Search PubMed⌕ Search

Biomedical subjects

L D Hall

Publications and source records attributed to L D Hall.

At least 55 records · Page 3Linked to original sources

Quantitative magnetic resonance imaging of fresh and frozen-thawed trout.

Magnetic resonance imaging (MRI) has been used to visualise the major organs and muscular-skeletal frame-work of fresh rainbow trout (Salmo gairdneri) in two dimensions, and to identify the spatial distribution of lipid- and collagen-rich tissues. Quantitative MRI provides the MR parameters (T1, T2, M0, T1sat, Msat/M0, and the Magnetisation Transfer (MT) rate) for the tissue water; variations in those parameters enable distinction to be made between a freshly killed trout and one which has been frozen-thawed. The effects of freezing method, repeat freeze-thawing, and storage time on the MR parameters are discussed.

Animals↗

Design of biplanar gradient coils for magnetic resonance imaging of the human torso and limbs.

A method is described for design of gradient coils of unconventional geometry for MRI that is based on the superpositions of magnetic fields arising from individual current elements calculated by the Biot-Savart Law. Use of an optimization method based on a genetic algorithm enables a wide diversity in the shapes of coil that can be modeled. To exemplify this a two axis, biplanar gradient set is presented; this geometry offers good access for rectangular objects whilst holding the coils closer to the region of interest than is possible for cylindrical configurations. The inner dimensions of the gradient set were 40.0 x 24.4 x 40.0 cm and the gradient efficiencies were 0.3 and 0.4 mT m(-1) A(-1) in the z- and y- directions respectively over a 15 cm diameter region. Correction of signals arising from regions for which gradient linearity was not optimized was successful for the monotonic region within the set; the largest cuboid from which the MR signal could be processed to produce an undistorted image is of dimensions 36.3 x 17.2 x 24.4 cm.

Algorithms↗

The reduction of the sorting bias in the eigenvalues of the diffusion tensor.

One of the most intrinsic quantities when measuring the diffusion properties of a system is the set of principal diffusivities, which represents diffusion along the fibre axes. System noise is a well-known cause of systematic sorting bias when closely spaced diffusivities are ordered according to their magnitude and leads to their inaccurate estimation. This paper describes a new method for the ordering of the principal diffusivities in which local fibre directional coherence was used as a basis for sorting. The method was applied and tested in computer simulations and experimental data acquired in an isotropic water phantom and healthy human brain. Our results demonstrate that this method leads to significant reduction in the sorting bias in comparison to other techniques and thus a more accurate estimation of the eigenvalues. The method is advantageous over other proposed alternatives to the conventional magnitude sorting method because it is not reliant on a large region-of-interest averaging scheme.

Anisotropy↗

A study of rotationally invariant and symmetric indices of diffusion anisotropy.

This study investigated the properties of a class of rotationally invariant and symmetric (relative to the principal diffusivities) indices of the anisotropy of water self-diffusion, namely fractional anisotropy (FA), relative anisotropy (RA), and volume ratio (VR), with particular emphasis to their measurement in brain tissues. A simplified theoretical analysis predicted significant differences in the sensitivities of the anisotropy indices (AI) over the distribution of the principal diffusivities. Computer simulations were used to investigate the effects on AI image quality of three magnetic resonance (MR) diffusion tensor imaging (DTI) acquisition schemes, one being novel: the schemes were simulated on cerebral model fibres varying in shape and spatial orientation. The theoretical predictions and the results of the simulations were corroborated by experimentally determined spatial maps of the AI in a normal feline brain in vivo. We found that FA mapped diffusion anisotropy with the greatest detail and SNR whereas VR provided the strongest contrast between low- and high-anisotropy areas at the expense of increased noise contamination and decreased resolution in anisotropic regions. RA proved intermediate in quality. By sampling the space of the effective diffusion ellipsoid more densely and uniformly and requiring the same total imaging time as the published schemes, the novel DTI scheme achieved greater rotational invariance than the published schemes, with improved noise characteristics, resulting in improved image quality of the AI examined. Our findings suggest that significant improvements in diffusion anisotropy mapping are possible and provide criteria for the selection of the most appropriate AI for a particular application.

