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Biomedical subjects

S Dasgupta

Publications and source records attributed to S Dasgupta.

At least 145 records · Page 8Linked to original sources
PubMed1988

Effect of cadmium on protein-ascorbate metabolism in the protein restricted rat.

Daily administration of cadmium chloride (0.3 mg/100 g of body weight) subcutaneously for 14 days in adult Sprague-Dawley rats led to a decrease in the concentration of protein and ascorbic acid in the liver, plasma and brain regions both in normal protein and in protein restricted dietary condition. Therefore, it might be presumed that the changes in protein and ascorbic acid in both the experimental animal groups alters the metabolic state of the brain affecting neuronal activity.

Animals↗
PubMed1987

Multiple mechanisms for initiation of ColE1 DNA replication: DNA synthesis in the presence and absence of ribonuclease H.

A transcript (RNA II) of plasmid ColE1 that hybridizes with the template DNA is cleaved by RNAase H and used as a primer by DNA polymerase I. However, the plasmid can replicate in bacteria lacking both enzymes, apparently using a different mechanism of initiation of replication. Here we report in vivo and in vitro studies on initiation of DNA replication in the presence or absence of either or both enzymes. Hybridization of RNA II with the template DNA is always required for initiation. Hybridized RNA II is cleaved by RNAase H to form a primer or used as a primer without cleavage by RNAase H. Hybridization also creates a single-stranded region on the nontranscribed strand that can serve as a template for synthesis of the lagging strand in a reaction that does not require DNA polymerase I. Lagging strand synthesis terminates 17 nucleotides upstream of the normal replication origin, forcing unidirectional replication.

Bacteriocin Plasmids↗
PubMed1987

Transcriptional activation of ColE1 DNA synthesis by displacement of the nontranscribed strand.

Plasmid ColE1 can replicate using RNAase H and DNA polymerase I. However, it can also replicate in the absence of these enzymes. In this case, formation of a persistent hybrid between a transcript (RNA II) and the DNA indirectly activates subsequent DNA synthesis, instead of providing a primer as it does in the presence of these enzymes. To activate DNA synthesis, a certain length is required for the hybridized region and the region of minimum length cannot include a palindrome. These results show that the single-stranded region of DNA displaced by the hybridization is responsible for the activation. A single-stranded region was identified on the nontranscribed strand by its enhanced reactivity to dimethyl sulfate. The necessary length for the single-stranded region is at least 40 nucleotides. The region probably provides a site for initial binding of a helicase that further unwinds the template DNA for initiation of DNA synthesis.

Bacterial Proteins↗
PubMed1987

Chloroplast as a Locale of L-myo-Inositol-1-Phosphate Synthase.

Chloroplasts from 5 to 7 day old Vigna radiata seedling, grown under alternate light/dark conditions or from green Euglena gracilis Z. cells have been found to harbor L-myo-inositol-1-phosphate synthase (EC 5.5.1.4) activity. In contrast, dark-grown V. radiata seedlings, or streptomycin-bleached Euglena cells exhibit either reduced or no enzyme activity. An apparent enhancement of the chloroplastic inositol synthase by growth in presence of light is observed.

Journal Article↗
PubMed1986

Cryogenic stabilization of myoglobin photoproducts.

The low frequency resonance Raman spectra of photodissociated carbon monoxymyoglobin at cryogenic temperatures (4-77 K) differ from those of deoxymyoglobin. Intensity differences occur in several low frequency porphyrin modes, and intensity and frequency differences occur in the iron-histidine stretching mode. This mode appears at about 225 cm-1 in deoxymyoglobin. At the lowest temperature studied, approximately 4 K, the frequency of the iron-histidine stretching mode in the photoproduct is approximately 233 cm-1, and the intensity is very low. When the temperature of the photoproduct is increased, the intensity of the mode increases, but its frequency is unchanged. The differences between the photoproduct and the deoxy preparation persist to 77 K, the highest temperature studied, and are independent of whether samples are frozen in phosphate buffer or a 50:50 ethylene glycol/phosphate buffer mixture. It is proposed that the frequency of the iron-histidine stretching mode is governed by the tilt angle of the histidine with respect to the normal to the heme plane, and the intensity of the mode is governed by the overlap between the sigma orbital of the iron-histidine bond and the pi orbital of the porphyrin macrocycle. This model can account for differences between the resonance Raman spectra of the photoproduct and the deoxy preparations of both hemoglobin and myoglobin. Furthermore, by considering the F-helix motions in going from 6-coordinate to 5-coordinate hemoglobin and myoglobin, the heme relaxation of these proteins at room temperature with 10-ns pulses can be explained. Based on the findings reported here, low temperature relaxation pathways for both hemoglobin and myoglobin are proposed.

Animals↗
PubMed1986

Resonance Raman characterization of the 7-ns photoproduct of (carbonmonoxy)hemoglobin: implications for hemoglobin dynamics.

