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Biomedical subjects

Thomas Hahn

Publications and source records attributed to Thomas Hahn.

5 recordsLinked to original sources
PubMed2006

Molecular phylogeny and taxonomic revision of the sportive lemurs (Lepilemur, Primates).

BACKGROUND: The number of species within the Malagasy genus Lepilemur and their phylogenetic relationships is disputed and controversial. In order to establish their evolutionary relationships, a comparative cytogenetic and molecular study was performed. We sequenced the complete mitochondrial cytochrome b gene (1140 bp) from 68 individuals representing all eight sportive lemur species and most major populations, and compared the results with those obtained from cytogenetic studies derived from 99 specimens. RESULTS: Interspecific genetic variation, diagnostic characters and significantly supported phylogenetic relationships were obtained from the mitochondrial sequence data and are in agreement with cytogenetic information. The results confirm the distinctiveness of Lepilemur ankaranensis, L. dorsalis, L. edwardsi, L. leucopus, L. microdon, L. mustelinus, L. ruficaudatus and L. septentrionalis on species level. Additionally, within L. ruficaudatus large genetic differences were observed among different geographic populations. L. dorsalis from Sahamalaza Peninsula and from the Ambanja/Nosy Be region are paraphyletic, with the latter forming a sister group to L. ankaranensis. CONCLUSION: Our results support the classification of the eight major sportive lemur taxa as independent species. Moreover, our data indicate further cryptic speciation events within L. ruficaudatus and L. dorsalis. Based on molecular data we propose to recognize the sportive lemur populations from north of the Tsiribihina River, south of the Betsiboka River, and from the Sahamalaza Peninsula, as distinct species.

Animals↗
PubMed2006

A novel estrogen sensor based on recombinant Arxula adeninivorans cells.

A novel yeast cell-based assay was developed for the detection of estrogenic activity in wastewater. Recombinant Arxula adeninivorans strains were engineered to co-express the human estrogen receptor alpha (hERalpha) and a Klebsiella-derived phytase (phyK) reporter gene under the control of an A. adeninivorans-derived glucoamylase (GAA) promoter which had been modified by the insertion of estrogen-responsive elements (EREs). In the presence of estrogenic compounds, hERalpha dimerizes and binds to the estrogen. Reporter gene expression is induced by subsequent binding of the hERalpha-dimer/estrogen complex to estrogen responsive elements (ERE) in the promoter. The insertion of different numbers of EREs in three alternative promoter positions and its effect on reporter gene expression were assessed. In one of the constructs, a detection limit of 5 ng l(-1) and a determination limit of 10 ng l(-1) for 17beta-estradiol-like activity was achieved. The photometric assay used enabled estrogen determination in sewage samples within 30 h.

Biosensing Techniques↗
PubMed2005

Bedside estimation of the glomerular filtration rate in hospitalized elderly patients.

AIMS: To evaluate the quality of bedside estimation of glomerular filtration rate (GFR) in hospitalized elderly patients. METHODS: We evaluated common estimators of GFR in 29 women and 32 men aged 60 and older hospitalized in a geriatric ward: creatinine clearance (CCR), the Cockcroft-Gault formula (CG), the modification of diet in renal disease formula (MDRD), Baracskay formula (BAR), and a newly developed formula derived recently by us (GCM). Inulin clearance (CINU) was used to assess GFR. Exclusion criteria were mental illness and urinary incontinence. RESULTS: According to Bland and Altman accuracy and precision of all estimators were low and there was an underestimation of actual GFR: CCR 38.9 ml/min; CG 39.7 ml/min; MDRD 19.8 ml/min; BAR 34.0 ml/min, and GCM: 24.7 ml/min. The accuracy and precision of all methods were even lower in patients with a GFR of >90 ml/min and in patients with diabetes. In receiver-operating characteristics (ROC analysis) all formulas were superior to serum creatinine and overall MDRD disclosed the best results in detecting both a GFR of <90 ml/min and <60 ml/min. CONCLUSIONS: In general, estimation errors are large in an acute care setting. However, formula estimation is clearly superior to serum creatinine and CCR. MDRD gave the best results but may be replaced by the more simple CG and GCM formulas, whereas BAR was inferior.

Aged↗
PubMed2004

Photon migration in Raman spectroscopy.

Monte Carlo simulation has been applied to study time-resolved Raman and Tyndall photon migration in opaque samples under isotropic and forward scattering conditions. For isotropic scattering, Raman and Tyndall intensities are predicted to decay according to t((1-n)) and t(-n), respectively, where the value of n depends on the ratio of the optical collection aperture to the mean scattering length. The simulation correctly reproduced the analytical results of n = 3/2 and n = 5/2 for a point source in infinite and semi-infinite media, respectively. In addition the model can be used to relate the time at which a Raman photon exits the sample to the mean depth at which it was generated. This could provide a useful tool for depth profiling the chemical composition of turbid systems, and hence be a useful addition to the established array of photon-migration techniques. The model was applied to analyze experimentally observed Raman and Tyndall decay profiles from powdered trans-stilbene. The transport mean free path (l(t)) was calculated to be approximately 400 microm, which was significantly larger than the particle sizes present in the sample (approximately 10-100 microm). This implies that the particles were highly forward scattering, as would be expected for this size range. When highly anisotropic scattering was introduced into the model a much more reasonable scattering length (l(s) approximately 40 microm) was obtained. Finally, a simple analytical model was developed that gives the correct relationship between the Raman and Tyndall decay exponents for isotropic scattering. To the best of our knowledge this work represents the first detailed study of Raman photon migration under time-resolved conditions.

Journal Article↗