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Biomedical subjects

S A Kozin

Publications and source records attributed to S A Kozin.

5 recordsLinked to original sources

Antigenic mapping of bacterial and animal cytochromes P-450.

A peptide scanning (PEPSCAN) approach was used for antigenic mapping of two hepatic microsomal cytochromes P450 (rab1A2 and rab2B4) and the microbial cytochrome from Pseudomonas putida (P450 101 or P450cam). This approach includes simultaneous synthesis of pin-linked overlapping hexapeptides covering the whole sequences of three P450s and testing them by ELISA with corresponding polyclonal antisera. Microsomal cytochrome P450 maps were shown to vary depending on an antiserum used for testing the peptides, however, the most active linear B-epitopes were revealed with antisera from two animal species used. P450 linear B-epitopes were classified into individual and group-specific epitopes. While almost all P450 101 linear antigenic determinants are unique for this protein, rab1A2 and rab2B4 contain epitopes both individual for each protein, and subfamily- or even family-specific epitopes. These results point out the possibility of producing both monospecific and group-specific antipeptide antibodies against different P450s. The antigenic map of P450 101 was superimposed on the structural-functional map of this protein. Its linear B-epitopes were shown to coincide with boundaries of secondary structure elements, with surface-located, water accessible regions and with sites responsible for intermolecular interactions in the Pseudomonas putida monooxygenase system. Several known or predicted functionally active sites in microsomal cytochrome P450 rab1A2 and rab2B4 were also shown to coincide with linear B-epitopes. The peculiarities of epitope locations in the protein tertiary structure will allow to predict antigenic regions starting from protein structural information and vice versa, to structural protein models in accordance with antigenic mapping results. Antigenic regions which coincide with sites responsible for intermolecular interactions in monooxygenase systems may be synthesized as separate peptides and used as blockers of such interactions.

Animals

[Surface of cytochrome P-450 2B4: structure and function].

The review is devoted to the identification and structure of one of the cytochromes P450s-cytochrome P-450 2B4 derived from the rabbit liver endoplasmic reticulum. A critical review is made of the data on this enzyme membrane topology, its active site's structure and localization of its membrane and water-exposed regions. The paper is based on the data available in the literature and the authors' own findings. Various experimental and calculating methods used to identify the topography of cytochrome P450 are covered in the paper.

Amino Acid Sequence

Epitope mapping of cytochrome P450 2B4 by peptide scanning.

Overlapping hexapeptides covering the whole sequence of the cytochrome P450 2B4 have been synthesized on the solid supports and tested by ELISA using the polyclonal antiserum against cytochrome 2B4. 70 hexapeptide fragments have been found to interact specifically with the antiserum, i.e. to possess antigenic activity. The mapped linear epitopes occupy about 43% of the whole sequence of 2B4. They presumably form clusters in the regions of No. 60-150, 210-300, 390-430 and 465-486 amino acid residues. The use of cytochrome P450 DataBase has allowed to classify the revealed antigenic determinants into absolutely specific for 2B4, specific only for 2B4 and 2B5, characteristic for 2B subfamily and widely distributed in family 2.

Amino Acid Sequence

[Detection of antigenic determinants of alcohol dehydrogenase for certain biological species using antipeptide antibodies].

The structural and functional peculiarites of alcohol dehydrogenases (ADH) of some biological species have been studied using antipeptide antibodies (AB). The synthetic peptides were used which corresponded to the functionally important sites (1-14, 93-115, 265-276) of equine liver ADH. Conjugates of peptides with protein carriers were obtained and used for immunization of laboratory animals. It was shown that the antipeptide antibodies formed therefrom could interact with the corresponding synthetic peptides, with conjugates derived from them as well as with the native enzyme. The results of cross-reactivity of antipeptide AB with ADH from other biological sources suggest that amino acid sequences (1-14), (93-115) and (265-276) contain common antigenic determinants for the corresponding ADH from animal sources. According to computer prediction data for linear epitopes of equine liver ADH, sequence (93-115) comprises amino acid residues of the antigenic determinants with enhanced conformational rigidity which is consistent with the literary data on the functional significance of this site (the loop ligating the second Zn atom). Sequences (1-14) and (265-276) contain amino acid residues capable of interacting with AB and pertaining, in all probability, to antigenic determinants formed by mobile structures.

Alcohol Dehydrogenase