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Biomedical subjects

M Rodgers

Publications and source records attributed to M Rodgers.

At least 19 recordsLinked to original sources

Antimicrobial-resistant Staphylococcus aureus isolated from Australian wildlife admitted to a veterinary hospital.

Although antimicrobial resistance (AMR) is a growing One Health concern, little is known about AMR in Staphylococcus aureus from Australian wildlife. This study investigated the occurrence, phenotypic AMR profiles, and genetic characteristics of S. aureus from six representative Australian wildlife species admitted to a wildlife hospital in Western Australia, including the western grey kangaroo (Macropus fuliginosus), quenda (Isoodon fusciventer), pelican (Pelecanus conspicillatus), galah (Eolophus roseicapilla), shingleback skink (Tiliqua rugosa) and long-necked turtle (Chelodina colliei). Staphylococcus aureus was isolated from 11.7% (21/180, 95% CI: 7.4%-17.3%) of the animals on admission. Whole genome sequencing identified 13 multi-locus sequence types (STs) and various virulence factors, including the human-specific immune evasion cluster (IEC). Resistance to at least one antimicrobial class was observed in 63.6% of the isolates. The blaZ, erm(T), aac(6')-aph(2″), and tet(L) AMR genes were detected in 63.6%, 13.6%, 4.5%, and 4.5% of S. aureus, respectively. After 7 days of hospitalisation, S. aureus was isolated from 16.5% (16/97, 95% CI: 9.7%-25.4%) of the animals, including two methicillin-resistant S. aureus (MRSA) isolated from two pelicans. The two MRSA were identified as community-associated MRSA clones (mecA-positive ST1-IV and ST93-IV), suggesting direct or indirect transmission between humans and wildlife during hospitalisation may have occurred. This study highlighted Australian wildlife may be a potential reservoir for genetically diverse antimicrobial-resistant S. aureus. AMR surveillance including wildlife using a One Health approach may be required.

Animals↗

Treatment of dairy wastewater using constructed wetlands and intermittent sand filters.

In Ireland, the most common method of disposal of dairy parlour washings is by land spreading. This treatment method has numerous problems, namely high-labour requirements and the potential for eutrophication of surface and ground waters. Constructed wetlands are commonly used for treatment of secondary municipal wastewaters and they have been gaining popularity for treatment of agricultural wastewaters in Ireland. Intermittent sand filtration may offer an alternative to traditional treatment methods. As well as providing comparable treatment performance, they also have a smaller footprint, due to the substantially higher organic loading rates that may be applied to their surfaces. This paper discusses the performance and design criteria of constructed wetlands for the treatment of domestic and agricultural wastewater, and sand filters for the treatment of domestic wastewater. It also proposes sand filtration as an alternative treatment mechanism for agricultural wastewater and suggests design guidelines.

Animals↗

Performance of a stratified sand filter in removal of chemical oxygen demand, total suspended solids and ammonia nitrogen from high-strength wastewaters.

A stratified sand filter column, operated in recirculation mode and treating synthetic effluent resembling high-strength dairy wastewaters was studied over a 342-d duration. The aim of this paper was to examine the organic, total suspended solids (TSS) and nutrient removal rates of the sand filter, operated in recirculation mode, under incrementally increasing hydraulic and organic loading rates and to propose a field filter-sizing criterion. Best performance was obtained at a system hydraulic loading rate of 10 L m(-2) d(-1); a higher system hydraulic loading rate (of 13.4 L m(-2) d(-1)) caused surface ponding. The system hydraulic loading rate of 10 L m(-2) d(-1) gave a filter chemical oxygen demand (COD), TSS, and total kjeldahl nitrogen (TKN) loading rate of 14, 3.7, and 2.1 g m(-2) d(-1), respectively, and produced consistent COD and TSS removals of greater than 99%, and an effluent NO(3)-N concentration of 42 mg L(-1) (accounting for an 86% reduction in total nitrogen (Tot-N)). As the proportional surface area requirement for the sand filter described in this study is less than the recommended surface area requirement of a free-water surface (FWS) wetland treating an effluent of similar quality, it could provide an economic and sustainable alternative to conventional wetland treatment.

