Biomedical subjects

Plant Genome Sizing Collective

Publications and source records attributed to Plant Genome Sizing Collective.

18 recordsLinked to original sources

PubMed2026

The genome sequence of Frangula alnus Mill., 1768 (Rosales: Rhamnaceae).

We present a genome assembly of Frangula alnus (alder buckthorn; Streptophyta; Magnoliopsida; Rosales; Rhamnaceae). The assembly consists of two haplotypes with total lengths of 279.06 megabases and 281.25 megabases. Most of haplotype 1 (99.91%) is scaffolded into 10 chromosomal pseudomolecules. Most of haplotype 2 (99.91%) is scaffolded into 10 chromosomal pseudomolecules. The mitochondrial sequence has a length of 492.03 kilobases and the plastid genome assembly has a length of 161.23 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Frangula alnus↗

PubMed2026

The genome sequence of Quercus petraea Liebl., 1784 (Fagales: Fagaceae).

We present a genome assembly of Quercus petraea (sessile oak; Streptophyta; Magnoliopsida; Fagales; Fagaceae). The assembly consists of two haplotypes with total lengths of 823.57 megabases and 815.09 megabases. Most of haplotype 1 (99.41%) is scaffolded into 12 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial sequence has a length of 349.29 kilobases and the plastid genome assembly has a length of 161.18 kilobases. Gene annotation of this assembly on Ensembl identified 32 253 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Fagales↗

PubMed2026

The genome sequence of Aquilegia vulgaris L., 1753 (Ranunculales: Ranunculaceae).

We present a genome assembly of Aquilegia vulgaris (Columbine; Streptophyta; Magnoliopsida; Ranunculales; Ranunculaceae). The assembly consists of two haplotypes with total lengths of 296.10 megabases and 289.22 megabases. Most of haplotype 1 (98.81%) is scaffolded into 7 chromosomal pseudomolecules. Most of haplotype 2 (94.35%) is scaffolded into 7 chromosomal pseudomolecules. The mitochondrial sequences have lengths of 388.22 and 83.91 kilobases and the plastid genome assembly has a length of 161.5 kilobases. Gene annotation of this assembly on Ensembl identified 23 898 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Aquilegia vulgaris↗

PubMed2026

The genome sequence of Filago lutescens Jord., 1846 (Asterales: Asteraceae).

We present a genome assembly of Filago lutescens (Red-tipped Cudweed; Streptophyta; Magnoliopsida; Asterales; Asteraceae). The assembly consists of two haplotypes with total lengths of 648.45 megabases and 646.22 megabases. Most of haplotype 1 (99.77%) is scaffolded into 14 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial sequence has a length of 225.84 kilobases and the plastid genome assembly has a length of 151.54 kilobases. Gene annotation of this assembly on Ensembl identified 38 942 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Asterales↗

PubMed2026

The genome sequence of Hyocomium armoricum (Brid.) Wijk & Margad. (Hypnales: Hypnaceae).

We present a genome assembly of Hyocomium armoricum (Flagellate Feather-moss; Streptophyta; Bryopsida; Hypnales; Hypnaceae). The genome sequence has a total length of 333.60 megabases. Most of the assembly (99.59%) is scaffolded into 11 chromosomal pseudomolecules. The mitochondrial sequence has a length of 104.43 kilobases and the plastid genome assembly has a length of 123.84 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Flagellate Feather-moss↗

PubMed2026

The genome sequence of Hypericum androsaemum L., 1753 (Malpighiales: Hypericaceae).

We present a genome assembly of Hypericum androsaemum (Tutsan; Streptophyta; Magnoliopsida; Malpighiales; Hypericaceae). The genome sequence has a total length of 384.54 megabases. Most of the assembly (99.96%) is scaffolded into 20 chromosomal pseudomolecules. The mitochondrial sequences have lengths of 138.63, 75.57, 98.15 and 103.38 kilobases and the plastid genome assembly has a length of 165.0 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Hypericum androsaemum↗

PubMed2026

The genome sequence of Veronica verna L., 1753 (Lamiales: Plantaginaceae).

We present a genome assembly of Veronica verna (Spring Speedwell; Streptophyta; Magnoliopsida; Lamiales; Plantaginaceae). The genome sequence has a total length of 463.88 megabases. Most of the assembly (98.85%) is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial sequence has a length of 311.81 kilobases and the plastid genome assembly has a length of 149.82 kilobases. Gene annotation of this assembly on Ensembl identified 22 903 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Asterales↗

PubMed2026

The genome sequence of Gnaphalium uliginosum L., 1753 (Asterales: Asteraceae).

We present a genome assembly of Gnaphalium uliginosum (marsh cudweed; Streptophyta; Magnoliopsida; Asterales; Asteraceae). The genome sequence has a total length of 354.38 megabases. Most of the assembly (98.86%) is scaffolded into 7 chromosomal pseudomolecules. The mitochondrial sequence has a length of 195.0 kilobases and the plastid genome assembly has a length of 152.8 kilobases. Gene annotation of this assembly on Ensembl identified 24 149 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Asterales↗

PubMed2026

The genome sequence of Acaena ovalifolia Ruiz & Pav., 1798 (Rosales: Rosaceae).

We present a genome assembly of Acaena ovalifolia (Two-spined Acaena; Streptophyta; Magnoliopsida; Rosales; Rosaceae). The assembly consists of two haplotypes with total lengths of 687.12 megabases and 687.19 megabases. Most of haplotype 1 (99.59%) is scaffolded into 21 chromosomal pseudomolecules. Most of haplotype 2 (99.12%) is scaffolded into 21 chromosomal pseudomolecules. The mitochondrial sequence has a length of 365.03 kilobases and the plastid genome assembly has a length of 156.05 kilobases. Gene annotation of this assembly on Ensembl identified 51 813 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Acaena ovalifolia↗

PubMed2026

The genome sequence of Schoenoplectus triqueter (L.) Palla, 1888 (Poales: Cyperaceae).

