as the descriptor in this case of training set. The same regression model is then applied to a test set of amino alcohols. Although the correlation is very good the statistical analysis reflects some cross validation problem. As a further check the amines and amino alcohols are used together to form both the training and the test sets to provide good correlation. It is demonstrated that the toxicity of several toxins (both electron donors and acceptors) in the gas and solution phases can be adequately explained in terms of global and local electrophilicities. Amount of charge transfer between the toxin and the biosystem, simulated as nucleic acid bases and DNA base pairs, indicates the importance of charge transfer in the observed toxicity. The major strength of the present analysis vis-à-vis the existing ones rests on the fact that it requires only one descriptor having a direct relationship with toxicity to provide a better correlation. Importance of using the information from both the toxin and the biosystem is also analyzed.

Animals↗

Careful scrutiny of the philicity concept.

The philicity concept [J. Phys. Chem. A 2003, 107, 4973] is put in proper perspective. In the present work we analyze different physicochemical problems using philicity. It provides satisfactory results in all such cases. We also compare the relative electro(nucleo)philicity with philicity to show that philicity is better than relative electro(nucleo)philicity when the intermolecular reactivity trends are considered and there is hardly any preference of one above the other as far as the intramolecular reactivities are concerned. On the contrary, the philicity concept has some advantages over the other concept.

Journal Article↗

Estimating fugitive bioaerosol releases from static compost windrows: feasibility of a portable wind tunnel approach.

An assessment of the fugitive release of bioaerosols from static compost piles was conducted at a green waste composting facility in South East England; this representing the initial stage of a programme of research into the influence of process parameters on bioaerosol emission flux. Wind tunnel experiments conducted on the surface of static windrows generated specific bioaerosol emission rates (SBER2s) at ground level of between 13 and 22 x 10(3) cfu/m2/s for mesophilic actinomycetes and between 8 and 11 x 10(3)cfu/m2/s for Aspergillus fumigatus. Air dispersion modelling of these emissions using the SCREEN3 air dispersion model in area source term mode was used to generate source depletion curves downwind of the facility for comparative purposes.

Actinomycetaceae↗

Verifiable model of neutrino masses from large extra dimensions

We propose a new scenario of neutrino masses with a Higgs triplet (xi(++),xi(+),xi(0)) in a theory of large extra dimensions. Lepton number violation in a distant brane acts as the source of a very small trilinear coupling of xi to the standard Higgs doublet in our brane. Small realistic Majorana neutrino masses are naturally obtained with the fundamental scale M(*) approximately O(1) TeV, foretelling the possible discovery of xi (m(xi) less, similarM(*)) at future colliders. Decays of xi(++) into same-sign dileptons are fixed by the neutrino mass matrix. Observation of &mgr;-e conversion in nuclei is predicted.

Journal Article↗

Biochemical profile of erythrocyte membrane of jaundiced neonates.

Studies in newborn humans have demonstrated alteration in the lipid, phospholipid and cholesterol content when compared with age-matched control. Membrane bound (Na+ + K+)ATPase activity is found to be significantly increased in jaundiced neonates. Alteration in membrane permeability characteristics in jaundiced neonates causes severe microenvironmental changes in red blood cell profile.

Birth Weight↗

Jaundice in new born and erythrocyte and plasma antioxidant defence system.

Alteration in the antioxidant defence mechanism of erythrocytes with rise in serum unconjugated bilirubin level in neonates has been observed. The cellular glutathione level was found to be significantly low. The activity of glutathione reductase in erythrocyte increased to combat the cellular loss of reduced glutathione in neonatal jaundice. In plasma fraction the level of glutathione (reduced) was found to be significantly higher with lowering of glutathione reductase level. Glutathione peroxidase was reduced in cellular level whereas an increase was observed in plasma fraction. Gamma glutamyl transpeptidase level was barely detectable in erythrocyte whereas an increase was observed in plasma fraction. In all the cases erythrocyte G-6-PDH activity level was found within normal limits.

Antioxidants↗

Pharmacoepidemiology of drug use at two primary health care centres in northern India.

There is a consensus amongst most health care centers that limited drugs should be available to meet most requirements at the first tier of health care. However, few studies have addressed themselves to determining this. The objectives of this study were to provide a description of the availability and prescription of modern pharmaceuticals at 2 selected Primary Health Care Centres in Northern India. The main results of this study are: documentation of age/sex of patients on prescriptions was not kept in all cases; prescribing by both generic/brand names was observed with generics predominating; most patients received 0-2 drugs; dosages were not specified in 10% of the cases, duration not specified in 30% of the cases, and dosage form not indicated in 30% of all drugs prescribed; treatment was sought for problems pertaining to gastrointestinal, respiratory, dermatological and musculoskeletal systems; and the most prescribed drugs were analgesics, antipyretics, antimicrobials, hematinics and antihistaminics.

Ambulatory Care Facilities↗