Dairying↗

Organic carbon and nitrogen removal from a strong wastewater using a denitrifying suspended growth reactor and a horizontal-flow biofilm reactor.

Recirculation of fully nitrified effluent from a laboratory horizontal-flow biofilm reactor (HFBR) to a mixed pre-denitrification reactor (DR) was used to remove organic carbon and nitrogen from synthetic dairy wastewater. Three recirculation ratios of 2, 4, and 6 were examined in this study and the average filtered chemical oxygen demand (CODf) and total nitrogen (TN) removals were up to 97.4% and 85.5%, respectively, at 11 degrees C. In the DR, the nitrate nitrogen removal efficiencies and rates were 86-96% and 22-34 g N/m3 d. In the HFBR, the ammonium nitrogen removal rates were 293-337 mg N/m2 d.

Biofilms↗

Synthetic dairy wastewater treatment using a new horizontal-flow biofilm reactor.

The aim of this study was to develop a simple biological system that would be suitable for the treatment of dairy parlour wash waters. A novel horizontal-flow biofilm system was designed, constructed and tested in the laboratory for organic carbon and nitrogen removal from a synthetic dairy wastewater with average filtered chemical oxygen demand (CODf) of 2947.7 mg/L and total nitrogen (TN) of 295.5 mg/L. The novel biofilm system consisted of two reactor units one on top of the other. Each reactor unit comprised a stack of horizontal plastic sheets placed above one another that were supported and separated by vertical plastic cone frustums, which were formed in the sheets during manufacture. The wastewater was pumped onto the top sheet of the top reactor unit at hourly intervals for a 5-minute period and flowed over and back along alternate sheets down through the 2 units. The top unit had 8 plastic sheets and 25 mm high frustums to cater for heavy biofilm growth, and the bottom unit had 17 sheets and 11 mm high frustums for thinner biofilm growth. The organic loading of 57 g CODf/m2.d-based on the plan area of the system-was applied to the top reactor unit. When the reactor process reached pseudo steady-state, about 96% CODf, 71% TN and 100% ammonium nitrogen were removed. Low solids production occurred. The system was simple and easy to construct and operate.

Biofilms↗

The performance of fibrous peat biofilters in treating domestic strength wastewater.

Peat is an abundant resource in Ireland and has the capacity to be used in low-cost, low-maintenance wastewater treatment systems for single houses. In this study four fibrous peat columns, of varying depths were constructed and tested in the laboratory for their capacity to remove contaminants from domestic-strength synthetic wastewater. The four filters had peat depths of 0.3 m, 0.6 m, 0.9 m and 1.2 m. During the 360 day study the filters were intermittently loaded with domestic strength synthetic wastewater at a hydraulic loading rate of 180 l/m2cd. Hydrographs and residence times for each filter were examined as was their ability to remove impurities from the wastewater. Removal of 5-day biochemical oxygen demand (BOD5) and total chemical oxygen demand (CODt) were > or =96% and 84%, respectively, in all filters with almost complete nitrification (> or =99%) being recorded for each filter. The removal of total suspended solids (TSS) was excellent at > or =94% and no clogging was recorded on any filter during the study. For the 0.6 m, 0.9 m and 1.2 m deep filters, total viable counts (TVC) were less than EU surface water directive limits for Class A2 potable water sources. The systems were cheap to construct and very easy to maintain.

Adsorption↗

Diagnostic tests and algorithms used in the investigation of haematuria: systematic reviews and economic evaluation.

