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Biomedical subjects

M Ariel

Publications and source records attributed to M Ariel.

At least 19 recordsLinked to original sources
PubMed2004

Quantitative analysis of granule cell axons and climbing fiber afferents in the turtle cerebellar cortex.

The turtle cerebellar cortex is a single flat sheet of gray matter that greatly facilitates quantitative analysis of biotylinated dextran amine labeled granule cell and olivocerebellar axons and Nissl-stained granule and Purkinje neurons. On average, ascending granule cell axons are relatively thicker than their parallel fiber branches (mean +/- SD: 0.84 +/- 0.17 vs 0.64 +/- 0.12 microm, respectively). Numerous en passant swellings, the site of presynaptic contact, were present on both ascending and parallel fiber granule cell axons. The swellings on ascending axons (1.82 +/- 0.34 microm, n = 52) were slightly larger than on parallel fibers (1.43 +/- 0.24 microm, n = 430). In addition, per unit length (100 microm) there were more swellings on ascending axons (11.2 +/- 4.2) than on parallel fibers (9.7 +/- 4.2). Each parallel fiber branch from an ascending axon is approximately 1.5 mm long. Olivocerebellar climbing fiber axons followed the highly tortuous dendrites of Purkinje cells in the inner most 15-20% of the molecular layer. Climbing fibers displayed relatively fewer en passant swellings. The spatial perimeter of climbing fiber arbors (area) increased 72% from anteriorly (1797 microm2) to posteriorly (3090 microm2) and 104% from medially (1690 microm2) to laterally (3450 microm2). Differences in the size and spacing of en passant swellings on granule cell axons suggest that ascending axons may have a functionally more significant impact on the excitability of a limited number of radially overlying Purkinje cells than the single contacts by parallel fiber with multiple orthogonally aligned Purkinje cell dendrites. The spatially restricted distribution of climbing fibers to the inner most molecular layer, the paucity of en passant swellings, and different terminal arbor areas are enigmatic. Nevertheless, these finding provide important anatomical information for future optical imaging and electrophysiological experiments.

Afferent Pathways↗
PubMed2001

Direction tuning of inhibitory inputs to the turtle accessory optic system.

Neurons in turtle accessory optic system (basal optic nucleus, BON) were studied to compare excitatory and inhibitory visual inputs. Using a reduced in vitro brain stem preparation with the eyes attached, previous studies only showed a monosynaptic retinal input to the BON from direction-sensitive retinal ganglion cells that share a common preferred direction. Now using an intact brain stem preparation, not only did BON neurons display inhibitory postsynaptic potentials [IPSP(C)s] spontaneously, but IPSP(C)s were also evoked by visual pattern motion, they had their polarity reversed near the chloride equilibrium potential and they were blocked by the GABA(A) antagonist bicuculline. Because excitatory postsynaptic currents had reversal potentials >0 mV, BON cells were recorded using patch electrodes filled with QX-314 or Cs+ to measure the cell's direction tuning also at that higher reversal potential. For most of the BON neurons studied, their visual excitation and inhibition had a very similar preferred direction, indicating that both synaptic inputs were maximally active onto the same cell under the same stimulus conditions. These competing inputs may result from connections between the pretectum and accessory optic nuclei. Such synaptic interactions may serve a functional role in the visual processing necessary to create retinal slip signals for oculomotor control.

Animals↗
PubMed2001

A PCR-based method for studying DNA methylation.

DNA methylation is a mechanism for regulation of gene expression in animals (1-3). The addition of a methyl group at the 5-position of cytosine bases occurs exclusively at CpG dinucleotides. CpG dinucleotides in the vertebrate genome are underrepresented and amount to 1% of the genome (4). However, in some regions of the genome, CpG residues amount to 6% or more of the dinucleotides in the genome. These regions, known as CpG islands, are usually associated with the promoter regions of housekeeping genes and, in contrast to CpGs throughout the genome, are unmethylated (5,6). Methylation of CpG islands occurs only in silenced genes on the inactive X chromosome and in parentally imprinted genes (7). In addition, CpG islands may become methylated upon oncogenic transformation. These alterations in the methylation profile are correlated with silencing of tumor suppressor genes such as p15, p16, Rb, VHL, e-cadherin, ER, and HIC1 (8).

Animals↗
PubMed2000

Correlation between DNA methylation and murine IFN-gamma and IL-4 expression.