We present a genome assembly of Schoenoplectus triqueter (Triangular Club-rush; Streptophyta; Magnoliopsida; Poales; Cyperaceae). The genome sequence has a total length of 580.26 megabases. Most of the assembly (98.75%) is scaffolded into 21 chromosomal pseudomolecules. Five mitochondrial sequences and the plastid genome were also assembled. Gene annotation of this assembly on Ensembl identified 31 746 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Poales↗

PubMed2026

The genome sequence of Quercus cerris L., 1753 (Fagales: Fagaceae).

We present a genome assembly of Quercus cerris (Turkey oak; Streptophyta; Magnoliopsida; Fagales; Fagaceae). The genome sequence has a total length of 777.39 megabases. Most of the assembly (99.89%) is scaffolded into 12 chromosomal pseudomolecules. The mitochondrial sequences have lengths of 380.47 and 15.0 kilobases and the plastid genome assembly has a length of 161.2 kilobases. Gene annotation of this assembly on Ensembl identified 25 805 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Fagales↗

PubMed2026

The genome sequence of Vicia sativa L., 1753 (Fabales: Fabaceae).

We present a genome assembly of Vicia sativa (Narrowleaf Vetch; Streptophyta; Magnoliopsida; Fabales; Fabaceae). The assembly consists of two haplotypes with total lengths of 1 748.92 megabases and 1 751.13 megabases. Most of haplotype 1 (98.95%) is scaffolded into 6 chromosomal pseudomolecules. Haplotype 2 was assembled to scaffold level. The mitochondrial sequence has a length of 405.76 kilobases and the plastid genome assembly has a length of 124.62 kilobases. Gene annotation of this assembly on Ensembl identified 11 105 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Fabales↗

PubMed2026

The genome sequence of Carex sylvatica Huds., 1762 (Poales: Cyperaceae).

We present a genome assembly of Carex sylvatica (Wood-sedge; Streptophyta; Magnoliopsida; Poales; Cyperaceae). The genome sequence has a total length of 363.24 megabases. Most of the assembly (99.79%) is scaffolded into 29 chromosomal pseudomolecules. The mitochondrial sequences have lengths of 1715.64, 74.78 and 77.37 kilobases and the plastid genome assembly has a length of 215.14 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Carex sylvatica↗

PubMed2026

The genome sequence of Prunus padus L., 1753 (Rosales: Rosaceae).

We present a genome assembly of Prunus padus (bird cherry; Streptophyta; Magnoliopsida; Rosales; Rosaceae). The genome sequence has a total length of 454.49 megabases. Most of the assembly (97.36%) is scaffolded into 16 chromosomal pseudomolecules. The mitochondrial sequences have lengths of 280.28 and 155.92 kilobases and the plastid genome assembly has a length of 158.96 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Prunus padus↗

PubMed2026

The genome sequence of Euphorbia lathyris L., 1753 (Malpighiales: Euphorbiaceae).

We present a genome assembly of Euphorbia lathyris (caper spurge; Streptophyta; Magnoliopsida; Malpighiales; Euphorbiaceae). The genome sequence has a total length of 1 020.39 megabases. Most of the assembly (99.88%) is scaffolded into 10 chromosomal pseudomolecules. The mitochondrial sequences have lengths of 886.36, 41.02, 86.31 and 32.73 kilobases and the plastid genome assembly has a length of 163.75 kilobases. Gene annotation of this assembly on Ensembl identified 26 361 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Euphorbia lathyris↗

PubMed2026

The genome sequence of Sphagnum contortum Schultz, 1819 (Sphagnales: Sphagnaceae).

We present a genome assembly of Sphagnum contortum (twisted bog-moss; Streptophyta; Sphagnopsida; Sphagnales; Sphagnaceae). The genome sequence has a total length of 370.55 megabases. Most of the assembly (99.46%) is scaffolded into 21 chromosomal pseudomolecules. The mitochondrial sequence has a length of 141.7 kilobases and the plastid genome assembly has a length of 140.11 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Sphagnales↗

PubMed2026

The genome sequence of Sphagnum tenellum (Brid.) Bory, 1819 (Sphagnales: Sphagnaceae).

We present a genome assembly of Sphagnum tenellum (soft bog-moss; Streptophyta; Sphagnopsida; Sphagnales; Sphagnaceae). The genome sequence has a total length of 386.16 megabases. Most of the assembly (98.04%) is scaffolded into 21 chromosomal pseudomolecules. The mitochondrial sequence has a length of 141.31 kilobases and the plastid genome assembly has a length of 140.16 kilobases. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Sphagnales↗

PubMed2026

The genome sequence of Cardamine flexuosa With., 1796 (Brassicales: Brassicaceae).

We present a genome assembly of Cardamine flexuosa (Wavy Bitter-cress; Streptophyta; Magnoliopsida; Brassicales; Brassicaceae). The genome sequence has a total length of 204.54 megabases. Most of the assembly (97.53%) is scaffolded into 8 chromosomal pseudomolecules. The mitochondrial sequence has a length of 299.98 kilobases and the plastid genome assembly has a length of 153.92 kilobases. Gene annotation of this assembly on Ensembl identified 24 305 protein-coding genes. This assembly was generated as part of the Darwin Tree of Life project, which produces reference genomes for eukaryotic species found in Britain and Ireland.

Brassicales↗