OBJECTIVES: To determine the most effective diagnostic strategy for the investigation of microscopic and macroscopic haematuria in adults. DATA SOURCES: Electronic databases from inception to October 2003, updated in August 2004. REVIEW METHODS: A systematic review was undertaken according to published guidelines. Decision analytic modelling was undertaken, based on the findings of the review, expert opinion and additional information from the literature, to assess the relative cost-effectiveness of plausible alternative tests that are part of diagnostic algorithms for haematuria. RESULTS: A total of 118 studies met the inclusion criteria. No studies that evaluated the effectiveness of diagnostic algorithms for haematuria or the effectiveness of screening for haematuria or investigating its underlying cause were identified. Eighteen out of 19 identified studies evaluated dipstick tests and data from these suggested that these are moderately useful in establishing the presence of, but cannot be used to rule out, haematuria. Six studies using haematuria as a test for the presence of a disease indicated that the detection of microhaematuria cannot alone be considered a useful test either to rule in or rule out the presence of a significant underlying pathology (urinary calculi or bladder cancer). Forty-eight of 80 studies addressed methods to localise the source of bleeding (renal or lower urinary tract). The methods and thresholds described in these studies varied greatly, precluding any estimate of a 'best performance' threshold that could be applied across patient groups. However, studies of red blood cell morphology that used a cut-off value of 80% dysmorphic cells for glomerular disease reported consistently high specificities (potentially useful in ruling in a renal cause for haematuria). The reported sensitivities were generally low. Twenty-eight studies included data on the accuracy of laboratory tests (tumour markers, cytology) for the diagnosis of bladder cancer. The majority of tumour marker studies evaluated nuclear matrix protein 22 or bladder tumour antigen. The sensitivity and specificity ranges suggested that neither of these would be useful either for diagnosing bladder cancer or for ruling out patients for further investigation (cystoscopy). However, the evidence remains sparse and the diagnostic accuracy estimates varied widely between studies. Fifteen studies evaluating urine cytology as a test for urinary tract malignancies were heterogeneous and poorly reported. The calculated specificity values were generally high, suggesting some possible utility in confirming malignancy. However, the evidence suggests that urine cytology has no application in ruling out malignancy or excluding patients from further investigation. Fifteen studies evaluated imaging techniques [computed tomography (CT), intravenous urography (IVU) or ultrasound scanning (US)] to detect the underlying cause of haematuria. The target condition and the reference standard varied greatly between these studies. The diagnostic accuracy data for several individual studies appeared promising but meaningful comparison of the available imaging technologies was impossible. Eight studies met the inclusion criteria but addressed different parts of the diagnostic chain (e.g. screening programmes, laboratory investigations, full urological work-up). No single study addressed the complete diagnostic process. The review also highlighted a number of methodological limitations of these studies, including their lack of generalisability to the UK context. Separate decision analytic models were therefore developed to progress estimation of the optimal strategy for the diagnostic management of haematuria. The economic model for the detection of microhaematuria found that immediate microscopy following a positive dipstick test would improve diagnostic efficiency as it eliminates the high number of false positives produced by dipstick testing. Strategies that use routine microscopy may be associated with high numbers of false results, but evidence was lacking regarding the accuracy of routine microscopy and estimates were adopted for the model. The model for imaging the upper urinary tract showed that US detects more tumours than IVU at one-third of the cost, and is also associated with fewer false results. For any cause of haematuria, CT was shown to have a mean incremental cost-effectiveness ratio of pounds sterling 9939 in comparison with the next best option, US. When US is followed up with CT for negative results with persistent haematuria, it dominates the initial use of CT alone, with a saving of pounds sterling 235,000 for the evaluation of 1000 patients. The model for investigation of the lower urinary tract showed that for low-risk patients the use of immediate cystoscopy could be avoided if cystoscopy were used for follow-up patients with a negative initial test using tumour markers and/or cytology, resulting in a saving of pounds sterling 483,000 for the evaluation of 1000 patients. The clinical and economic impact on delayed detection of both upper and lower urinary tract tumours through the use of follow-up testing should be evaluated in future studies. CONCLUSIONS: There are insufficient data currently available to derive an evidence-based algorithm of the diagnostic pathway for haematuria. A hypothetical algorithm based on the opinion and practice of clinical experts in the review team, other published algorithms and the results of economic modelling is presented in this report. This algorithm is presented, for comparative purposes, alongside current US and UK guidelines. The ideas contained in these algorithms and the specific questions outlined should form the basis of future research. Quality assessment of the diagnostic accuracy studies included in this review highlighted several areas of deficiency.

Algorithms↗

Nitrification in a vertically moving biofilm system.

