Development of persistent lymphocytosis in cattle is closely associated with DRB2.
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Alleles↗
Biomedical subjects
R L Fernando
Publications and source records attributed to R L Fernando.
An embryo transfer study of reciprocal cross differences in growth and carcass traits of Duroc and Landrace pigs.
Reciprocal cross differences have been reported for growth rate and carcass traits in F1 pigs with the Duroc (D) as a parent breed. Such differences are synonymous with maternal effects if effects of sex linkage and genomic imprinting are negligible. In the present study, transfer of embryos (ET) to paternal breed recipients partitioned effects occurring at or before fertilization from postfertilization effects for growth and carcass traits in F1 D-Landrace (L) pigs. Fifteen boars sired 115 F1 litters, 49 produced by ET. Growth rate of 349 barrows and 361 gilts and carcass measurements on 256 barrows and 159 gilts were analyzed assuming mixed linear models with animal and litter as random effects. Contrasts among genotype (D x L, L x D)- treatment (ET, non-ET) means were tested. Reciprocal cross differences were not detected for growth rate or for carcass weight, length, average backfat thickness, estimated carcass lean, or lean per day of age. Reciprocal cross differences for 10th rib backfat thickness (BF) and longissimus muscle area (LMA) were detected only in barrows. The sexual dichotomy for reciprocal cross differences followed expectations for a Y-linked gene(s), consistent with the fact that reciprocal D-L crossbred barrows exhibited a paternal effect, with responses more like the sire breed than the dam breed. Barrows that were non-ET from D sires and L dams had 3.9 cm2 larger LMA and 5.8 mm less BF than barrows from L sires and D dams (P less than .001). Barrows from ET sired by D boars had 3.8 cm2 larger LMA than did barrows from ET sired by L boars (P less than .001), although no difference was detected for BF. Barrows sired by D boars reared in a D postfertilization environment (ET) had 6.2 cm2 greater LMA and 4.1 mm less BF (P less than .05) than barrows sired by L boars gestated and reared by D dams (non-ET). Barrows sired by D boars reared by L dams (non-ET) had 1.5 cm2 greater LMA and 2.3 mm less BF (P greater than .10) than barrows sired by L boars reared by L dams (ET). In conclusion, reciprocal cross differences detected for BF and LMA in barrows were established before or at fertilization and seemed to be Y-linked.
Adipose Tissue↗
Genetic analyses of growth, real-time ultrasound, carcass, and pork quality traits in Duroc and Landrace pigs: I. Breed effects.
Knowledge of breed effects on carcass and pork quality traits is required to develop commercial crossbreeding programs that emphasize product quality. A 2 x 2 diallel mating system involving Landrace and Duroc pigs was used to estimate individual heterosis, direct breed effects and reciprocal cross differences for post-weaning growth, real-time ultrasound, carcass, and pork quality traits. Data from 5,649 pigs and 960 carcasses representing 65 and 49 sires, respectively, were analyzed assuming animal models. Duroc-sired pigs had 2.1 cm shorter carcasses with 7.3 mm less 10th rib backfat (BF), 4.4 cm2 larger longissimus muscle area (LMA), yielded 2.1 kg more estimated fat standardized lean (FSL), gained 16.5 g more estimated lean per day of age (LDOA), and had 1.0% less water (PWAT) and 1.9% more intramuscular fat (IMF) in the longissimus muscle than did Landrace-sired pigs (P less than .01), adjusted to an off-farm live weight of 111 kg. Reciprocal cross differences were detected for BF, LMA, FSL, LDOA and for subjective marbling, firmness, and muscling scores (P less than .01). Durocsired F1 barrows had 6.3 mm less BF and 5.9 cm2 larger LMA, yielded 3.2 kg more FSL, gained 22.3 g more LDOA, and had less marbling in the longissimus muscle and heavier ham muscling than reciprocal cross barrows. Heterosis estimates (P less than .05) were 27.6 g/d (3.2%) for ADG, -5.8 d (-3.6%) for off-test age, 2.7 cm (3.4%) for carcass length, 1.5 kg (7.2%) for FSL, 14.7 g (5.7%) for LDOA, -.07 (-3.6%) for muscle color, -.5% (-13.2%) for IMF, and .3% (.3%) for PWAT. Breed effects were not detected (P greater than .10) for muscle pH, cooking loss, shear value, and water-holding capacity or for eating quality traits. Reciprocal cross differences suggest an advantage in using the Duroc as a terminal sire, but improved carcass composition and higher intramuscular fat did not seem to affect eating quality traits.