In order to determine the possible role of DNA methylation as a regulatory mechanism for the restricted pattern of lymphokine production among differentiated Th(1)and Th(2)cells, we examined the extent of methylation of the interferon gamma (IFN-gamma) and the interleukin 4 (IL-4) genes in fresh activated murine Th(0), Th(1)and Th(2)cells, unstimulated naive T cells, B cells, bone marrow derived non-B non-T cells, thymocytes and liver. All of the CpG dinucleotides examined in the IL-4 and the IFN-gamma genes, were fully methylated over the body of the gene in all of the examined cells. However, analysis of the promoter regions of these genes revealed a different pattern. While the IL-4 promoter is fully methylated in all of the examined cells, two adjacent CpG dinucleotides near the initiation point of the IFN-gamma gene were unmethylated in all T cells, including 17-day-old fetal thymocytes. In contrast, B cells, bone marrow non-B non-T cells and liver cells displayed a full methylated profile of the IFNgamma promoter. These results suggest that the mutually exclusive pattern of IFNgamma and IL-4 production in Th(1)and Th(2)cells is not regulated by differential demethylation of these two genes.

Animals↗
PubMed1999

Response attenuation during coincident afferent excitatory inputs.

The linearity of the synaptic summation of two unitary excitatory synaptic events was investigated during whole cell recordings from retinal target neurons in an eye-attached isolated brain stem preparation. Pairs of unitary excitatory postsynaptic potentials (EPSPs) were evoked by bipolar stimulation electrodes that were directed to two distinct foci on the retinal surface based on the visual receptive field boundaries. The interval between stimulation of each retinal site was incremented by 0.5-1 ms to quantify the time course of nonlinear summation using an exponential fit. Response facilitation was never observed; however, the coincident arrival of synaptic inputs caused a response attenuation in 26 of the 37 pairs studied. Twelve of the 26 pairs had time constants of their attenuation that were similar to the time constants of the decaying phases of the first EPSPs of each pair. This suggests that the attenuation of these 12 pairs may be entirely due to voltage-dependent mechanisms, such as a reduction in driving force or a change of the activity of voltage-sensitive channels. On the other hand, the 14 other pairs had their time constant of attenuation shorter than the time constants of the decaying phase of the first EPSP. In fact, the attenuation time constants were often closer to the time constants of the decaying phases of the first excitatory postsynaptic currents of each pair. This finding suggests that the attenuation of these 14 pairs involve a shunting mechanism due to the opening of synaptic channels. The presence of this conductance-dependent mechanism is supported by the finding of asymmetric effects on the time course of attenuation when the stimulation sequence was reversed. These results are discussed in terms of the processing by neurons of coincident excitatory inputs onto spatially distinct points of their dendritic trees.

Animals↗
PubMed1998

Morphology of basal optic tract terminals in the turtle, Pseudemys scripta elegans.

The morphologies of axon terminals of retinal ganglion cells projecting to the basal optic nucleus (BON) via the basal optic tract (BOT) were studied in the red-eared turtle. The BOT was visualized on the ventral surface of the brainstem in vitro, and either biotinylated dextran amine was injected extracellularly or neurobiotin was injected into physiologically identified axons during intracellular recordings. Up to 16 hours after tracer injection, the brains were fixed, sectioned parasagittally, and stained for biotin and Nissl substance. The diameters and depths of extracellularly filled axons were measured at three BON sites. Fourteen axons were reconstructed from serial sections with the aid of appropriate computer software. Analysis of extracellularly filled retinal axons revealed that about three times more axons were present just inside the rostral border of the BON compared with its caudal border. Thick (2-4 microm) axons were located within 100 microm from the ventral border, whereas thin (<2 microm) axons were found throughout the nucleus. Only the thinnest axons (<1 microm) extended caudally from the nucleus, indicating that some extracellularly labelled fibers passed through the BON. The intracellularly filled axons were more similar to the thick axons filled extracellularly and arborized entirely within the BON. All of the intracellularly filled axons had thick ventral trunks from which many thin branches extended dorsally and obliquely within the BON. The thin branches bifurcated repeatedly to form bead-like varicosities or boutons that often formed clusters within regions of 150 microm3 or less. These clusters may reflect areas of focused synaptic contact on BON cells with specific direction preferences.

Animals↗
PubMed1998

Direction tuning of individual retinal inputs to the turtle accessory optic system.