Resonance Raman spectra are reported for deoxyhemoglobin (deoxyHb) and the (carbonmonoxy)hemoglobin (HbCO) photoproduct Hb by use of 7-ns YAG laser pulses at wavelengths of 416 and 532 nm, where enhancement is observed for totally symmetric and nontotally symmetric modes, respectively. The frequencies of the porphyrin skeletal modes v10, v2, v19, v11, and v3 have been determined to be 1602, 1559, 1553, 1542, and 1466 cm-1 in Hb. These frequencies are 2-3 cm-1 lower than the corresponding frequencies for deoxyHb. The v19 and v11 frequencies are at the expected values for a Ct-N distance of 2.057 A, the known core size for a 6-coordinate high-spin FeII-porphyrin complex. The remaining frequencies, however, deviate from the core size correlations for these modes in the same direction as do those of deoxyHb, suggesting that the porphyrin ring is domed in both species. Thus, the heme structure is similar for deoxyHb and Hb but is slightly expanded in the latter. The expanded heme in Hb implies a restraint on the full out-of-plane displacement of the Fe atom, by an estimated approximately 0.1 A relative to deoxyHb. This could result from a residual interaction with the CO molecule if the latter remains held by the protein against the Fe atom, in a high-spin 6-coordinate complex. The available spectroscopic evidence suggests that such a complex may be stabilized at 4 K but is unlikely to persist at room temperature beyond the electronic relaxation (0.35 ps) of the electronically excited heme.(ABSTRACT TRUNCATED AT 250 WORDS)

Carboxyhemoglobin↗
PubMed1986

Transient resonance Raman spectroscopy shows unrelaxed heme following CO photodissociation from cytochrome-c peroxidase.

The 7 ns 436 nm pulses of an H2-shifted YAG laser have been used to photolyze the CO adduct of cytochrome-c peroxidase and produce the resonance Raman spectrum of the photoproduct. A 3 cm-1 downshift, relative to the spectrum of reduced enzyme, was observed for the porphyrin C-N breathing mode, v4. The downshift diminishes with decreasing CO /protein ratio, implying, in conjunction with a recent study of CO binding, that the unrelaxed heme is associated with adduct having a tilted, H-bonded FeCO unit. The downshift is eliminated when the phosphate buffer concentration is increased from 0.01 to 0.1 M. It is proposed that the heme relaxation under study involves a transition between two conformations, B and A, differing in the disposition of the distal residues, and having different v4 frequencies for unligated Fe(II) heme. Conformation B allows H-bonding to bound CO, and is favored at high CO and phosphate concentrations, while conformation A, which is unfavorable to CO H-bonding, is favored at low CO and phosphate concentrations. The recently reported absence of unrelaxed frequencies in the 7 ns photo-product of the CO adduct of horseradish peroxidase has been confirmed, and is attributed to lower stability for conformation B and a smaller A - B v4 difference.

Carbon Monoxide↗
PubMed1986

Ultraviolet Raman spectroscopy indicates fast (less than 7 ns) R----T-like motion in hemoglobin.

Raman spectra of oxy- and deoxyhemoglobin obtained with 218 and 200 nm pulsed (7 ns) laser excitation show changes (loss of 880 cm-1 tryptophan band intensity, increase in the 830/850 cm-1 tyrosine doublet intensity ratio) which are attributed to the aromatic contacts (Trp beta 37-Tyr alpha 140 and Tyr alpha 42-Asp beta 99) that are specific to the T quaternary structure. At high concentration (2 mM in heme) HbCO shows the same spectral signatures as HbO2. As the HbCO concentration is decreased, however, the spectra approach those shown by deoxy-Hb. This dilution effect is attributable to photolysis, which increases with decreasing concentration. The results imply that the HbCO photoproduct shows the same aromatic environments as does deoxy-Hb. Thus, T-like contacts are apparently formed at the alpha 1 beta 2 interface within 7 ns of photolysis, a time short compared to the spectral alterations of the heme group (approximately 100 ns, approximately 1 microsecond, and approximately 20 microseconds) which have previously been attributed to tertiary and quaternary relaxations.

Hemoglobin A↗
PubMed1986

Resonance Raman spectroscopic evidence that carp deoxyhemoglobin remains in a T-like quaternary structure at high pH: implications for cooperativity.

Resonance Raman spectroscopy shows the Fe-proximal imidazole stretching band to shift from 215 to 219 cm-1 between human deoxyhemoglobin (deoxy-Hb) and a Hb sample which is 75% oxygenated, demonstrating that the T-R quaternary structure switch can be monitored by resonance Raman spectroscopy in native Hb at equilibrium. For deoxy-Hb from carp, the band is at 215 cm-1 at pH 9 as well as pH 6, contrary to previous reports of an elevated frequency at high pH. The invariance of this frequency over a large affinity difference is in contrast to a recent report of continuously varying vFe-ImH frequencies for human mutant deoxy-Hb's. The band shifts to 219 cm-1 for carp Hb at pH 9 when O2 is bound to only 20% of the hemes. The spectra are consistent with a T-R switch upon binding approximately 0.5 O2 per Hb, on the average, although the number may be higher if the binding affinity is higher for alpha- than for beta-chains. The 0.5 value, in conjunction with the weak cooperativity observed for carp Hb at pH 9, is incompatible with a value of the allosteric constant, L = (T0)/(R0), large enough to prevent the vFe-ImH band from shifting detectably at pH 9 in the absence of O2. The possibility of functionally important intermediate structures is discussed.