A laboratory continuous feed biofilm reactor, comprising a bulk fluid reactor, a biofilm plastic module, a feed tank, and pneumatic devices and controls, was operated for a total period of 257 days, including seeding time, to treat domestic-strength synthetic wastewater under increasing ammonium nitrogen (NH(4)(+)--N) loading rates, ranging from 0.17+/-0.01 (0.71+/-0.06 gm(-2)d(-1)) to 0.70+/-0.02 kgm(-3)d(-1) (2.9+/-0.1 gm(-2)d(-1)). The biofilm plastic module was moved vertically in and out of the wastewater in continuous cycles. The maximum NH(4)(+)-N removal rate was reached during the maximum loading phase, when a NH(4)(+)--N loading rate of 0.70+/-0.02 kgm(-3)d(-1) (2.9+/-0.1 gm(-2)d(-1)) was applied to the system. During this loading period, the average NH(4)(+)--N removal rate was 0.30+/-0.10 kgm(-3)d(-1) (1.30+/-0.40 gm(-2)d(-1)).

Ammonium Chloride↗

Organic carbon removal and nitrification of high strength wastewaters using stratified sand filters.

The current practice of spray irrigation of dairy parlour wastewaters is laborious and time consuming. Intermittent sand filtration systems may offer an alternative to spray irrigation when designed to remove organic carbon, nitrogen, phosphorus, coliforms and viruses from such wastewaters to allow discharge of the final effluent directly into receiving waters without damage to the environment. In this study two instrumented stratified sand filter columns (0.425 and 0.9 m deep, and both 0.3 m in diameter) were intermittently loaded for 439 days with synthetic dairy parlour washings at a number of hydraulic and organic loading rates. At a biochemical oxygen demand (BOD) loading of 22 g m(-2) d(-1), over 92% of the BOD and suspended solids in the wastewater was removed in the two filters and nitrification was complete. The 0.9 m column had a sustained ability to adsorb the influent phosphorus during the study period; however, the phosphorus adsorption capacity of the 0.425 m column began to decrease after approximately 30 days. Biomass, comprising hydrated extracellular polymers (exopolymers) and living and dead cells, accumulated in the 0.9 m column; it was assessed by sodium bromide tracer studies and by variations in the sand volumetric water contents using time domain reflectometry (TDR). The biomass growth increased the retention time of the wastewater in the filter media, and occurred mainly at the top of the first sand layer. Intermittent stratified sand filters appear to offer an effective and sustainable treatment process for the removal of BOD from high-strength wastewaters, and for the complete nitrification of ammonium.

Adsorption↗

The efficiency of a sequencing batch biofilm reactor in organic carbon and phosphorus removal.

A laboratory sequencing batch biofilm reactor (SBBR), operated for a period of 158 days, was used to treat domestic-strength synthetic effluent. The biofilm reactor comprised a bulk fluid reactor, a biofilm plastic module, a synthetic wastewater feed tank, and pneumatic devices with pneumatic controls. The reactor cycle time was 8 h, and its operation consisted of five phases: feeding (59 min), mixing (1 min), anoxic/anaerobic (3 h), aerobic (3 h), and settling (1 h). At total chemical oxygen demand (CODT) loading rates of 8.8 g CODT m(-2) d(-1) and 1.2 kg CODT m(-3) d(-1), expressed in terms of the plastic module surface area and reactor volume, respectively, the SBBR had average removal rates of 8.3 g CODT m(-2) d(-1) and 1.1 kg CODT m(-3) d(-1), or 94%. Total orthophosphorus (PO4-PT) and filtered orthophosphorus (PO4-PF) removals were 44% and 50%, respectively.

Biofilms↗

Peritoneal gallstones following laparoscopic cholecystectomy: incidence, complications, and management.

