Biomedical subjects

Oleg A Vydrov

Publications and source records attributed to Oleg A Vydrov.

8 recordsLinked to original sources

PubMed2006

Assessment of a long-range corrected hybrid functional.

Common approximate exchange-correlation functionals suffer from self-interaction error, and as a result, their corresponding potentials have incorrect asymptotic behavior. The exact asymptote can be imposed by introducing range separation into the exchange component and replacing the long-range portion of the approximate exchange by the Hartree-Fock counterpart. The authors show that this long-range correction works particularly well in combination with the short-range variant of the Perdew-Burke-Ernzerhof (PBE) exchange functional. This long-range-corrected hybrid, here denoted LC-omegaPBE, is remarkably accurate for a broad range of molecular properties, such as thermochemistry, barrier heights of chemical reactions, bond lengths, and most notably, description of processes involving long-range charge transfer.

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PubMed2006

Influence of the exchange screening parameter on the performance of screened hybrid functionals.

This work reexamines the effect of the exchange screening parameter omega on the performance of the Heyd-Scuseria-Ernzerhof (HSE) screened hybrid functional. We show that variation of the screening parameter influences solid band gaps the most. Other properties such as molecular thermochemistry or lattice constants of solids change little with omega. We recommend a new version of HSE with the screening parameter omega=0.11 bohr(-1) for further use. Compared to the original implementation, the new parametrization yields better thermochemical results and preserves the good accuracy for band gaps and lattice constants in solids.

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PubMed2006

Spurious fractional charge on dissociated atoms: pervasive and resilient self-interaction error of common density functionals.

Semilocal density functional approximations for the exchange-correlation energy can improperly dissociate a neutral molecule XY (Y not =X) to fractionally charged fragments X(+q)...Y(-q) with an energy significantly lower than X0...Y0. For example, NaCl can dissociate to Na(+0.4)...Cl(-0.4). Generally, q is positive when the lowest-unoccupied orbital energy of atom Y0 lies below the highest-occupied orbital energy of atom X0. The first 24 open sp-shell atoms of the Periodic Table can form 276 distinct unlike pairs XY, and in the local spin density approximation 174 of these display fractional-charge dissociation. Finding these lowest-energy solutions with standard quantum chemistry codes, however, requires special care. Self-interaction-corrected (SIC) semilocal approximations are exact for one-electron systems and also reduce the spurious fractional charge q. The original SIC of Perdew and Zunger typically reduces q to 0. A scaled-down SIC with better equilibrium properties sometimes fails to reduce q all the way to 0. The desideratum of "many-electron self-interaction freedom" is introduced as a generalization of the one-electron concept.

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PubMed2006

Importance of short-range versus long-range Hartree-Fock exchange for the performance of hybrid density functionals.

We consider a general class of hybrid density functionals with decomposition of the exchange component into short-range and long-range parts. The admixture of Hartree-Fock (HF) exchange is controlled by three parameters: short-range mixing, long-range mixing, and range separation. We study how the variation of these parameters affects the accuracy of hybrid functionals for thermochemistry and kinetics. For the density functional component of the hybrids, we test three nonempirical approximations: local spin-density approximation, generalized gradient approximation (GGA), and meta-GGA. We find a great degree of flexibility in choosing the mixing parameters in range-separated hybrids. For the studied properties, short-range and long-range HF exchange seem to have a similar effect on the errors. One may choose to treat the long-range portion of the exchange by HF to recover the correct asymptotic behavior of the exchange potential and improve the description of density tail regions. If this asymptote is not important, as in solids, one may use screened hybrids, where long-range HF exchange is excluded. Screened hybrids retain most of the benefits of global hybrids but significantly reduce the computational cost in extended systems.

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PubMed2006

A simple method to selectively scale down the self-interaction correction.

