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Biomedical subjects

Michael Small

Publications and source records attributed to Michael Small.

3 recordsLinked to original sources

Minimum description length neural networks for time series prediction.

Artificial neural networks (ANN) are typically composed of a large number of nonlinear functions (neurons) each with several linear and nonlinear parameters that are fitted to data through a computationally intensive training process. Longer training results in a closer fit to the data, but excessive training will lead to overfitting. We propose an alternative scheme that has previously been described for radial basis functions (RBF). We show that fundamental differences between ANN and RBF make application of this scheme to ANN nontrivial. Under this scheme, the training process is replaced by an optimal fitting routine, and overfitting is avoided by controlling the number of neurons in the network. We show that for time series modeling and prediction, this procedure leads to small models (few neurons) that mimic the underlying dynamics of the system well and do not overfit the data. We apply this algorithm to several computational and real systems including chaotic differential equations, the annual sunspot count, and experimental data obtained from a chaotic laser. Our experiments indicate that the structural differences between ANN and RBF make ANN particularly well suited to modeling chaotic time series data.

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Modeling continuous processes from data.

Experimental and simulated time series are necessarily discretized in time. However, many real and artificial systems are more naturally modeled as continuous-time systems. This paper reviews the major techniques employed to estimate a continuous vector field from a finite discrete time series. We compare the performance of various methods on experimental and artificial time series and explore the connection between continuous (differential) and discrete (difference equation) systems. As part of this process we propose improvements to existing techniques. Our results demonstrate that the continuous-time dynamics of many noisy data sets can be simulated more accurately by modeling the one-step prediction map than by modeling the vector field. We also show that radial basis models provide superior results to global polynomial models.

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Deterministic nonlinearity in ventricular fibrillation.

We provide numerical evidence that the electrocardiogram data collected from pigs during induced ventricular fibrillation cannot be described by a monotonic nonlinear transformation of linearly filtered noise. To establish this we use surrogate techniques and apply two test statistics: (1) the Takens' maximum likelihood estimator of the Grassberger-Procaccia correlation dimension and (2) an improved correlation dimension estimation routine. The improved dimension estimates provide evidence that the correlation dimension of the underlying dynamics during the episode of VF in the first 30 s is slightly less than 6. This result is consistent and reproducible among subjects. (c) 2000 American Institute of Physics.

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