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R M Nalbandyan

Publications and source records attributed to R M Nalbandyan.

At least 19 recordsLinked to original sources

A missing link in cupredoxins: crystal structure of cucumber stellacyanin at 1.6 A resolution.

Stellacyanins are blue (type I) copper glycoproteins that differ from other members of the cupredoxin family in their spectroscopic and electron transfer properties. Until now, stellacyanins have eluded structure determination. Here we report the three-dimensional crystal structure of the 109 amino acid, non-glycosylated copper binding domain of recombinant cucumber stellacyanin refined to 1.6 A resolution. The crystallographic R-value for all 18,488 reflections (sigma > 0) between 50-1.6 A is 0.195. The overall fold is organized in two beta-sheets, both with four beta-stands. Two alpha-helices are found in loop regions between beta-strands. The beta-sheets form a beta-sandwich similar to those found in other cupredoxins, but some features differ from proteins such as plastocyanin and azurin in that the beta-barrel is more flattened, there is an extra N-terminal alpha-helix, and the copper binding site is much more solvent accessible. The presence of a disulfide bond at the copper binding end of the protein confirms that cucumber stellacyanin has a phytocyanin-like fold. The ligands to copper are two histidines, one cysteine, and one glutamine, the latter replacing the methionine typically found in mononuclear blue copper proteins. The Cu-Gln bond is one of the shortest axial ligand bond distances observed to date in structurally characterized type I copper proteins. The characteristic spectroscopic properties and electron transfer reactivity of stellacyanin, which differ significantly from those of other well-characterized cupredoxins, can be explained by its more exposed copper site, its distinctive amino acid ligand composition, and its nearly tetrahedral ligand geometry. Surface features on the cucumber stellacyanin molecule that could be involved in interactions with putative redox partners are discussed.

Amino Acid Sequence↗

Cloning, expression, and spectroscopic characterization of Cucumis sativus stellacyanin in its nonglycosylated form.

The cDNA encoding the 182 amino acid long precursor stellacyanin from Cucumis sativus was isolated and characterized. The protein precursor consists of four sequence domains: I, a 23 amino acid hydrophobic N-terminal signal peptide with features characteristic of secretory proteins; II, a 109 amino acid copper-binding domain; III, a 26 amino acid hydroxyproline- and serine-rich peptide characteristic of motifs found in the extension family, extracellular structural glycoproteins found in plant cell walls; and IV, a 22 amino acid hydrophobic extension. Maturation of the protein involves posttranslational processing of domains I and IV. The copper-binding domain (domain II), which shares high sequence identity with other stellacyanins, has been expressed without its carbohydrate attachment sites, refolded from the Escherichia coli inclusion bodies, purified, and characterized by electronic absorption, EPR, ESEEM, and RR spectroscopy. Its spectroscopic properties are nearly identical to those of stellacyanin from the Japanese lacquer tree Rhus vernicifera, the most extensively studied and best characterized stellacyanin, indicating that this domain folds correctly, even in the absence of its carbohydrate moiety. The presence of a hydroxyproline- and serine-rich domain III suggests that stellacyanin may have a function other than that of a diffusible electron transfer protein, conceivably participating in redox reactions localized at the plant cell wall, which are known to occur in response to wounding or infection of the plant.

Amino Acid Sequence↗

The amino acid sequence of the spinach basic cupredoxin plantacyanin.

We describe the amino acid sequence of plantacyanin isolated from spinach leaves. This small basic copper-binding plant cupredoxin contains 91 amino acids (accession no. S70746) and its theoretical average mass of 9788.2 Da was confirmed by electrospray ionization mass spectrometry. When compared to the sequences of other plant cupredoxins, the most similar homologs were cucumber basic blue protein and stellacyanin from Laquer tree with 44-58% identical residues. Other known plant cupredoxins were significantly less similar which may allow to divide the plant cupredoxins into two subgroups, the single-domain cupredoxins (plantacyanin, cucumber basic blue protein and stellacyanin) and the two-domain, hydroxyproline-containing cupredoxins (cucumber peeling cupredoxin, basic blue protein from Arabidopsis thaliana and horseradish umecyanin).

Amino Acid Sequence↗

Immunological characterization of peptidyl-glycine-alpha-amidating monooxygenases.

