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Biomedical subjects

Luca Ferrarini

Publications and source records attributed to Luca Ferrarini.

3 recordsLinked to original sources

Shape differences of the brain ventricles in Alzheimer's disease.

The brain ventricles are surrounded by gray and white matter structures that are often affected in dementia in general and Alzheimer's disease (AD) in particular. Any change of volume or shape occurring in these structures must affect the volume and shape of the ventricles. It is well known that ventricular volume is significantly higher in AD patients compared to age-matched healthy subjects. However, the large overlap between the two volume distributions makes the measurement unsuitable as a biomarker of the disease. The purpose of this work was to assess whether local shape differences of the ventricles can be detected when comparing AD patients and controls. In this work, we captured the ventricle's shape and shape variations of 29 AD subjects and 25 age-matched controls, using a fully automatic shape modeling technique. By applying permutation tests on every single node of a mesh representation of the shapes, we identified local areas with significant differences. About 22% of an average surface of the ventricles presented significant difference (P < 0.05) ( approximately 14% of the left against approximately 7% of the right side). We found out that in patients with Alzheimer disease, not only the lateral horns were significantly affected, but also the areas adjacent to the anterior corpus callosum, the splenium of the corpus callosum, the amygdala, the thalamus, the tale of the caudate nuclei (especially the left one), and the head of the left caudate nucleus.

Aged↗

Fully automatic shape modelling using growing cell.

In this paper, we present a new framework for shape modelling and analysis: we suggest to look at the problem from a pattern recognition point of view, and claim that under this prospective several advantages are achieved. The modelling of a surface with a point distribution model is seen as an unsupervised clustering problem, and tackled by using growing cell structures. The adaptation of a model to new shapes is studied as a classification task, and provides a straightforward solution to the point correspondence problem in active shape modelling. The method is illustrated and tested in 3D synthetic datasets and applied to the modelling of brain ventricles in an elderly population.

Cerebral Ventricles↗

A more efficient search strategy for aging genes based on connectivity.

MOTIVATION: Many aging genes have been found from unbiased screens in model organisms. Genetic interventions promoting longevity are usually quantitative, while in many other biological fields (e.g. development) null mutations alone have been very informative. Therefore, in the case of aging the task is larger and the need for a more efficient genetic search strategy is especially strong. RESULTS: The topology of genetic and metabolic networks is organized according to a scale-free distribution, in which hubs with large numbers of links are present. We have developed a computational model of aging genes as the hubs of biological networks. The computational model shows that, after generalized damage, the function of a network with scale-free topology can be significantly restored by a limited intervention on the hubs. Analyses of data on aging genes and biological networks support the applicability of the model to biological aging. The model also might explain several of the properties of aging genes, including the high degree of conservation across different species. The model suggests that aging genes tend to have a higher number of connections and therefore supports a strategy, based on connectivity, for prioritizing what might otherwise be a random search for aging genes.

Aging↗