Adipose Tissue↗
Genetic analyses of growth, real-time ultrasound, carcass, and pork quality traits in Duroc and Landrace pigs: II. Heritabilities and correlations.
Knowledge of the genetic control of pork quality traits and relationships among pork quality, growth, and carcass characteristics is required for American swine populations. Data from a 2 x 2 diallel mating system involving Landrace and Duroc pigs were used to estimate heritabilities and genetic correlations among growth (ADG), real-time ultrasonic (US) measures of backfat thickness (BF) and longissimus muscle area (LMA), carcass characteristics, and various pork quality traits. Data were collected from 5,649 pigs, 960 carcasses, and 792 loin chops representing 65, 49, and 49 sires, respectively. Genetic parameters were estimated by REML assuming animal models. Heritability estimates were moderate to high for ADG, USBF, USLMA, carcass BF, and LMA, percentage of LM lipid (IMF), pork tenderness, and overall acceptability. Estimates were low to moderate for percentage of cooking loss, pH, shear force, percentage of LM water, water-holding capacity (WHC), pork flavor, and juiciness. Genetic correlations between US and carcass measures of BF and LMA indicate that selection based on US data will result in effective improvement in carcass characteristics. Selection for increased LMA and(or) decreased BF using US is, however, expected to result in decreased IMF and WHC, increased percentage of LM water and shear value, and in decreased juiciness, tenderness, and pork flavor. Average daily gain was favorably correlated with IMF and unfavorably correlated with shear force. Selection for increased ADG is expected to improve WHC but to decrease the percentage of LM water, with an associated decrease in juiciness. The results of this study suggest the feasibility of including meat quality in selection objectives to improve product quality. Favorable genetic correlations between IMF and eating quality traits suggest the possible merit of including IMF in the selection objective to improve, or restrict change in, pork eating quality.
Adipose Tissue↗
Detection of linkage between genetic markers and genes that affect growth and carcass traits in pigs.
Segregation of paternal marker alleles in the progeny of a single boar was used to estimate linkage between the marker genes and associations of these genes with quantitative trait loci (QTL). The sire was heterozygous at four polymorphic marker loci, haptoglobin (HP), glucosephosphate isomerase (GPI), phosphogluconate dehydrogenase (PGD), and esterase D (ESD), and sired 30 litters during an 8-mo period. Glucosephosphate isomerase and PGD were linked (theta = .09; P less than .005). The phase of these two loci in the sire was determined to be GPI A-PGD B, GPI B - PGD A. NO other linkages were detected. Growth (135 less than or equal to n less than or equal to 172) and carcass data (70 less than or equal to n less than or equal to 80) were analyzed assuming a fixed linear model. Least squares means were compared for differences in growth and carcass traits between pigs that inherited alternative paternal marker alleles. Pigs that inherited the GPI A allele from the sire had a 22-g higher daily live weight gain postweaning and reached 103 kg live weight in 2.6 fewer days than did pigs that inherited the GPI B allele (P less than .05), indicative of the presence of gene(s) that affect rate of gain linked to the GPI locus. Pigs that inherited the PGD B allele had a .14 unit higher score for muscle firmness (score ranged from 1 to 3 units) than pigs that inherited the PGD A allele (P less than .05). Pigs that inherited the HP 3 allele had a .06-kg higher weaning weight and a .11 lower ham muscle mass score than did pigs that inherited the HP 2 allele from the sire (P less than .05). No associations with quantitative traits were detected for ESD.
Alleles↗
Estimation of heterogeneous variances using empirical Bayes methods: theoretical considerations.