Antibodies to the soluble form of the copper-containing enzyme, peptidyl-glycine-alpha-amidating monooxygenase isolated from secretory granules of bovine pituitary anterior lobes were found to belong to immunoglobulin G1. The antibodies were used to study the subcellular distribution of the enzyme in this tissue, and positive tests were found only for granular and cytosol fractions. The antibodies do not crossreact with other copper-containing systems of secretory granules, such as neurocuprein and dopamine-beta-monooxygenase. It was shown that the antibodies give the crossreaction with the enzyme isolated from secretory granules of bovine pituitary anterior lobes, cardiac atria, pancreas and adrenal medulla, indicating the antigenic identity of the enzyme from secretory granules of different glands.

Adrenal Medulla↗

Studies on plantacyanin. IV. Reconstitution with Cu-thionein, oxidation by cytochrome oxidase and autooxidation in the presence of cardiolipin.

Cu-thionein isolated from cucumber roots was used for reconstitution of plantacyanin from cucumber. The rate of the copper transfer from Cu-thionein to apoplantacyanin was found to depend on pH, ionic strength and concentrations of the proteins. The rate of reconstitution with Cu-thionein was 10-times higher than with copper ions. No intermediate was observed during reconstitution with Cu-thionein. The incubation of oxidized holoplantacyanin with Cu-thionein or apothionein brings about the reduction of plantacyanin copper. This process, however, was found to be slow as compared to the rate of copper transfer from Cu-thionein to apoplantacyanin. Cytochrome oxidase from heart mitochondria was detected to possess some plantacyanin oxidase activity with the turnover number 5 min-1. The activity of the enzyme towards plantacyanin as well as with cytochrome c as a substrate was established to be lipid and ionic strength-dependent, and it was inhibited by CN- and N3-. Lineweaver-Burk plots show that the inhibitory effect of ionic strength on plantacyanin oxidase activity is connected with changes of Michaelis constant rather than of the maximal rate. Plantacyanin which is known to be very resistant towards many cationic, anionic and nonionic detergents, becomes, as well as cytochrome c, autooxidable in the presence of cardiolipin.

Animals↗

Particles of photosystem 2 contain plantacyanin.

PS2 particles prepared from chloroplasts of three plant species were shown to contain the basic blue copper protein, plantacyanin, which may be extracted from the particles by concentrated saline solutions containing Triton X-100. Antibodies to plantacyanin were found to inhibit the photosynthetic oxygen evolution performed by the particles. Thus, evidences were obtained for participation of this protein in the oxygen-evolving activity of PS2 particles.

Chlorophyll↗

Reconstitution of neurocupreins by Cu-thioneins.

Cu-thioneins isolated from liver and brains are able to transfer their copper atoms to apoforms of neurocuprein 1 and 2. At the same time, the apoform of Cu-thionein is unable to accept copper from holoforms of both neurocupreins.

Animals↗

The reactivation of apodopamine beta-monooxygenase by vanadyl ions.

Vanadyl ions may be used for reactivation of apodopamine beta-monooxygenase. Maximal activity of the enzyme was achieved at a 350-400-fold molar excess of vanadyl ions, whereas for maximal reconstitution with copper, an 8-10-fold molar excess of copper was necessary. AT higher concentrations of vanadyl as well as of copper, inhibition was observed.

Adrenal Medulla↗

Secretory granules from different glands contain neurocuprein-like protein.

Secretory granules obtained from bovine pituitary, atrium and adrenal medulla contain an extremely acidic copper protein resembling by its main physico-chemical and antigenic properties as well as by the ability of its apoform to inhibit dopamine beta-monooxygenase the protein from brain, neurocuprein.

Adrenal Medulla↗

On the copper transfer between dopamine beta-monooxygenase and Cu-thionein.

Metallothionein saturated with copper is able to donate copper to apodopamine beta-monooxygenase. The complete recovery of dopamine beta-monooxygenase activity is observed at the molar ratio Cu-thionein/apoenzyme of 25. On the other hand, apothionein accepts copper easily from the holoenzyme.

Adrenal Medulla↗

Similarities of physico-chimical and antigenic properties of neurocupreins and extremely acidic copper proteins from chromaffin granules.