Animals↗
PubMed1986

Sialylation of lacto-N-neohexaosylceramide by sialyltransferase from embryonic chicken muscle.

A sialyltransferase which catalyzes the in vitro biosynthesis of N-acetylneuraminosyllacto-N-neohexaosylceramide from lacto-N-neohexaosylceramide and CMP-NeuAc has been examined in embryonic chicken breast muscle. The maximum enzyme activity was observed in 11-12-day-old embryos. The enzyme has optimum activity at pH 6.8 in the presence of Triton CF-54 and Mg2+. The apparent Km values for lacto-N-neohexaosylceramide and CMP-NeuAc were 0.9 and 0.67 mM, respectively. The enzymic product was characterized by TLC, neuraminidase hydrolysis and permethylation analysis. The structure was identical to authentic N-acetylneuraminosyllacto-N-neohexaosylceramide from chicken muscle. In addition, a disialo derivative has been detected that constitutes 15% of the total radioactivity incorporated. The two sialic acids connected by sialosyl-sialosyl linkage were attached to the terminal galactose residue. To our knowledge, this is the first report of biosynthesis of this disialo compound.

Animals↗
PubMed1986

Independence of centriole formation and initiation of DNA synthesis in Chinese hamster ovary cells.

The relationship between centriole formation and DNA synthesis was investigated by examining the effect of taxol on the centriole cycle and the initiation of DNA synthesis in synchronized cells. The centriole cycle was monitored by electron microscopy of whole-mount preparations [Kuriyama and Borisy, J. Cell Biol., 1981, 91:814-821]. A short daughter centriole appeared in perpendicular orientation to each parent during late G1 or early S and elongated slowly during S to G2. Addition of 5-20 micrograms/ml taxol to a synchronous population of cells in S phase did not inhibit centriole elongation; rather, elongation was accelerated. In contrast, when taxol was added to M phase or early G1 cells, centriole duplication was completely inhibited. The taxol block was reversible since nucleation and elongation of centrioles resumed as soon as the drug was removed. Cells exposed to taxol progressed through the cell cycle and became blocked in mitosis, as indicated by an increase in the mitotic index, but eventually the mitotic arrest was overcome, resulting in formation of multinucleated cells. A peak in mitotic index was seen in the following generation, indicating that chromosomes duplicated in the presence of taxol. Incorporation of 3H-thymidine followed by autoradiography confirmed that DNA synthesis was initiated in the presence of taxol even though formation of daughter centrioles was inhibited. It seems, therefore, that centriole duplication is not a prerequisite for entry into S phase. Since DNA synthesis has already been demonstrated not to be necessary for centriole duplication, these two events, normally coordinated in time, appear to be independent of each other.

Alkaloids↗
PubMed1986

Lipid content of swine influenza and other vaccines.

An analysis of the lipids in swine influenza vaccines was performed, comparing six different lots of swine influenza, other influenza and noninfluenza vaccines. Cholesterol content and phospholipid content varied greatly, but there were no major differences between the types of vaccines. Appreciable amounts of phosphatidylethanolamine were found in only one swine influenza vaccine. The major phospholipids of influenza vaccines were phosphatidylcholine, sphingomyelin and phosphatidic acid. A detectable amount of phosphatidylserine was not found in any swine influenza vaccine, but was present in two of three nonswine influenza vaccines. Only two of six swine influenza vaccines showed trace amounts (less than 0.5 microgram/ml) of ganglioside (GM3). However, larger quantities of galactocerebroside were found (2.24-6.43 micrograms/ml) in all influenza vaccines examined, including swine influenza vaccines.

Cholesterol↗
PubMed1986

A simple procedure for the preparation of pure kinetoplast DNA network free of nuclear DNA from the kinetoplast hemoflagellate Leishmania donovani.

A simple, inexpensive procedure for preparing pure kinetoplast DNA network from Leishmania donovani is described. L. donovani promastigotes were lysed by incubating with pronase in presence of sodium dodecylsulfate. Crude kinetoplast DNA networks were obtained by centrifugation of the lysate through a 20% sucrose solution. The pellet containing kinetoplast DNA was deproteinized by phenol extraction. Contaminating nuclear DNAs were removed by denaturation with alkali, neutralization, and addition of polyethylene glycol-8000 to a concentration of 10% to facilitate precipitation of kinetoplast DNA. kDNA isolated after centrifugation was deproteinized several times with phenol and finally precipitated with ethanol. The average yield by this procedure is 30-50 micrograms of kDNA per gram of wet cells. By slot-blot hybridization with a nuclear DNA probe, no nuclear DNA contamination of the kDNA networks could be detected.

Animals↗