Biomedical subjects

P Pieranski

Publications and source records attributed to P Pieranski.

At least 19 recordsLinked to original sources

PubMed2006

Exploring the facets of "soft crystals" using an Atomic Force Microscope.

We obtained monocrystalline droplets in a thermotropic cubic phase, of approximate size 100 microm, deposited on a flat surface. The facets of these soft crystals are explored using both an optical microscope and an AFM. The height of individual steps on the principal facets and the lateral distance between steps in vicinal facets are measured using AFM in imaging (tapping) mode. Moreover, the elastic modulus is measured locally, using the AFM tip (in contact mode) as a local rheological probe.

Crystallization↗

PubMed2006

Anisotropic surface melting in lyotropic cubic crystals: part 2: facet-by-facet melting at Ia3d/vapor interfaces.

From experiments with metal crystals, in the vicinity of their crystal/liquid/vapor triple points, it is known that melting of crystals starts on their surfaces and is anisotropic. Recently, we have shown that anisotropic surface melting occurs also in lyotropic systems. In our previous paper (Eur. Phys. J. E 19, 223 (2006)), we have focused on the case of poor faceting at the Pn3m/L1 interface in C12EO2/water binary mixtures. There anisotropic melting occurs in the vicinity of a Pn3m/L3/L1 triple point. In the present paper, we focus on the opposite case of a rich devil's-staircase-type faceting at Ia3d/vapor interfaces in monoolein/water and phytantriol/water mixtures. We show that anisotropic surface melting takes place in these systems in a narrow humidity range close to the Ia3d-L2 transition. As whole (hkl) sets of facets disappear one after another when the transition is approached, surface melting occurs in a facet-by-facet type.

Anisotropy↗

PubMed2006

Anisotropic surface melting in lyotropic cubic crystals. Part 1: Pn3m/L1 interface, poor faceting.

From experiments with ice or metal crystals, in the vicinity of their crystal/liquid/vapor triple points, it is known that melting of crystals starts on their surfaces and is anisotropic. It is shown here by direct observations under an optical microscope that this anisotropic surface melting phenomenon occurs also in lyotropic systems. In the case of C12EO2/water mixture, it takes place in the vicinity of the peritectic Pn3m/L3/L1 triple point. Above the peritectic triple point, where the Pn3m and L1 phases coexist in the bulk, the surface of a Pn3m-in-L1 crystal is composed of (111)-type facets surrounded by rough surfaces. The angular junction suggests that rough surfaces are wet by a L3-like layer while facets stay "dry". This is analogous to the pre-melting at rough surfaces in solid crystals. Upon cooling below the peritectic triple point, where L3 and L1 phases coexist in the bulk, a thick layer of the L3 phase grows from the pre-melted, rough Pn3m/L1 interface. Simultaneously, facets stay dry and their radius decreases. In this tri-phasic configuration, stable in a narrow temperature range, the L3/L1 and L3/Pn3m interfaces have shapes of constant mean curvature surfaces having common borders: edges of facets.

Journal Article↗

PubMed2004

Ratchet effect in faceting: a growth of perfect lyotropic crystals by temperature cycles.

The paper deals with a new phenomenon, named ratchet effect, envisioned theoretically as a likely consequence of metastability of crystal facets and expected to occur upon a temperature cycling. In experiments, Pn3m lyotropic crystals surrounded by the isotropic L1 phase in the mixture C(12)EO(2)/water are used. At equilibrium, the Pn3m/L1 interface contains small (111)-type facets in coexistence with rough surfaces. In agreement with theoretical expectations, it is shown that upon a saw-tooth-shaped temperature cycling, facets are growing until the rough surfaces are completely eliminated. A model of the ratchet effect is proposed.

Journal Article↗

PubMed2003

Concave and convex shapes of the Pn3m/L1 interface.

Shapes of the interface between the L1 and cubic Pn3 m phases in the mixture C(12)EO(2)/water are studied. The concave and convex variants of the interface are realised using Pn3 m crystals surrounded by the L1 phase and L1 inclusions on surfaces and in the bulk of the Pn3 m phase. It is shown that both variants of the Pn3 m/L1 interface contain the (111)-type facets in coexistence with everywhere else rough surfaces. The matching between facets and curved parts of the interface is angular. In the vicinity of the upper limit of the L1 + Pn3 m coexistence domain, additional (200)-type facets appear on the interface. The influence of the contact angle at glass walls on shapes of crystals and of inclusions is discussed.

Journal Article↗

PubMed2001

Ideal trefoil knot.

A set of self-contact points of the most tight, parametrically tied trefoil knot is determined. The knot is subjected to further tightening procedure based on the shrink-on-no-overlaps algorithm. Changes in the structure of the set of the self-contact points are monitored and the final form of the set is determined.

Journal Article↗

PubMed2000

Devil's staircase-type faceting of a cubic lyotropic liquid crystal

The faceting of monocrystals of the lyotropic cubic liquid crystals in equilibrium with a humid atmosphere is observed. Experiments reveal the presence of more than 60 different types of facets on the surface of a spherical crystal of radius R = 1 mm. The devil's staircase type of faceting has been predicted theoretically when the interaction between steps on the crystal surface is repulsive.

Journal Article↗

PubMed1998

Sedimentation and electrophoretic migration of DNA knots and catenanes.

Various site-specific recombination enzymes produce different types of knots or catenanes while acting on circular DNA in vitro and in vivo. By analysing the types of knots or links produced, it is possible to reconstruct the order of events during the reaction and to deduce the molecular "architecture" of the complexes that different enzymes form with DNA. Until recently it was necessary to use laborious electron microscopy methods to identify the types of knots or catenanes that migrate in different bands on the agarose gels used to analyse the products of the reaction. We reported recently that electrophoretic migration of different knots and catenanes formed on the same size DNA molecules is simply related to the average crossing number of the ideal representations of the corresponding knots and catenanes. Here we explain this relation by demonstrating that the expected sedimentation coefficient of randomly fluctuating knotted or catenated DNA molecules in solution shows approximately linear correlation with the average crossing number of ideal configurations of the corresponding knots or catenanes.

Centrifugation↗

PubMed1997

Properties of ideal composite knots.

The shortest tube of constant diameter that can form a given knot represents the 'ideal' form of the knot. Ideal knots provide an irreducible representation of the knot, and they have some intriguing mathematical and physical features, including a direct correspondence with the time-averaged shapes of knotted DNA molecules in solution. Here we describe the properties of ideal forms of composite knots-knots obtained by the sequential tying of two or more independent knots (called factor knots) on the same string. We find that the writhe (related to the handedness of crossing points) of composite knots is the sum of that of the ideal forms of the factor knots. By comparing ideal composite knots with simulated configurations of knotted, thermally fluctuating DNA, we conclude that the additivity of writhe applies also to randomly distorted configurations of composite knots and their corresponding factor knots. We show that composite knots with several factor knots may possess distinct structural isomers that can be interconverted only by loosening the knot.

Computer Simulation↗

PubMed1996