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M P Coffey

Publications and source records attributed to M P Coffey.

At least 19 recordsLinked to original sources

Genetic parameters of growth in dairy cattle and associations between growth and health traits.

Body weight (BW) observations on dairy cattle taken on average 35 times between birth and 1,000 d of life were used to estimate daily heritabilities and predict daily breeding values for both pregnancy-adjusted BW (PABW) and growth rate. Daily heritabilities for PABW were moderate to high, ranging from 0.41 (+/-0.027) to 0.82 (+/-0.041). Daily heritabilities for growth rate were high (>0.68 +/- 0.034). The genetic association between various health events, including mastitis and lameness, and weight and growth was investigated by regressing the incidence of health events on breeding values for weight at birth, weaning, calving, and growth rate at 56 d after calving, growth rate at 110 d after calving, and maximum growth rate. Growth at weaning was the only BW measure to significantly affect mastitis (r(g) = 0.24), indicating that cows growing faster at weaning are more prone to mastitis. Increased weight (r(g) = 0.65) and growth rate at weaning (r(g) = 0.38) and increased maximum growth rate (r(g) = 0.71) all contributed to increased feet disorders. The only significant negative genetic association was obtained between reproduction and weight at calving (r(g) = -0.61).

Animals↗

Differences between primiparous and multiparous dairy cows in the inter-relationships between metabolic traits, milk yield and body condition score in the periparturient period.

During the early postpartum period dairy cows mobilize fat and muscle to support lactation. This is associated with alterations in blood metabolite and hormone profiles which in turn influence milk yield and fertility. This study developed models to determine how metabolic traits, milk yield and body condition score were inter-related at different times in the periparturient period and to compare these relationships in primiparous (PP, n=188) and multiparous (MP, n=312) cows. Data from four previous studies which included information on blood metabolic parameters, parity, milk yield, body condition score and diet were collated into a single dataset. Coefficients of polynomial equations were calculated for each trait between -1 week pre-calving and week +7 postpartum using residual maximum likelihood modelling. The completed dataset was used in a multiple correlation model to determine how the best fit curves were related to each other over time. PP cows had higher concentrations of insulin-like growth factor-I and lower beta-hydroxybutyrate concentrations throughout, higher leptin concentrations pre-partum and both the peak in non-esterified fatty acids and the nadir in urea concentration occurred earlier after calving. These differences were associated with significantly lower milk production. Leptin concentrations fell at calving and were related to body condition score. Insulin was negatively correlated with yield in MP cows only. In MP cows the relationship between insulin-like growth factor-I and yield switched from negative to positive between weeks +4 and +7. Both beta-hydroxybutyrate and urea were positively related to yield in PP cows. In contrast, in MP cows beta-hydroxybutyrate was negatively correlated with yield and urea was strongly related to body condition score but not yield. These results suggest that there are differences in the control of tissue mobilization between PP and MP cows which may promote nutrient partitioning into growth as well as milk during the first lactation.

3-Hydroxybutyric Acid↗

Genetic aspects of growth of Holstein-Friesian dairy cows from birth to maturity.

In general, genetic selection is applied after first calving to traits that manifest themselves during the animal's productive life, mostly during the early part of productive life. This selection policy has had undesirable correlated responses in other economically important traits, such as health and fertility, and may also have had an effect on the growth of animals both during productive life and before first calving. In this study, we analyzed the growth trajectory of dairy heifers that had been selected for maximum production of combined fat and protein (measured in kg; select line) or for average production (control line) in the United Kingdom. Before first calving, these divergent lines were managed as a single group. Select line heifers grew faster than did control line heifers. They were also heavier at first calving, but by the end of 3 lactations, the lines were not significantly different in live weight. Selection primarily for yield and for other traits has led to heifers that grow faster and reach higher growth rates earlier in life. A genetic analysis of birth, weaning, and calving weights yielded heritability estimates of 0.53 (birth weight), 0.45 (weaning weight), and 0.75 (calving weight). Confidence intervals for the genetic correlations between the traits indicated that these BW traits are not under the same genetic control.

Aging↗

Genetic relationship between first-lactation body energy and later-life udder health in dairy cattle.

