[Establishment of A + G ligation mediated polymerase chain reaction and its application in in vivo footprinting study].
OBJECTIVE: To establish a new ligation mediated PCR method for the work in in vivo footprinting study of some regions of low G-residue content or some regions of G-residue free. METHODS: The A > G chemical cleavage method of Maxam-Gilbert sequencing was modified for ligation mediated PCR after A + G chemical cleavage and separate the PCR products by sequencing PAGE. RESULTS: A new A + G ligation mediated method was established and could be used in vivo footprinting study. CONCLUSIONS: Our results indicated that the newly developed method could analyze the DNA-Protein interaction at both A-residue and G-residue, enabled us to get more information and enlarged the scope of its application.