Neurons in turtle accessory optic system [basal optic nucleus (BON)] were recorded to study convergence of retinal afferents, using whole-cell patch electrodes in a reduced in vitro brainstem preparation with the eyes attached. BON cells primarily exhibit EPSPs from a contralateral retinal ganglion cell input and generate an output of action potentials. Visual responses were evoked by different directions of either full-field or local moving patterns. Direction tuning of action potentials was compared with that of EPSPs detected by passing the membrane voltage through an AC amplifier and window discriminator. This rough measure of retinal input indicated that the direction tuning of the full-field excitatory input from the retina matched that of the spike output for the same BON cell. Using local patterns within the receptive fields of the BON cells, it was estimated that one to four adjacent retinal inputs were being stimulated. The direction tuning of these inputs had preferred directions that were similar to that of the full-field spike output of the cell, irrespective of where the small window was placed within the receptive field. Because more than one retinal input may have been stimulated by the small stimulus window, subsets of those EPSPs that may represent responses of a single retinal afferent were identified based on their amplitude and rise time. Again, the preferred direction of those putative single retinal afferents matched the direction tuning of the spike output of the BON cell. These findings are discussed in terms of the formation of the retinal slip signal by the BON.

Action Potentials↗
PubMed1998

Analysis of direction-tuning curves of neurons in the turtle's accessory optic system.

Visual-movement sensitivity of neurons in the turtle's accessory optic system was investigated. Neuronal responses to stimulus direction and speed were analyzed to determine whether they reflect processing by a one-dimensional encoder of visual motion or whether they indicate directional integration of presynaptic direction-sensitive responses whose maximal-response directions are distributed. Both of these mechanisms make predictions about the functional relationship between stimulus direction and response. The responses of single units in the basal optic nucleus to visual stimulation in different directions were described by both cosine and wrapped normal fitting functions. The wrapped normal function (a Gaussian curve mapped onto a circle) performed at least as well as the cosine function and described directional tuning curves of varying widths. Unlike cosines, the addition of two wrapped normals could describe multi-lobed directional data. Next, it was demonstrated that these neurons did not encode visual motion projected onto a single, spatial axis. Responses to the projected speed along the maximal-response direction were systematically lower than responses to the actual speed along that direction. Thus, for speeds above 1 degrees/s, neuronal response varies with respect to direction but not speed. Summation of presynaptic direction-sensitive responses with distributed maximal-response directions (referred to as directional integration) is discussed as a means of accounting for these results.

Animals↗
PubMed1997

Open loop optokinetic responses of the turtle.

Turtle eye movements were measured during full-field horizontal optokinetic stimulation under closed and open loop conditions. Because these animals display unyoked slow-phase eye movement behavior, open loop stimulation could not be presented to a paralyzed eye, while monitoring the position of the contralateral eye. The turtle's optokinetic reflex loop was opened electronically by a continuous adjustment of the pattern's position that effectively canceled the effect of the movement of the recorded eye. The highest open loop gains (2-3) were observed at low speeds (< 1 deg/sec), demonstrating a more limited speed range and lower gain in turtle than in the mammalian optokinetic system. These results in the intact animal can be correlated with the visual response properties of the turtle's pretectum and accessory optic system recorded in vitro.

Animals↗
PubMed1997

Membrane properties and monosynaptic retinal excitation of neurons in the turtle accessory optic system.

