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Biomedical subjects

Md Mahbubur Rahman

Publications and source records attributed to Md Mahbubur Rahman.

4 recordsLinked to original sources

Genome sequence of Staphylococcus epidermidis H1G7 from hilsa (Tenualosa ilisha) gut.

We report the genome of Staphylococcus epidermidis strain H1G7 from hilsa (Tenualosa Ilisha) fish gut. Nanopore sequencing produced a 2.5-Mb assembly (32% GC, two contigs). The genome encodes metal-chelate transport, short-chain fatty acid production, and biosynthetic clusters and lacks virulent factors, revealing genomic features potentially associated with beneficial host interactions.

cyclodipeptide synthase

Whole-genome sequence of Streptococcus agalactiae strain GIFTS31 isolated from streptococcosis-infected Nile tilapia in Bangladesh.

Streptococcus agalactiae strain GIFTS31 was isolated from a Nile tilapia infected with streptococcosis in Gazipur, Bangladesh. The draft genome of GIFTS31 comprises 2,039,674 bp with a GC content of 35% and encodes 1,957 predicted protein-coding sequences. The genome sequence provides valuable insights into the pathogenic potential of fish-associated S. agalactiae.

Streptococcus agalactiae

Draft genome sequence of Vibrio parahaemolyticus GISV1-1 associated with AHPND in Bangladesh.

Vibrio parahaemolyticus GISV1-1 was isolated from diseased shrimp with acute hepatopancreatic necrosis disease in Bangladesh. Its draft genome is 5,078,728 bp with 45% GC content. The genome exhibits several virulence-associated genes and the beta-lactam resistance gene blaCARB-33. It will enhance our understanding of pathogenesis and disease management in shrimp aquaculture.

AHPND

Draft genome sequence of Bacillus thuringiensis GIFSPR-111, a putative probiotic isolated from shrimp farm soil in Bangladesh.

Bacillus thuringiensis GIFSPR-111, isolated from shrimp farm soil in Shamnagar, Bangladesh, inhibits Vibrio parahaemolyticus, the causative agent of acute hepatopancreatic necrosis disease in shrimp and exhibits probiotic potential. The 5,608,442 bp draft genome contains multiple biosynthetic gene clusters, with potential to synthesize diverse bioactive metabolites.

Bacillus thuringiensis