Procedures are described to estimate variances when heterogeneity of genetic and residual dispersion parameters exists for some criterion. Genetic and residual variances are considered to follow distributions with either known or unknown parameters. The estimates of variances obtained are weighted averages of the corresponding parameter and of a data-based statistic. Although the techniques presented are largely inspired by Bayesian ideas, the procedures can be given a frequentist interpretation, and the parameters of the prior distributions can be estimated from the data at hand. Techniques are described and illustrated for situations in which animals are related or unrelated across herds. We conjecture that the proposed estimators have smaller mean squared error than those obtained by grouping observations in some way and then applying REML within each group.
Animals↗
Characterisation of the binding of low-density lipoproteins to cultured rat mesangial cells.
Mesangial cell lipid accumulation is a recognised feature of glomerular disease and has been implicated as a factor in the pathogenesis of renal injury. To investigate possible mechanisms of such accumulation, binding of 125I-labelled human low-density lipoprotein (LDL) to rat mesangial cells was studied in vitro. Experiments were performed at 4 degrees C to prevent ligand internalisation. LDL remained associated with the cells after repeated washing. Binding was time-dependent, was inhibited by addition of an excess of unlabelled LDL, but to a much lesser extent by apoprotein-A-rich high-density lipoprotein particles devoid of apoprotein E (HDL-A). Specific binding reached saturation at an LDL concentration of 21 micrograms/ml, required the presence of calcium, and was inhibited by heparin and dextran sulphate. Scatchard analysis suggested a single class of binding site (Kd 22.7 micrograms protein/ml). Higher binding affinities were obtained when rat LDL was substituted for human LDL (Kd 1.3 micrograms/ml) and when human fibroblasts were exposed to human LDL under identical experimental conditions (Kd 3.0 micrograms/ml). Further experiments at 37 degrees C demonstrated degradation of LDL by cells. These results suggest that mesangial cells possess apoprotein B, E receptors. Mesangial cell lipid accumulation may therefore result from receptor-mediated endocytosis of LDL particles.
Animals↗
Effects of increasing crude protein level on nitrogen retention and intestinal supply of amino acids in lambs fed diets based on alkaline hydrogen peroxide-treated wheat straw.
The effects of increasing dietary CP level on N retention (Exp. 1) and intestinal supply of amino acids (AA; Exp. 2) were studied in lambs fed diets based on alkaline hydrogen peroxide-treated wheat straw (AHPWS). Soybean meal (SBM) was substituted for corn to increase CP level in both experiments. In Exp. 1, an incomplete design for the two-way elimination of error was used to allot 24 ram lambs (mean BW = 25 kg) within breed to six CP levels (6, 8, 10, 12, 14, and 16% of DM). Neutral detergent fiber digestibility and N retention increased quadratically (P = .06 and P less than .01, respectively) with increasing CP level. Nitrogen retention, expressed as a percentage of N intake, was greatest for lambs fed 12% CP (20.7%) but was greatest for lambs fed 14% CP when expressed as grams per day (4.0 g/d). In Exp. 2, five multicannulated St. Croix lambs (34 kg) were used in a 5 x 5 Latin square design. Treatments were 8.5, 11, 13.5, 16, and 18.5% dietary CP. Chromic oxide was used as a digesta flow marker and purines were used as a bacterial marker. Protein level had no effect on extent of dietary CP degradation in the rumen (69 +/- 3.2%). True ruminal OM digestibility increased (P less than .01) linearly and ruminal fluid NH3 N concentration increased (P less than .01) quadratically with increasing CP level. Total, bacterial, and nonbacterial N and AA flows to the duodenum increased (P less than .05) linearly with increasing CP level. Duodenal AA profile (g/100 g total AA) was altered slightly. The essential AA valine, isoleucine, phenylalanine, lysine, and arginine increased (P less than .05) and methionine decreased (P less than .05) in proportion to other AA with increasing CP level. Flows of all essential AA increased with increasing CP level. Apparent small intestinal N and AA disappearance increased linearly (P less than .05) and apparent total tract N digestibility increased (P less than .01) quadratically with increasing CP level. These data are interpreted to indicate that maximal N retention and fiber digestibility in diets based on AHPWS are obtained at 12% CP, even though the intestinal supply of AA continues to increase with increasing CP level. Supplementation of diets based on AHPWS with an extensively degraded protein source (SBM) does not substantially alter the profile of AA entering the duodenum compared to the AA profile of bacterial protein.