Animals↗

A magnetic resonance-compatible experimental set-up for hyperthermia studies.

This study presents the development and testing of an experimental set-up for simultaneous measurements of pH (intracellular by MR and extracellular by fibre-optic pH meter), tumour bio-energetics (by MR), and core/tumour temperatures (by thermocouples) in tumour-bearing mice. Potential sources of measurement errors when using these techniques concurrently in an MR set-up are discussed. Emphasis is placed on simple practical solutions to these problems.

Animals↗

Geometrical models of left ventricular contraction from MRI of the normal and spontaneously hypertensive rat heart.

This study develops a quantitative analysis and model for the differences in left ventricular dynamics in normal and spontaneously hypertensive rats, as determined using non-invasive magnetic resonance imaging (MRI). We emerge with a characterization of the geometrical changes in the left ventricle resulting from hypertension. In addition, the techniques we have adopted are potentially applicable to the study of other disease models for important human cardiac pathologies. A gradient-echo multislice imaging sequence (echo time 4.3 ms) achieved complete image coverage of the heart at high time resolution (13 ms) through the cardiac cycle. Cardiac anatomy in two age-matched groups of young adult (8 and 12 weeks old) normal Wistar-Kyoto (WKY, n = 8) and spontaneously hypertensive rats (SHR, n = 8) was imaged in synchrony with the electrocardiographic R wave in defined planes both parallel and perpendicular to the principal cardiac axis. The transverse left ventricular image sections were circularly symmetrical; this permitted application of different analytical models for the three-dimensional geometry of the epi- and endocardial borders. An ellipsoidal figure of revolution offered an effective description of the three-dimensional left ventricular geometry throughout the cardiac cycle in both normal WKY and SHR animals. The model successfully characterized both the dynamic changes in the shape of the left ventricle through the cardiac cycle and the pathological alterations resulting from spontaneous hypertension. The elliptical model also formed the basis of a simple stress distribution analysis. Such parametric descriptions thus provided a useful alternative to more complex finite element analyses of cardiac function. The eccentricity of the ventricle was characterized by an ellipticity factor a, where a = 1 for a sphere and a < 1 for a prolate ellipsoid. At end systole, the endocardial surface of the left ventricle gave a = 0.43+/-0.02 and 0.49+/-0.02 for the WKY and SHR animals respectively (probability, P < 0.05). At end diastole, the endocardial surface of the left ventricle gave a = 0.58+/-0.02 and 0.63+/-0.02 for the WKY and SHR animals respectively (P < 0.05). Such a difference in ventricular shape was a potential adaptation to increased blood pressure. Hypertension thus altered the left ventricular ellipticity to give a more spherical geometry compared with the normal rats.

Animals↗

Magnetic resonance imaging analysis of left ventricular function in normal and spontaneously hypertensive rats.