The method of Perdew and Zunger is commonly used to correct the self-interaction error of approximate density functionals. However, it has been shown that this orbital-based self-interaction correction (SIC) tends to overcorrect and often impairs molecular properties. We have recently proposed a method to improve the performance of the SIC by scaling it down in many-electron regions. In this communication, we present a simplification of this scheme. For every occupied orbital, we introduce a scaling factor determined by the ratio of the orbital density to the total spin-density. Thus, the magnitude of the correction is adjusted depending on how much orbital densities overlap with one another. Such a modification of the Perdew-Zunger SIC does not add any appreciable time to the computation, but significantly improves the accuracy for a number of benchmark properties.

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PubMed2006

Scaling down the Perdew-Zunger self-interaction correction in many-electron regions.

Semilocal density functional approximations (DFAs) for the exchange-correlation energy suffer from self-interaction error, which is believed to be the cause of many of the failures of common DFAs, such as poor description of charge transfer and transition states of chemical reactions. The standard self-interaction correction (SIC) of Perdew and Zunger mends some of these failures but spoils such essential properties as thermochemistry and equilibrium bond lengths. The Perdew-Zunger SIC seems to overcorrect many-electron systems. In this paper, we propose a modified SIC, which is scaled down in many-electron regions. The new SIC has an improved performance for many molecular properties, including total energies, atomization energies, barrier heights of chemical reactions, ionization potentials, electron affinities, and bond lengths. The local spin-density approximation (LSDA) benefits from SIC more than higher-level functionals do. The scaled-down SIC has only one adjustable parameter. Rationalization of the optimal value of this parameter enables us to construct an almost-nonempirical version of the scaled-down SIC-LSDA, which is significantly better than uncorrected LSDA and even better than the uncorrected generalized gradient approximation. We present an analysis of the formal properties of the scaled-down SIC and define possible directions for further improvements. In particular, we find that exactness for all one-electron densities does not guarantee correct asymptotics for the exchange-correlation potential of a many-electron system.

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PubMed2005

Ionization potentials and electron affinities in the Perdew-Zunger self-interaction corrected density-functional theory.

Using a self-consistent implementation of the Perdew-Zunger self-interaction corrected (PZ-SIC) density-functional theory, we have calculated ionization potentials (IP) and electron affinities (EA) of first- and second-row atoms and a set of small molecules. Several exchange-correlation functionals were tested. IPs and EAs were obtained by two methods: as the difference in self-consistent field (SCF) energies of neutrals and ions (deltaSCF) and as negatives of highest-occupied orbital energies. We found that, except for local spin-density approximation, PZ-SIC worsens DeltaSCF IPs and EAs. On the other hand, PZ-SIC brings orbital eigenvalues into much better agreement with electron removal energies. The Perdew-Zunger SIC seems to over-correct many-electron systems; for molecules it performs worse than for atoms. We also discuss several common approximations to PZ-SIC such as spherical averaging of orbital densities in atoms.

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PubMed2004

Effect of the Perdew-Zunger self-interaction correction on the thermochemical performance of approximate density functionals.

The Perdew-Zunger self-interaction-corrected density functional theory (SIC-DFT) was implemented self-consistently using a quasi-Newton direct minimization method. We calculated SIC-DFT energies for a number of atoms and molecules using various approximate density functionals, including hybrids. Self-interaction errors (SIE) of these functionals were compared and analyzed in terms of contributions from valence and core orbitals. We also calculated enthalpies of formation of the standard G2-1 set of 55 molecules and found that self-interaction-correction (SIC) improves agreement with experiment only for the LSDA functional, while all other functionals show worse performance upon introducing SIC. This is the first systematic study of the effect of SIC on thermochemical properties. We found no direct connection between the magnitude of the SIE contained in a functional and its performance for thermochemistry. Approximate functionals with large self-interaction errors can accurately reproduce enthalpies of formation. Our results do not support the popular belief that a smaller SIE of hybrid functionals is the main reason for their higher accuracy.

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