BACKGROUND: Gallstone spillage during laparoscopic cholecystectomy (LC) is a common intraoperative event. Although gallstones left in the peritoneal cavity were initially considered harmless, a significant number of complications have been reported. Our aim was to quantify the likelihood, and to document the range, of subsequent complications. METHODS: A Medline search from 1987 to January 2003 was performed. Articles with more than 500 LCs that quantified the frequency of complications due to peritoneal gallstones were reviewed, as were representative case studies of different stated complications. RESULTS: Six studies, covering 18,280 LCs, were found. The incidence of gallbladder perforation was 18.3%, that of gallstone spillage was 7.3%, and that of unretrieved peritoneal gallstones was estimated to be 2.4%. There were 27 patients with complications. The likelihood of a complication when gallstone spillage occurred was 2.3%, which increased to 7.0% when unretrieved peritoneal gallstones were documented. CONCLUSION: Spilt gallstones have a small but quantifiably real risk of causing a wide range of significant postoperative problems.

Abscess↗

Nutrient removal in a sequencing batch biofilm reactor (SBBR) using a vertically moving biofilm system.

In this paper, the performance of a sequencing batch biofilm reactor (SBBR) using an anoxic/anaerobic phase followed by an aerobic phase for nutrient removal from wastewater was investigated. In the laboratory SBBR unit, biofilm was grown on a plastic biofilm media module, which was vertically moved up into the air and down into the bulk fluid during the aerobic phase. The vertical movement of the biofilm module supplied oxygen to the microorganisms. The module was submerged in the wastewater during the anoxic/anaerobic phase. The percentage removals of total chemical oxygen demand (COD), total nitrogen (TN) and soluble orthophosphate (PO4-P) were 95.4%, 68.3% and 89.5% respectively at influent concentrations of COD 773 mg l(-1), TN 49.9 mg l(-1) and PO4-P 16.5 mg l(-1). The effluent COD was 35 mg l(-1), NH4-N 10.2 mg l(-1), NO3-N 5.5 mg l(-1), soluble PO4-P 1.7 mg l(-1) and suspended solids (SS) 19 mg l(-1).

Biofilms↗

Organic carbon and ammonium nitrogen removal in a laboratory sand percolation filter.

The on-site treatment of wastewaters from single dwellings requires simple, low maintenance systems that reduce the chemical and biochemical oxygen demand (COD and BOD respectively), ammonium-nitrogen (NH4-N), orthophosphate (PO4-P), phosphorus (P), and microorganisms to acceptable concentrations. Sand filters have the potential to achieve these reductions. In this study, a sand tank model of a percolation trench and filter was constructed in the laboratory, loaded with wastewater, and monitored for a period of 293 days. The silty sand filter was seeded for 153 days with effluent from an aerobic biofilm treatment unit. The filter was then loaded with synthetic wastewater of domestic strength for 193 days, when the average organic and hydraulic loading rates on the percolation trench were 13.33 g BOD/m2 d and 75 L/m2 d respectively. Removal rates of 90% for total COD, 99.3% for BOD5, >99% for total NH4-N, 89% for total PO4-P, and 96% for total suspended solids (TSS) were recorded during the study. No excessive clogging of the sand filter was observed. During the study very good dispersion of the wastewater over the sand filter by the percolation trench was recorded. The sand filter was simple to construct and operate and achieved excellent results.

Biofilms↗

Distribution of six virulence factors in Aeromonas species isolated from US drinking water utilities: a PCR identification.

AIMS: To examine whether Aeromonas bacteria isolated from municipally treated water had virulence factor genes. METHODS AND RESULTS: A polymerase chain reaction-based genetic characterization determined the presence of six virulence factors genes, elastase (ahyB), lipase (pla/lip/lipH3/alp-1) flagella A and B (flaA and flaB), the enterotoxins, act, alt and ast, in these isolates. New primer sets were designed for all the target genes, except for act. The genes were present in 88% (ahyB), 88% (lip), 59% (fla), 43% (alt), 70% (act) and 30% (ast) of the strains, respectively. Of the 205 isolates tested only one isolate had all the virulence genes. There was a variety of combinations of virulence factors within different strains of the same species. However, a dominant strain having the same set of virulence factors, was usually isolated from any given tap in different rounds of sampling from a single tap. CONCLUSIONS: These results show that Aeromonas bacteria found in drinking water possess a wide variety of virulence-related genes and suggest the importance of examining as many isolates as possible in order to better understand the health risk these bacteria may present. SIGNIFICANCE AND IMPACT OF THE STUDY: This study presents a rapid method for characterizing the virulence factors of Aeromonas bacteria and suggests that municipally treated drinking water is a source of potentially pathogenic Aeromonas bacteria.