Weekly body condition score (BCS) and live weight records were used to calculate energy content (EC) and cumulative effective energy balance (CEEB) for 508 Holstein-Friesian cows in their first lactation. Cows were raised on an experimental farm and had calved between 1991 and 2000. Energy content was an estimate of the actual energy level of a cow at any given stage of lactation, whereas CEEB was associated with the total body energy content as defined by accumulated weekly energy balance changes since the onset of lactation. Genetic evaluations were computed for the 3 body energy traits (BCS, EC, and CEEB) for each week of first lactation. Random regression models were used to assess the association between first-lactation weekly genetic evaluations for body energy and monthly test-day log-transformed SCC, clinical mastitis, and other udder problems in the first 3 lactations. There was a significant effect of at least one body energy trait at any stage of first lactation past wk 3 on SCC in the first 3 lactations. Maximum genetic correlation estimates were -0.18 (+/-0.04) between wk-16 BCS and SCC in the first 2 lactations, -0.18 (+/-0.04) between wk-11 EC and SCC in the first 2 lactations, and -0.17 (+/-0.07) between wk-6 CEEB and SCC in the first 2 lactations. The effect of body energy traits on clinical mastitis was, in general, nonsignificant; nevertheless, moderate genetic correlations were estimated, ranging from -0.05 (+/-0.07) to -0.25 (+/-0.15). The effect of body energy traits on udder problems other than mastitis was negligible in all cases. Results suggest that, amongst the traits studied here, BCS, EC, and CEEB in the first 3 to 4 mo of lactation 1 had the greatest genetic association with SCC and mastitis in first, second, and, to a lesser extent, third lactations.

Animals↗

Impact of nonadditive genetic effects in the estimation of breeding values for fertility and correlated traits.

The effects of inbreeding, heterosis, recombination loss, and percentage Holstein on the estimation of predicted transmitting abilities for fertility traits (calving interval, number of days from calving to first insemination, nonreturn rate, number of inseminations) and correlated traits (milk yield at test nearest d 110 and body condition score) were examined in a mixed population of Holstein and Friesian cattle. An unfavorable effect of percentage Holstein on calving interval was observed, resulting in a 12-d increase for pure Holsteins compared with pure Friesians. Insemination traits were less affected by percentage Holstein, with 3% more animals returning to first service within 56 d and 0.1 more inseminations required for Holstein animals. Heterosis and recombination loss affected some of the traits. Heterosis had a favorable effect on yield, with a 0.35-kg difference between a pure and cross-bred animal for test milk. There was a reduction of 1 d to first insemination between a pure and first-crossbred animal. Inbreeding had a significant and unfavorable effect on all traits. The difference between a noninbred animal and an animal with an inbreeding coefficient of 10% was a 2.8-d increase in calving interval, a 1.7-d increase in days to first insemination, a 1% increased probability to return to estrus at first service, 0.03 more inseminations, a 0.27-unit decrease in body condition, and a 0.54-kg decrease in milk on test nearest d 110. The effect of inbreeding depression was more pronounced at higher levels of inbreeding. The rank correlations between the predicted transmitting abilities for fertility and correlated traits, with and without the additional nonadditive effects in the model, were over 0.99. Steps should be taken to control the rise in inbreeding, or the effects on fertility and correlated traits such as milk production will begin to manifest themselves.

Animals↗

The relationship between fertility, rump angle, and selected type information in Holstein-Friesian cows.

Some dairy cattle breeders believe that dairy cows with high pin bones will have poorer fertility. The aim of this study was to examine this claim by investigating the relationships, both genetic and phenotypic, between fertility, rump angle, and other selected type traits in first-lactation Holstein-Friesians. Results showed an unfavorable genetic correlation (-0.16) between calving interval and rump angle, suggesting that animals with high pin bones would have a longer calving interval. However, no significant genetic or phenotypic correlation between days to first service and nonreturn rate and rump angle was observed. No evidence of a relationship, linear or quadratic, between any fertility trait and rump angle was found. Udder support and mammary system were unfavorably correlated to calving interval (0.25 and 0.14, respectively), suggesting that cows with more functional udders would have a longer calving interval. Legs and feet score was favorably correlated to nonreturn rate, suggesting that animals with good legs and feet would be less likely to return to service.

Animals↗

Modeling daily energy balance of dairy cows in the first three lactations.

