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Biomedical subjects

R Leahy

Publications and source records attributed to R Leahy.

8 recordsLinked to original sources
PubMed2001

Cryopreservation of epididymal dog sperm.

A method of cryopreservation was developed for sperm salvaged from the cauda epididymis and vas deferens of domestic dog testes. Four modifications of the glycerol concentration of a buffer used for cryopreservation of dog ejaculates and two freezing rates were assessed for their effect upon post-thaw spermatozoal motility and morphology. There was no statistical difference between the four glycerol concentrations or the two freezing rates and the buffer containing 6% glycerol and the freezing rate provided by 0.5 ml straws was chosen for further study. This method resulted in a significant reduction in the percentage of live spermatozoa detected with Hoechst staining and a reduction in the percentage of capacitated spermatozoa after freeze-thawing. However, there was no difference in the ability of frozen-thawed spermatozoa to penetrate homologous oocytes. This study demonstrates that cryopreservation of epididymal canine sperm can be performed using methods similar to those established for ejaculates of the same species, and that despite some damage, spermatozoa retain their functional ability.

Animals↗
PubMed2000

Comparison of 3-D maximum a posteriori and filtered backprojection algorithms for high-resolution animal imaging with microPET.

We have evaluated the performance of two three-dimensional (3-D) reconstruction algorithms with data acquired from microPET, a high resolution tomograph dedicated to small animal imaging. The first was a linear filtered-backprojection algorithm (FBP) with reprojection of the missing data, and the second was a statistical maximum a posteriori probability algorithm (MAP). The two algorithms were evaluated in terms of their resolution performance, both in phantoms and in vivo. Sixty independent realizations of a phantom simulating the brain of a baby monkey were acquired, each containing three million counts. Each of these realizations was reconstructed independently with both algorithms. The ensemble of the 60 reconstructed realizations was used to estimate the standard deviation as a measure of the noise for each reconstruction algorithm. More detail was recovered in the MAP reconstruction without an increase in noise relative to FBP. Studies in a simple cylindrical compartment phantom demonstrated improved recovery of known activity ratios with MAP. Finally, in vivo studies also demonstrated a clear improvement in spatial resolution using the MAP algorithm. The quantitative accuracy of the MAP reconstruction was also evaluated by comparison with autoradiography and direct well counting of tissue samples and was shown to be superior.

Algorithms↗
PubMed1997

Surface-based labeling of cortical anatomy using a deformable atlas.

We describe a computerized method to automatically find and label the cortical surface in three-dimensional (3-D) magnetic resonance (MR) brain images. The approach we take is to model a prelabeled brain atlas as a physical object and give it elastic properties, allowing it to warp itself onto regions in a preprocessed image. Preprocessing consists of boundary-finding and a morphological procedure which automatically extracts the brain and sulci from an MR image and provides a smoothed representation of the brain surface to which the deformable model can rapidly converge. Our deformable models are energy-minimizing elastic surfaces that can accurately locate image features. The models are parameterized with 3-D bicubic B-spline surfaces. We design the energy function such that cortical fissure (sulci) points on the model are attracted to fissure points on the image and the remaining model points are attracted to the brain surface. A conjugate gradient method minimizes the energy function, allowing the model to automatically converge to the smoothed brain surface. Finally, labels are propagated from the deformed atlas onto the high-resolution brain surface.

Algorithms↗
PubMed1990

Three-dimensional maximum-likelihood reconstruction for an electronically collimated single-photon-emission imaging system.

A three-dimensional maximum-likelihood reconstruction method is presented for a prototype electronically collimated single-photon-emission system. The electronically collimated system uses a gamma camera fronted by an array of germanium detectors to detect gamma-ray emissions from a distributed radioisotope source. In this paper we demonstrate that optimal iterative three-dimensional reconstruction approaches can be feasibly applied to emission imaging systems that have highly complex spatial sampling patterns and that generate extremely large numbers of data values. A probabilistic factorization of the system matrix that reduces the computation by several orders of magnitude is derived. We demonstrate a dramatic increase in the convergence speed of the expectation maximization algorithm by sequentially iterating over particular subsets of the data. This result is also applicable to other emission imaging systems.

Image Processing, Computer-Assisted↗
PubMed1987

Spoilage of hydrogel contact lenses by lipid deposits. Tear-film potassium depression, fat, protein, and alcohol consumption.

"Jelly-bump" deposits, which are composed mainly of lipids, on high water content, extended-wear hydrogel lenses, are a clinically significant problem of unknown etiology. The authors explored the effect of nutrition on the frequency of deposition of these jelly bumps. Forty-three patients were included in this masked case-control study from five contact lens practices in North America. Thirty patients were lipid-depositor cases and 13 were controls. Tear specimens were drawn and analyzed for potassium by atomic-absorption spectrophotometry. Detailed dietary histories were conducted and diet nutrient composition was computed. Patients with diminished tear-potassium concentrations have an increased risk of jelly-bump deposition. Elevated intake of protein, alcohol, and cholesterol also appeared to be correlated significantly with increased jelly-bump deposition. The authors found that diabetics and the use of diuretics, anticholinergics, sympathomimetics, were associated with tear-film potassium depletion and lipid deposit formation.

Adolescent↗