1. We have used magnetic resonance imaging (MRI) to examine acute morphological changes in the left ventricle throughout the cardiac cycle in normal Wistar Kyoto rats (WKY) and also to follow the development of chronic changes in spontaneously hypertensive rats (SHR). This involved the development of MRI and quantitative analysis techniques for characterizing contractile changes during the cardiac cycle. 2. Images of the cardiac anatomy in two age groups (8 and 12 weeks old) of young anaesthetized adult normal WKY and SHR were acquired in planes both parallel and perpendicular to the principal cardiac axis. 3. Complete coverage of the heart by imaging planes was achieved with high time resolution (13 ms), with typically 12 time frames in the cardiac cycle, using a short echo time (5 ms) multislice gradient-echo imaging sequence. Imaging was synchronized to the R wave of the electrocardiogram. 4. The image slices could be reconstructed into complete geometrically and temporally coherent three-dimensional data sets. Left ventricular (LV) volumes were thus reconstructed throughout the cardiac cycle by combining transverse cardiac image sections. This volume analysis revealed structural and functional differences between the normal WKY and SHR in both age groups of 8 and 12 weeks. Measurements from the cardiac images were additionally validated against histological measurements. 5. The SHR showed a raised LV end-systolic volume and a correspondingly poorer ejection fraction as well as LV hypertrophy when compared with the controls. Left ventricular function in the SHR appeared stable between the two age groups. 6. We developed a simple geometrical model of the left ventricle based on a single longitudinal image section and successfully used this to describe some functional parameters of the left ventricle in the WKY and SHR. This geometrical model has the potential to greatly reduce the imaging time needed to study the beating heart in future serial investigations of cardiac physiology in rats. 7. Our experimental and analytical methods together form a powerful set of quantitative techniques which combine both imaging and functional analysis and will be applicable for future studies of chronic physiological changes in animal disease models.

Animals↗

Rapid MRI and velocimetry of cylindrical Couette flow.

A narrow-gap, temperature-controlled Couette flow rheometer has been developed to study fluid velocities within the annular gap between two concentric cylinders by nuclear magnetic resonance (NMR) imaging and velocimetry. Alternative pulsed-field-gradient-based nuclear magnetic resonance imaging strategies which may be used for measurement of velocity within the Couette flow device have been evaluated. These include two-dimensional (2-D) imaging techniques with acquisition times of several minutes and a one-dimensional (1-D) projection method which exploits the symmetry of the device to reduce overall measurement time to less than 1 min. Velocity measurements made using each technique are presented for a Newtonian fluid undergoing Couette flow at shear rates of approximately 20 and 60 s(-1).

Blood Flow Velocity↗

Measurement of localized cartilage volume and thickness of human knee joints by computer analysis of three-dimensional magnetic resonance images.

RATIONALE AND OBJECTIVES: This work demonstrates a new method for computerized measurement of the dimensions (thickness and volume) of articular cartilage for any specified region of the human knee joint. Three-dimensional magnetic resonance (MR) images optimized for cartilage contrast have been analyzed using computerized edge-detection techniques, and the reproducibility of articular cartilage thickness and volume measurements is assessed. METHODS: A fat-suppressed, three-dimensional SPoiled GRass MR sequence (45/7.5/30 degrees) with total scan time of approximately 12 minutes was used to acquire volume images of human knee joints at spatial resolution of 0.6 x 1.2 x 1.2 mm. Measurements were made using six repeated scans for three healthy volunteers over a period of 2 months. The subsequent semi-automated image processing to establish total cartilage volume and cartilage thickness maps for the femur required approximately 60 minutes of operator time. RESULTS: The mean coefficient of variation for total cartilage volume for the six repeated scans for the three volunteers was 3.8%, and the average coefficient of variation for the user-selected cartilage plugs was 2.0%. The cartilage thickness maps from the repeated scans of the same knee were similar. CONCLUSIONS: Standard resolution MR images with fat-suppressed contrast lead to an objective and reproducible measurement of spatial dimensions of articular cartilage when analyzed semi-automatically using computerized edge-detection methods.

Adult↗

Diastereoselective resolution of 6-substituted glycosides via enzymatic hydrolysis.

The diastereoselectivity of the enzymatic hydrolyses of 4-nitrophenyl 6-deoxy-6-methyl-(R)- and (S)-sulfinyl-beta-D-galactopyranoside (1a,b), 4-nitrophenyl 7-deoxy-D- and L-glycero-beta-D-galacto-heptopyranoside (2a,b) and 4-nitrophenyl 6,7-anhydro-D- and L-glycero-beta-D-galacto-heptopyranoside (3a,b) was investigated using a range of crude glycosidase preparations. It was shown that the enzymes display a high degree of discrimination between diastereomers thereby demonstrating the utility of glycosidases for the diastereomeric resolution of unnatural 6-substituted monosaccharide derivatives.