Using an eye-attached isolated brain stem preparation of a turtle, Pseudemys scripta elegans, in conjunction with whole cell patch techniques, we recorded intracellular activity of accessory optic system neurons in the basal optic nucleus (BON). This technique offered long-lasting stable recordings of individual synaptic events. In the reduced preparation (most of the dorsal structures were removed), large spontaneous excitatory synaptic inputs [excitatory postsynaptic potentials (EPSPs)] were frequently recorded. Spontaneous inhibitory postsynaptic potentials were rarely observed except in few cases. Most EPSPs disappeared after injection of lidocaine into the retina. A few EPSPs of small size remained, suggesting that these EPSPs either were from intracranial sources or may have been miniature spontaneous synaptic potentials from retinal ganglion cell axon terminals. Population EPSPs were synchronously evoked by electrical stimulation of the contralateral optic nerve. Their constant onset latency and their ability to follow short-interval paired stimulation indicated that much of the population EPSP's response was monosynaptic. Visually evoked BON spikes and EPSP inputs to BON showed direction sensitivity when a moving pattern was projected onto the entire contralateral retina. With the use of smaller moving patterns, the receptive field of an individual BON cell was identified. A small spot of light, projected within the receptive field, guided the placement of a bipolar stimulation electrode to activate retinal ganglion cells that provided input to that BON cell. EPSPs evoked by this retinal microstimulation showed features of unitary EPSPs. Those EPSPs had distinct low current thresholds. Recruitment of other inputs was only evident when the stimulation level was increased substantially above threshold. The average size of evoked unitary EPSPs was 7.8 mV, confirming the large size of synaptic inputs of this system relative to nonsynaptic noise. EPSP shape was plotted (rise time vs. amplitude), with the use of either evoked unitary EPSPs or spontaneous EPSPs. Unlike samples of spontaneous EPSPs, data from many unitary EPSPs formed distinct clusters in these scatterplots, indicating that these EPSPs had a unique shape among the whole population of EPSPs. In most BON cells studied, hyperpolarization-activated channels caused a slow depolarization sag that reached a plateau within 0.5-1 s. This property suggests that BON cells may be more complicated than a simple site for convergence of direction-sensitive retinal ganglion cells to form a central retinal slip signal for control of oculomotor reflexes.

Animals↗
PubMed1997

Neuronal responses to turtle head rotation in vitro.

Extracellular recordings were made during vestibular stimulation from an in vitro turtle brain stem in which the temporal bones remained attached. Under visual control, microelectrodes were slowly advanced into the vestibular nucleus (VN) while we rotated the brain and searched for a single isolated unit whose spike activity was modulated by the lateral semicircular canals. In some experiments, responses were shown to be due to stimulation of the lateral canals, either by positioning the brains in forward or backward pitch during horizontal rotation or by plugging the vertical canals with wax. VN neurons usually had low spontaneous activity and rectified sinusoidal responses to sinusoidal stimulation. Spike response histograms were averaged from many stimulus cycles and were then fit to a sine function. The fitted phase and amplitude parameters were plotted relative to stimulus frequency and amplitude. The sample of VN cells were quite heterogeneous. Using stimuli at 1 Hz, however, each cell's response phase was weakly correlated with the slope of the plots of response amplitude versus frequency so that a cell could be categorized as sensitive to velocity or acceleration and as sensitive to ipsiversive or contraversive rotation, depending on whether its phase was near -180 degrees, -90 degrees, 0 degrees, or 90 degrees, and whether the gain exceeded 0.4 spikes/s per degrees/s. The properties of these VN cells suggest that there is substantial complexity in the vestibular responses at this first site of central vestibular processing. These data are compared to that of other species where such vestibular signals play an important role in oculomotor and spinal reflexes.

Action Potentials↗
PubMed1995

Gamete-specific methylation correlates with imprinting of the murine Xist gene.

We have investigated the potential role of DNA methylation as a regulator of imprinted Xist expression in mouse preimplantation embryos. The active paternal allele was found to be unmodified in sperm at CpG loci near the 5' end of the gene transcription unit. In contrast, on the inactive maternal allele, these same sites are initially methylated in the oocyte and then remain modified in the early embryo. In the male germ line, these methyl moieties are removed during spermatogenesis, and this occurs before the programmed reactivation of Xist in the testis. This represents a clear-cut example of a potential methylation imprinting signal that is reprogrammable and gamete derived.

Alleles↗
PubMed1995

Visual responses and connectivity in the turtle pretectum.