Aeromonas↗

A pilot plant study using a vertically moving biofilm process to treat municipal wastewater.

The pilot plant study comprised the construction and monitoring of a new vertically moving biofilm system (VMBS) for treating municipal wastewater. The system operated on site for 11 months. The biofilm module in this system, consisting of high surface area plastic media, was vertically and repeatedly moved in cycles up into the air and down into the wastewater. The vertical movement of the biofilm module supplied sufficient oxygen for the removal of the organic carbon in the wastewater. The overall physical oxygen transfer coefficient (Kla) measured at the cycle speed of six cycles per minute was 2.53 per hour. During the pilot study, dissolved oxygen (DO) concentrations in the bulk fluid were in the range of 1.5-5 mg/l. It was found that the areal removal rate of filtered chemical oxygen demand (COD) was up to 35 g COD/(m(2)day) and the bulk fluid volumetric filtered COD removal rate was 2.62 kg COD/(m(3)day). The field experiment showed that clogging commonly found in other biofilm systems did not occur in this system. The power consumption was in the range of 0.09-0.25 k Wh/m(3) wastewater flow, 0.40-2.19 k Wh/kg COD removal and 1.24-1.74 k Wh/kg BOD removal. The new biofilm system offers potential for reduced reactor volumes, energy saving, simple construction and easy operation.

Biofilms↗

Nitrogen removal using a vertically moving biofilm system.

The aim of this laboratory study was to establish the efficacy of a new experimental biofilm system for the removal of nitrogen from synthetic wastewater. The system consisted of six reactors in series: one anaerobic, one anoxic and four aerobic reactors. In both the anaerobic and anoxic reactors, a plastic cuboid module was repeatedly moved up and down in the wastewater, while being totally submerged at all times. In each of the aerobic reactors, an identical module to that used in the anaerobic and anoxic reactors was intermittently and repeatedly immersed in and lifted out of the wastewater. All the individual reactors had a bulk fluid volume of 28.2 litres and the average temperature of the wastewater was about 10 degrees C. Each module consisted of crossflow corrugated plastic sheets with a surface area of 1.824 m2. The nitrate recycle flow from the fourth aerobic tank to the anoxic tank was twice the inflow to that tank. In the anoxic reactor, filtered COD was removed at an average rate of 2.22 kg COD/m3 x d and nitrate-nitrogen was denitrified at a rate of 0.42 kg NO3-N/m3 x d. The average nitrification rate in the second aerobic reactor was 0.12 kg NH4-N/m3 x d. The new biofilm system was simple to construct and operate.

Bacteria, Aerobic↗

Liver resections in Auckland 1998-2001: mortality, morbidity and blood product use.

AIMS: There has been a marked increase in the number of liver resections undertaken at Auckland Hospital since 1998. Low central venous pressure anaesthesia was routinely used for liver resection during this period. The aim of this study was to review this experience, with particular emphasis on the peri-operative outcomes of morbidity, mortality and blood product use. METHODS: All patients undergoing liver resection from January 1998 to May 2001 were included in the review. Standardised data were collated retrospectively from hospital records and transferred to an electronic database for analysis. RESULTS: Of 123 patients undergoing liver resection, 113 were elctive and ten were urgent operations. 65% had major resections and 10% had synchronous extrahepatic surgery. There were three post-operative deaths (mortality 2.4%) due to liver failure and sepsis. One or more complications occurred in 68 patients (morbidity 55%). 72% did not receive a blood transfusion during their hospital stay. Only two of 113 elective patients required a massive blood transfusion (ten or more units). CONCLUSIONS: Mortality in the study period was low but morbidity remains significant. Blood product use was low in elective patients. These results compare well with those of specialised hepatobiliary units internationally.

Adolescent↗