Daily energy balance was calculated for 111 Holstein cows in their first 3 lactations, based on combinations of smoothed preadjusted phenotypic records for milk yield, feed intake, live weight, and body condition score. Two energy balance traits were defined: one based on milk yield and feed intake (EB1) and the other on live weight and body condition score change (EB2). Bessel functions (BF), Legendre polynomials (LP), sinusoidal functions (SF), and cubic splines (CS) were used to model energy balance within and across lactations. Models with BF or LP fitted fixed regressions of order 1 to 6 and random regressions of order 1 to 10. Cubic splines were fitted at 5 to 30 equally spaced knot points. In within-lactation analyses with BF and LP models, likelihood ratio tests revealed that the fit improved significantly up to random regression order of 5 for EB1 and 4 for EB2, independently of the fixed regression order. For EB1 analyses with LP, improvement was marginal albeit significant even for higher random regression order. For CS models, optimal number of knot points was 13 and 12 for EB1 and EB2, respectively. Residual variance and comparisons between actual and predicted energy balance showed that LP of minimum order 8 and 5 modeled, respectively, EB1 and EB2 better than the other 3 functions. In across-lactation analyses with BF and LP models, likelihood ratio tests were significant as the random regression order increased, for any order of the fixed regression. For CS models, optimal number of knot points was 14 and 16 for EB1 and EB2, respectively. Residual variance and comparisons between actual and predicted energy balance showed that models fitting CS and high (>8) random order BF or LP provided the best fit to both traits. However, in an across-lactation analysis, even higher order of LP or BF will be required to provide as good a fit as within-lactation analyses.

Animals↗

Genetic profile of total body energy content of Holstein cows in the first three lactations.

Weekly total body energy content (TBEC) was calculated for 444 Holstein cows in their first 3 lactations. These calculations were based on body lipid and protein changes predicted from weekly changes in body condition score and live weight of each cow. In first lactation, cows lost TBEC during the initial 8 wk, regained it by wk 22, and continued to build up their reserves until wk 37. Cows started lactations 2 and 3 with considerable reserves from the dry period that they used during the first 13 wk of lactation. Variance components for TBEC were estimated using random regression analysis allowing for heterogeneous residual variance. The genetic variance increased within each lactation, suggesting that the genetic component becomes more important as lactation progresses. The genetic correlations between very early (wk 1 to 4) and later stages of first lactation were near zero but they increased considerably between later lactation stages. Genetic correlations between TBEC on wk 5 of first lactation and the remainder of this lactation ranged from 0.64 for the more distant weeks to 0.99 for the immediately subsequent weeks. Genetic correlations with TBEC in second lactation were moderately high (0.68 to 0.70) for the early weeks (1 to 8) and decreased gradually to 0.56 for weeks at the end of lactation. For third lactation, these estimates ranged from 0.53 to 0.63. Genetic correlation estimates of TBEC in wk 12 of first lactation with subsequent first-lactation weeks varied from 0.79 to 0.99, whereas they ranged from 0.65 to 0.77 and from 0.57 to 0.68 in second and third lactations, respectively. The genetic correlation between TBEC in later weeks of first lactation and the rest of productive life increased as first lactation progressed, but the improvement diminished. Weekly genetic evaluations for first-lactation TBEC were used to predict second- and third-lactation energy content. The accuracy of these predictions increased with progressing weeks in first lactation, but about three-fourths of the improvement occurred by wk 5. Our results suggest that TBEC calculated after a month from the first calving may give useful information about the future energy content of a cow.

Animals↗

Body trait profiles in Holstein-Friesians modeled using random regression.

Legendre polynomial and cubic spline functions were used in random regression models to model the change in body traits over the course of the first lactation for daughters of 954 sires. Both functions estimated similar genetic variances for d 50 to 250 across lactation for the majority of traits. The heritability of the traits was similar to other studies using univariate models as well as random regression models. There was little difference between the 2 functions in their predictive power for each of the body type traits, as measured by the absolute difference between the predicted and actual type traits and the proportion of the total phenotypic variance explained by the model. Overall, the Legendre polynomial appeared to model these traits slightly better. Plots of the fixed curves and daily sire solutions obtained from the random regression models showed that there were differences in how the traits and sires changed across lactation. The daily sire solutions were then used to predict differences in liveweight of sires' daughters across first lactation and showed that the daughters of some sires grew faster during first lactation than others. The spatial differences in the body traits that are displayed by this study could be an important indicator of the physical and biological changes that cows are undergoing in their first lactation. Information from these sire profiles could be harnessed to indicate production and functional traits later in life.