1. Using an isolated turtle brain preparation, we made extracellular spike recordings in the dorsal midbrain during visual stimulation. Single units were isolated by their response to a slow-moving full-field visual pattern imaged on the contralateral retina. This stimulus elicits responses from the basal optic nucleus (BON) and the cerebellar cortex using a similar preparation. Direction and speed tuning were then analyzed, as well as the size and position of the receptive field. 2. In one brain stem region, anterior to the optic tectum and deep to the dorsal surface, all of the visually responsive neurons were direction sensitive (DS) to contralateral retinal stimulation. The location and properties of these cells indicate that they are in the mesencephalic lentiform nucleus (nLM). Anterograde transport of intravitreally injected horseradish peroxidase revealed that this pretectal nucleus receives direct input from the contralateral eye. 3. All but 2 of the 48 cells of the nLM were strongly DS. The most effective stimulus was a slowly moving complex visual pattern that drifted nasally in the contralateral visual field. Brief flashes of spots, patterns, or diffuse light were much less effective. Receptive fields were large and usually (9 of 13 cells) centered in the superior visual field near the horizon and nasal to the blind spot. 4. The visual responses of nLM cells were compared to those of cells in the superficial layers of the optic tectum. In contrast to nLM, the responses of tectal cells were heterogeneous and frequently not DS. Neither tectum or nLM cells had much spontaneous spike activity during darkness or stationary patterns. On the other hand, visual responses of nLM cells were very similar to those of the BON, where neurons also had low spontaneous activity, preferred slow-moving patterns, and were DS. However, nLM and BON exhibit different distributions of preferred directions. Most nLM cells preferred temporal-to-nasal motion, whereas BON cells preferred almost any direction, although few preferred the nasal direction. nLM cell responses were not affected by removal of the ventral brain stem including the BON. 5. The visual properties of nLM cells recorded in vitro were very similar to those that were recorded in intact turtles.(ABSTRACT TRUNCATED AT 400 WORDS)

Animals↗
PubMed1994

Developmental changes in methylation of spermatogenesis-specific genes include reprogramming in the epididymis.

We have determined the status of DNA methylation at specific sites in three spermatogenesis-specific genes, Pgk-2, ApoA1 and Oct-3/4, throughout the development and differentiation of male germ cells in the mouse. We observed a specific demethylation event in the Pgk-2 gene in prospermatogonia at about the time of birth, about 10 days before the onset of transcription which first occurs in primary spermatocytes. All three genes were unmethylated in adult spermatogenic cells in the testis, but were remethylated in mature spermatozoa in the vas deferens. Surprisingly, we found that this remethylation is part of the process of sperm maturation which occurs in the epididymis.

5-Methylcytosine↗
PubMed1993

Dynamics of DNA methylation during development.

DNA methylation plays a role in the repression of gene expression in animal cells. In the mouse preimplantation embryo, most genes are unmethylated but a wave of de novo methylation prior to gastrulation generates a bimodal pattern characterized by unmethylated CpG island-containing housekeeping genes and fully modified tissue-specific genes. Demethylation of individual genes then takes place during cell type specific differentiation, and this demodification may be a required step in the process of transcriptional activation. DNA modification is also involved in the maintenance of gene repression on the inactive X chromosome in female somatic cells and the marking of parental alleles at genomically imprinted gene loci.

Animals↗
PubMed1993

The ontogeny of allele-specific methylation associated with imprinted genes in the mouse.

We have investigated the DNA methylation patterns in genomically imprinted genes of the mouse. Both Igf2 and H19 are associated with clear-cut regions of allele-specific paternal modification in late embryonic and adult tissues. By using a sensitive PCR assay, it was possible to follow the methylation state of individual HpaII sites in these genes through gametogenesis and embryogenesis. Most of these CpG moieties are not differentially modified in the mature gametes and also become totally demethylated in the early embryo in a manner similar to non-imprinted endogenous genes. Thus, the overall allele-specific methylation pattern at these sites must be established later during embryogenesis after the blastula stage. In contrast, sites in an Igf2r gene intron and one CpG residue in the Igf2 upstream region have allele-specific modification patterns which are established either in the gametes or shortly after fertilization and are preserved throughout pre-implantation embryogenesis. These studies suggest that only a few DNA modifications at selective positions in imprinted genes may be candidates for playing a role in the maintenance of parental identity during development.

Alleles↗
PubMed1993

A low-cost VGA-based visual stimulus generation and control system.

A flexible visual stimulus system has been developed for neuroscience research that uses low-cost and widely available personal computer hardware. The system has many advantages over those that rely upon traditional optical and mechanical methods, including size, flexibility and spatiotemporal resolution. The system is designed around an IBM-compatible personal computer, equipped with a VGA graphics card and a VGA monitor or projector. A set of assembly language routines has been developed for the setup and control of the graphics hardware so that images are generated and then moved with single pixel/single frame resolution. Two variations of this system are described. One version enables a stimulus on the display monitor to be imaged directly on the retina in vitro during spike recordings; the other variant back-projects an image onto a tangential screen for in vivo testing in the awake animal. Using the latter approach, the image can be positioned on the retina as the eye continues to move.

Computer Graphics↗