Amino Acids↗
Digestion criteria in nursing beef calves supplemented with limited levels of protein and energy.
This study was conducted with grazing nursing calves (197 kg) to determine the effects of 1) limiting creep feed intake and 2) increasing the concentration of ruminal escape CP in creep feed at a limited level of creep feed intake on fescue and milk intake, ruminal NDF digestion, and total tract digestibility in calves fed high-quality, freshly harvested fescue. The treatments were 1) control (no creep feed), 2) limited intake of creep feed (.60 kg/d) having a moderate concentration of CP (13%), 3) limited intake of creep feed (.60 kg/d) having a high concentration of CP (35%), and 4) unlimited (high) intake (1.62 kg/d) of the same creep feed fed in Treatment 2. Forage OM intake was negatively correlated (r = -.995, P less than .05) with level of creep feed OM intake, whereas milk OM intake was not affected by level of creep feed intake. Decreases in ruminal fiber digestion and total tract NDF digestion caused by unlimited creep feeding were partially avoided by limiting creep feed intake. Digestible OM intake increased by .47 kg per kilogram of creep feed OM intake.
Ammonia↗
Associations between genetic markers and growth and carcass traits in a paternal half-sib family of Angus cattle.
Segregation of polymorphic marker genes in a paternal half-sib family of Angus cattle was used to detect associations between genetic markers and quantitative traits. The half-sib family selected (n = 146) had a sire that was heterozygous at six polymorphic marker loci; BoLA-A (class I major histocompatibility complex), B, C and F blood group systems, serum transferrin and vitamin D binding protein. Segregation of alleles fit the expected ratios for all marker loci. Performance data analyzed for all half-sibs included birth, 205-d and 365-d adjusted weights and pre- and post-weaning average daily gains. Carcass data for steers (n = 61) included carcass weight, rib-eye area, 12th rib fat thickness, percent kidney, heart and pelvic fat and yield grade. Least squares means were compared for differences in performance and carcass traits between groups of half-sibs that inherited alternative paternal alleles. Significant effects were found for two of the six marker systems. Half-sibs that inherited the chromosomal segment (CS) marked by the RBC-B system BGKOxY2A'O' phenogroup had heavier 205-d (9.1 kg) and 365-d (17.3 kg) adjusted weights, faster preweaning average daily gains (.04 kg) and less fat thickness (-2.6 mm) than sibs that inherited the CS marked by I2Y2E'1Y'. Also, sibs that inherited the CS marked by the BoLA-w2 allele had larger rib-eye areas (4.1 cm2) than sibs that inherited BoLA-w28. These data indicate the probable presence of genes linked to the RBC-B and BoLA systems that affect preweaning growth and lean muscle content.
Alleles↗
Likelihood estimation of quantitative genetic parameters when selection occurs: models and problems.
Conceptual aspects of estimation of genetic components of variance and covariance under selection are discussed, with special attention to likelihood methods. Certain selection processes are described and alternative likelihoods that can be used for analysis are specified. There is a mathematical relationship between the likelihoods that permits comparing the relative amount of information contained in them. Theoretical arguments and evidence indicate that point inferences made from likelihood functions are not affected by some forms of selection.
Animals↗
Reversal of depressed miduterine arterial flow during hyperthermia-induced respiratory alkalosis.
The influence of ambient and arterial PCO2 on miduterine arterial flow of pregnant sheep acutely exposed to hot environments was investigated. Five mixed-breed ewes between 120 and 130 days of gestation were subjected to hot environments (increasing from thermoneutral 23 to 40 degrees C), and arterial blood pH, PCO2, and PO2 were determined at 5-min intervals. Respiratory rate, heart rate, rectal temperature, blood pressure, and miduterine arterial flow were continuously monitored prior to and during elevation of ambient air temperature. When miduterine arterial flow had decreased to 50% of thermoneutral control levels, ambient air CO2 was increased to 2.5%. Elevated ambient inspired CO2 caused a reversal in arterial pH and PCO2 to near thermoneutral levels. Miduterine arterial flow increased to 77% of the control levels following the elevated ambient PCO2 period. Respiratory rate also decreased when ambient CO2 was increased but remained 136% greater than the thermoneutral control level. All other parameters remained near their heat stress (40 degrees C) level during the elevation of ambient CO2. These data indicate that heat-stress-induced depression of miduterine arterial flow is vasoactively regulated, and cause-effect related to both arterial pH and PCO2, and thermoregulatory shunting of blood to heat-dissipating surfaces.