Analysis of Variance↗

Evaluation of body condition score measured throughout lactation as an indicator of fertility in dairy cattle.

Body condition score (BCS) records of primiparous Holstein cows were analyzed both as a single measure per animal and as repeated measures per sire of cow. The former resulted in a single, average, genetic evaluation for each sire, and the latter resulted in separate genetic evaluations per day of lactation. Repeated measure analysis yielded genetic correlations of less than unity between days of lactation, suggesting that BCS may not be the same trait across lactation. Differences between daily genetic evaluations on d 10 or 30 and subsequent daily evaluations were used to assess BCS change at different stages of lactation. Genetic evaluations for BCS level or change were used to estimate genetic correlations between BCS measures and fertility traits in order to assess the capacity of BCS to predict fertility. Genetic correlation estimates with calving interval and non-return rate were consistently higher for daily BCS than single measure BCS evaluations, but results were not always statistically different. Genetic correlations between BCS change and fertility traits were not significantly different from zero. The product of the accuracy of BCS evaluations with their genetic correlation with the UK fertility index, comprising calving interval and non-return rate, was consistently higher for daily than for single BCS evaluations, by 28 to 53%. This product is associated with the conceptual correlated response in fertility from BCS selection and was highest for early (d 10 to 75) evaluations.

Analysis of Variance↗

Inbreeding trends and application of optimized selection in the UK Holstein population.

Important increases in the rates of inbreeding have recently been observed in dairy cattle populations, and methods have been proposed to address these increases. The aims of this study were to estimate the current level and rates of inbreeding in the UK Holstein population and to investigate the potential of applying optimized selection to manage the rates of inbreeding. Inbreeding coefficients were calculated for the entire UK Holstein population using 1940 as the base year. Rates of inbreeding were obtained for 3 time periods by regressing mean inbreeding coefficients on the year of birth of the animals. The expected average pedigree index and expected inbreeding of offspring using optimized contributions for a given set of selection candidates was compared to the expected pedigree index and inbreeding of offspring for the same set of selection candidates using observed contributions. The rate of inbreeding in the UK Holstein population has increased substantially since 1990 when compared to previous time periods. This increase is most likely due to the large influence of a few related sires on the breed in the mid- to late 1980s. The introduction of the individual animal model in the early 1990s may also have contributed to increased inbreeding. Optimized selection appears to represent a promising selection tool, not only to manage rates of inbreeding, but also to increase genetic gain at the same rate of inbreeding.

Animals↗

Genotype and diet effects on energy balance in the first three lactations of dairy cows.

Dairy cows make strategic use of body energy to support early lactation and replenish this lost energy later in lactation, thereby creating body energy profiles that vary both within lactation and across lactations. The interaction between genotype and diet energy content is interesting from a management viewpoint and from a cow survival viewpoint. In this study, we modeled energy balance over 3 lactations using a multivariate random regression model, for cows from the Langhill Dairy Cattle Research Centre. This herd has been selected for maximum production or to remain at the UK national average for production (control group) and has been fed 2 diets of different energy density (high or low concentrate). Cows in the various groups differed in body condition score and the way they lost and regained body lipid. Cows selected for maximum production on a low-concentrate diet lost the greatest amount of body lipid (0.54 condition score units) after 3 lactations. Cows selected for maximum production lost more than control cows on either diet, indicating that selection mainly for yield has predisposed cows to utilize body energy to support lactation on diets spanning the range used here. Cows selected for maximum production were heavier at first calving than control cows but lost more weight and regained more weight so that at the end of each lactation, cows in the 2 groups did not differ significantly in weight. Cows use body lipid to support lactation over 3 lactations and the profile of that use varies according to genotype and diet.

Animals↗

Genetic evaluations of dairy bulls for daughter energy balance profiles using linear type scores and body condition score analyzed using random regression.