Extremely acidic copper-containing proteins, neurocupreins, were isolated from brains of various mammals (bovine, rabbit, pig and sheep). Neurocupreins from all these sources were found to have similar physico-chemical and antigenic properties. Using the immunological approach, it was shown that neurocuprein is located only in brain cytosol and synaptosomal fractions. Extremely acidic copper-containing proteins were also isolated from soluble and membranous fractions of chromaffin granules from bovine adrenal medulla. The soluble form of the protein from the granules has practically the same physico-chemical and antigenic properties as neurocupreins. The copper protein isolated from membranes of granules has slightly higher molecular weight and somewhat different amino acid composition, although their EPR spectra are identical. However, both copper proteins from chromaffin granules are immunoprecipitated with antibodies to neurocuprein. It is suggested that the membranous form differs from the soluble one in possessing a peptide which prolongs the protein chain without changes in its antigenic properties.

Animals↗

A copper-containing protein that inhibits nitrite reductase from Pseudomonas aeruginosa.

A non-blue copper-containing glycoprotein was isolated from Pseudomonas aeruginosa. The protein has a molecular mass of 10 kDa and contains 1 atom of EPR-detectable type II copper. The protein inhibits oxidation of both azurin and cytochrome c-551 catalyzed by nitrite reductase from Ps. aeruginosa. Thus, it may be considered as an endogenous inhibitor of nitrite reductase.

Copper↗

On the physiological role of neurocuprein: aponeurocuprein is an inhibitor of dopamine beta-monooxygenase.

The apoform of neurocuprein, the copper protein from brain and chromaffin granules, was found to be a potent inhibitor of the hydroxylating activity of dopamine beta-monooxygenase, whereas the holoform of neurocuprein has no effect on the activity of the enzyme. The inhibiting capacity of neurocuprein may be due to the property of the apoprotein to chelate copper from the enzyme. A role of neurocuprein as an endogenous protein regulator of dopamine beta-monooxygenase is suggested.

Animals↗

The effect of nitrite on cytochrome oxidase.

Nitrite inhibits the oxygen uptake by the system ferrocytochrome c-cytochrome oxidase with Ki = 1.5 mM. In the absence of ferrocytochrome c the oxygen uptake by cytochrome oxidase in the presence of nitrite was observed indicating that the enzyme has some nitrite oxidase activity. Nitrite induces changes in optical difference spectra of cytochrome oxidase and, in particular, the formation of the transient band at 607 nm. The reciprocal relation was observed between the intensity of this band and the rate of the oxygen uptake by cytochrome oxidase. This means that the form of the enzyme with this band does not involved in the nitrite oxidase activity. It is suggested that the nitrite oxidase activity relates to the oxygen binding site rather than the cytochrome c binding site of the enzyme.

Animals↗

The IH-NMR-study of the copper surrounding in plantacyanin.

The 300-MHz proton NMR spectra of oxidized, reduced and apo-forms of plantacyanin were studied. The data obtained show that one of two histidines is far from copper whereas the other is a ligand of the metal. Ligands of copper are also two methionines and, possibly, tryptophan. Although the surrounding of copper in plastocyanin consists of two sulfur and two nitrogen atoms, only histidine and methionine are invariant ligand amino acids of the metal in these two copper proteins from plants.

Copper↗

Benzylamine oxidase from brain microvessels.

Copper-containing benzylamine oxidase with a specific activity of 200 units was isolated from bovine brain microvessels. It was shown that the content of the enzyme in microvessels was significantly higher as compared with large blood vessels such as heart aorta. Some physico-chemical properties of the enzyme were determined. The enzyme was inhibited by high concentrations of the substrate as well as thiol reagents and beta-aminopropionitrile fumarate. On the basis of EPR and optical spectra of the enzyme its copper was considered to be 'non-blue' type.

Animals↗

Changes induced by hydrazine in optical spectra of cytochrome oxidase.

Under aerobic conditions hydrazine reduces haem a of cardiac cytochrome oxidase and brings about the formation in optical spectra of a new band at 845 nm, whereas under anaerobic conditions hydrazine reduces both haems, a and a3, as well as EPR-detectable copper, CuA, and results in the band at 845 nm. The formation of this band was sensitive to inhibitors of oxygen binding. It is suggested that the band at 845 nm reflects changes induced by hydrazine in CuB which in the resting enzyme is EPR-undetectable.

Animals↗

Copper in brain.

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Animals↗