Alkalosis, Respiratory↗
Effects of dietary energy level and supplemental protein source on performance of growing steers and nutrient digestibility and nitrogen balance in lambs.
Four experiments were conducted to evaluate three crude protein (CP) sources (urea, U; soybean meal, SBM; corn gluten meal, CGM) in diets based on corn silage (high energy) or grass hay (low energy). In Exp. 1 and 2, growing steers were fed all combinations of energy and protein source at 10.5 or 12% CP. Steers fed high energy diets or 12% CP had improved (P less than .05) daily gains and feed:gain over 84 d. Protein source had no effect (P greater than .05) on performance except that steers fed U consumed more (P less than .05) feed than those fed CGM. Steers were fed experimental diets to a common weight and switched to an 85% concentrate diet for finishing. During finishing, steers fed low energy diets in the growing period consumed more (P less than .05) feed and had increased (P less than .05) feed:gain compared with those fed high energy diets. Growing lambs were fed the same diets as steers. At 10.5% CP, lambs fed high energy diets had higher (P less than .05) digestibilities of dry matter (DM), organic matter (OM), nitrogen (N) and fiber components, and retained more (P less than .05) N. For lambs on 12% CP, high energy diets had higher (P less than .05) DM and OM digestibilities and lower (P less than .05) N digestibilities. At 12% CP, energy level had no effect (P greater than .05) on N retained. Protein source had no effect (P greater than .05) on N retention. There appeared to be no advantage in supplementing with ruminally undegradable proteins, i.e. CGM, in these experiments.
Animals↗
Mixed-model analysis of a censored normal distribution with reference to animal breeding.
A mixed-model procedure for analysis of censored data assuming a multivariate normal distribution is described. A Bayesian framework is adopted which allows for estimation of fixed effects and variance components and prediction of random effects when records are left-censored. The procedure can be extended to right- and two-tailed censoring. The model employed is a generalized linear model, and the estimation equations resemble those arising in analysis of multivariate normal or categorical data with threshold models. Estimates of variance components are obtained using expressions similar to those employed in the EM algorithm for restricted maximum likelihood (REML) estimation under normality.
Analysis of Variance↗
Correlations between parities for lactation traits in United States dairy goats.
Correlations between parities for milk yield, fat yield, and days in milk were calculated across and within does for five breeds of United States dairy goats; Alpine, LaMancha, Saanen, and Toggenburg, using lactation records to January 1981. Records were initiated during 1966 through 1979 and had between 125 and 305 d in milk. Parities were first through fourth, and fifth or greater. Overall phenotypic correlations between the three lactation traits averaged across breed were .95 between milk and fat yield and about .60 between milk or fat yield and days in milk. Within-herd phenotypic partial correlations between parities 1 and 2 (the two parities with most data) averaged .47 for milk yield, .42 for fat yield, and .07 for days in milk. Components of variance due to herd averaged about 34% for milk yield and for fat yield and 23% for days in milk. Components of variance due to doe/herd averaged 28% for milk yield, 25% for fat yield, and 17% for days in milk. Repeatabilities averaged .42 for milk yield, .38 for fat yield, and .22 for days in milk.
Animals↗
Random-effects models for binary responses.
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Analysis of Variance↗
The Laurence-Moon-Biedl syndrome in a Singhalese family.
The first published occurrence of the Laurence-Moon-Biedl Syndrome in a Singhalese family is reported. Three members of a family of six with first cousin non-affected parents are described along with studies to indicate that the hypogonadism in this family can be ascribed to hypogonadotrophism. The high incidence of congenital heart disease and genito-urinary abnormalities noted by other is confirmed.
Adolescent↗
Arsenic poisoning--an occupational hazard.
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Adult↗