The difference in body lipid between the start and end of lactation represents the body energy lost (or gained) in support of maintaining lactation including the nonproduction components of lactation. This source of energy is ignored in current genetic evaluations for production for dairy sires. The depletion and accretion of body tissue creates a pattern of body energy content over time that is, in part, under genetic control. Using random regression and field data, we modeled changes in body condition score (BCS) and liveweight, predicted from linear type traits, on first parity cows to produce daily breeding values of their sires for energy balance. These curves show that sires differ in the way their daughters lose and regain body energy throughout lactation. For all sires, the overall mean maximum daughter body energy loss was 1499 MJ (SD = 144 MJ) and occurred at d 99 (SD = 12.8 d) of lactation and the mean total daughter body energy loss at d 305 of lactation was 779 MJ (SD = 224 MJ). In this study, the profiles of body energy loss indicate that daughters of most sires lost body energy before d 150 and then recovered body energy, whereas the daughters of a few sires continued to lose body energy through to the end of lactation. Some sires with high merit for production may have daughters with body tissue mobilization profiles associated with poorer health and fertility leading to higher costs. A method of accounting for this cost could be to correct yield for body tissue mobilization. Deducting kilograms of milk from the breeding value for milk for each sire, equivalent in energy content to the body energy lost, resulted in a correlation of 0.98 between the ranking of sires for milk kilograms before and after adjustment. However, some sires changed rank bylarge amounts, the largest being +355 positions. Breeding values for energy balance can be calculated from single observations of BCS and linear type traits on daughters of a sire; data that can routinely be collected in national conformation assessment schemes.

Animals↗

Genetic evaluation of fertility using direct and correlated traits.

Poor fertility has become a major reason for involuntary culling of dairy cows in the United Kingdom. Calving interval (CI) and body condition score (BCS) are recorded, heritable, genetically correlated with each other, and could be used to extend the scope of dairy indices to include fertility traits. The use of U.K. insemination information for the evaluation of fertility has not been examined previously. Fertility and correlated traits were examined using nationally recorded milk (MILK = daily milk yield at test nearest d 110), BSC, and fertility traits (CI and the insemination traits of nonreturn rate after 56 d, NR56; days to first service, DFS; and number of inseminations per conception, INS). Genetic parameters for the traits were estimated simultaneously with a multitrait sire maternal grandsire (MGS) model and a multitrait BLUP sire MGS model was used to predict sire predicted transmitting abilities for each trait. The relationship between the fertility traits and other predicted transmitting abilities calculated in the United Kingdom was then examined. Heritabilities for the fertility traits were CI = 0.033 +/- 0.01, DFS = 0.037 +/- 0.01, NR56 = 0.018 +/- 0.001, and INS = 0.020 +/- 0.001, with a genetic correlation of 0.671 +/- 0.063 between CI and DFS and -0.939 +/- 0.031 between NR56 and INS. There was an unfavorable genetic correlation between the fertility traits and milk yield and BCS. Predicted transmitting abilities produced are similar in size and range to those produced in other studies and genetic trends are as expected. Results to date are encouraging and suggest that the planned program of work will lead to a fertility index that, when used by breeding companies, will lead to improvements in national dairy cow fertility.

Animals↗

Genetic relationships between calving interval and body condition score conditional on milk yield.

Body condition score (BCS) is a useful tool in assessing the energy status of dairy cattle. Previous research has shown that it is heritable and genetically correlated to reproductive performance. Currently, interest exists in developing selection indexes for fertility that include BCS information. Before such indexes are developed, it is important to assess the genetic covariance between BCS and fertility after fully accounting for the covariance of both traits with milk yield, as indices to predict selection responses require knowledge of these (co)variances. In the present study, calving interval (CI) was used as a measure of reproductive performance. The genetic correlations between BCS and CI before and after genetically adjusting for milk yield were -0.48 and -0.22, respectively. Thus, cows with low BCS have longer CI, which is exacerbated by high levels of milk production. Using selection index theory, we showed that selecting for milk yield alone will result in an increase of 768 kg of milk, an increase of 4.46 d in CI and a reduction of 0.41 BCS units for every standard deviation change in the index. Restricting BCS to no genetic change, whereas still selecting for milk yield will result in an increase of 653.1 kg of milk per standard deviation of the selection index. However, CI will still continue to increase at a rate of 3.20 d per standard deviation of the selection index. The selection indices used here are not optimum, in that they are not economically driven and do not consider all traits that contribute to profitability. However, they demonstrate that, even though restricting BCS may be seen as an attractive way of limiting reliance of body tissue mobilization to fuel milk production, this is unlikely to result in improvements in CI, although the rate of increase in CI will be reduced.

Analysis of Variance↗

Energy balance profiles for the first three lactations of dairy cows estimated using random regression.

Daily animal solutions were predicted using random regression analysis for feed intake, milk yield, live weight, and condition score recorded on 189 cows at the Langhill Dairy Cattle Research Centre. All cows had three successive lactations. Energy balance for days 1 to 305 of each of the three lactations was calculated both from daily measures of feed intake and milk output and from weekly measures of live weight and condition score. Cows returned to positive energy balance at days 72, 75, and 95 in lactations 1, 2, and 3, respectively, based on energy balance calculated from feed intake and milk output records (EB1), and at days 77, 83, and 73 based on energy balance calculated from body energy state changes (EB2). Correlations between energy balance at the same time in successive lactations ranged from 0.01 to 0.66 depending on the method of calculation and the stage of lactation. Energy balance over three lactations was modelled using sinusoidal functions which were associated with individual cows and allowed to vary between cows. The parameters of these curves are potentially useful since they have a biological interpretation. The phase relates to the period from calving to return to positive energy balance, and the amplitude relates to the degree of body energy loss (and recovery). The sinusoidal functions fitted to the curve removed a significant proportion of the variation, but accounted for only 45% and 40% of the variation in EB1 and EB2, respectively. The relationship between energy balance in the first three lactations is likely to be more complex than a simple linear function, but the profile of energy balance over the first three lactations may be a useful selection criteria in a multi-trait index. Energy balance profile over lactations one to three can be modelled with moderate accuracy using sinusoidal functions, and this warrants further research.

Animals↗

The relationship between body condition score and reproductive performance.

The aim of this study was to investigate the relationship between measures of body condition score collected from calving until wk 26 of lactation and reproductive measures (calving interval, days to first heat, days to first service, and conception at first service). Since 1973 sires of cows at the Langhill Dairy Cattle Research Centre have been selected for either high (selection line) or average (control line) genetic merit for fat plus protein. The data included 1211 records from 534 cows calving from 1988 to 1999. At first calving, cows were randomly assigned to one of two ad libitum diets: one that was relatively high in concentrates (approximately 3000 kg/yr) and one that was relatively low in concentrates (approximately 1500 kg/yr). Selection line cows were on average thinner and lost more condition in early lactation than control line cows. Cows that lost condition, those that were thinner than average at wk 10 of lactation and those that were thinner on average over the first 10 wk, had poorer reproductive performance. This effect was greatest in the selection line. Line x diet interaction effects were not statistically significant. Genetic correlations between body condition score and reproductive measures were unfavorable and ranged from -0.04 to -0.54. The relationship between body condition score and production was strong, but, even after adjusting for yield, an unfavorable relationship still exists between body condition score and fertility. Body condition score could be used as a management and selection tool to improve reproductive performance.

Animal Husbandry↗

The genetic relationship between calving interval, body condition score and linear type and management traits in registered Holsteins.

The trend to poorer fertility in dairy cattle with rising genetic merit for production over the last decade suggests that breeding goals need to be broadened to include fertility. This requires reliable estimates of genetic (co)variances for fertility and other traits of economic importance. In the United Kingdom at present, reliable information on calving dates and hence calving intervals are available for most dairy cows. Data in this study consisted of 44,672 records from first lactation heifers on condition score, linear type score, and management traits in addition to 19,042 calving interval records. Animal model REML was used to estimate (co)variance components. Genetic correlations of body condition score (BCS) and angularity with calving interval were -0.40 and 0.47, respectively, thus cows that are thinner and more angular have longer calving intervals. Genetic correlations between calving interval and milk, fat, and protein yields were between 0.56 and 0.61. Records of phenotypic calving interval were regressed on sire breeding values for BCS estimated from records taken at different months of lactation and breeding values for BCS change. Genetic correlations inferred from these regressions showed that BCS recorded 1 mo after calving had the largest genetic correlation with calving interval in first lactation cows. It may be possible to combine information on calving interval, BCS, and angularity into an index to predict genetic merit for fertility.

Analysis of Variance↗