Chromatography, High Pressure Liquid↗

Design of a biplanar gradient coil using a genetic algorithm.

A biplanar z-gradient coil has been designed using a genetic algorithm, and its efficiency for producing a gradient along the axis of a solenoid magnet compared to that of a conventional Maxwell coil set. Coils of 21.8 cm by 20.9 cm area and 10 cm separation give 0.37 m Tm-1 A-1 with standard and maximum deviations of 2.6 and 13.1% of this value over an optimised cuboid region of 12 by 15 by 1.8 cm. The experimentally useable linear volume extends beyond this to 50% of the separation between the planes. Design data are also given for a transverse gradient set.

Algorithms↗

A general method for measurement of the time integral of variant magnetic field gradients: application to 2D spiral imaging.

A new method is proposed by which the time integral of time-varying magnetic fields in different voxels can be determined by MRI. A further processing step is employed which enables the integral of the magnetic field gradients experienced by groups of voxels to be deduced. Analysis of the theoretical background and complete simulations have been used to assess the limitations of the technique and the method is applied to the measurement of a 2D spiral k-space trajectory and also of its 1D components. These measured trajectories have been used to reconstruct images from experimental spiral-scan raw data of a phantom acquired using the 2D spiral k-space trajectory. Comparisons of the resulting images are made with the image reconstructed using the corresponding theoretical trajectory. The importance of the repeatability, reliability and accuracy of the technique is demonstrated.

Electromagnetic Fields↗

The effects of anesthesia and physical restraint on intra- and extracellular tumor pH, tumor temperature and bioenergetics in murine RIF-1 tumors.

The effects of pentobarbital anesthetic and physical restraint have been evaluated in murine RIF-1 tumors in terms of their suitability in providing minimal temporal variations in core and tumor temperatures, intracellular (pHMR) and extracellular (pHF) tumor pH, and tumor bioenergetics. pHF was measured using a fibreoptic pH probe. The implications of the changes in these parameters on the combined studies of in vivo MRS and hyperthermia have been discussed. The temporal variations of core and tumor temperatures, pHF and pHMR between the anesthetised and restrained mice were statistically significant (p < 0.0001, p < 0.005, and p < 0.0001, respectively). Differences in the temperatures between the two groups varied with time, and were maximum at about 2 h after pentobarbital. In the anesthetised mice, while there was a net increase of 0.28 pH units in pHF, there was a drop by 0.32 pH units in pHMR (p < 0.001). Temporal variations of both pHF and pHMR in the restrained mice were relatively constant. In light of these findings, wherever possible, physical restraint in a suitably designed holder is suggested for immobilizing animals for magnetic resonance spectroscopy studies.

Adjuvants, Anesthesia↗

Optimised diffusion-weighting for measurement of apparent diffusion coefficient (ADC) in human brain.

This work studies the effect of diffusion-weighting on the precision of measurements of the apparent diffusion coefficient (ADC, or D) by diffusion-weighted magnetic resonance imaging. The precision in the value of the ADC was described in terms of a diffusion-to-noise ratio (DNR) which was calculated as the signal-to-noise ratio in the resultant ADC. A theoretical analysis decomposed the DNR into the signal-to-noise ratio in the diffusion-weighted image and the sensitivity of diffusion-weighting, "KD". The latter reflects the effect of the sampling strategy in the diffusion-weighting domain on the DNR. The theoretical analysis demonstrated that optimal two-point diffusion-weighting could be achieved in the vicinity of zeta = D(b2-b1) = 1.1, where zeta is a non-dimensional parameter of diffusion-weighting, and b1 and b2 are the diffusion-weighting factors for the two-point diffusion-weighting. This approach also derived an optimised signal averaging scheme. The limitations and restrictions of the two-point scheme for in vivo ADC measurement were also considered; these included a detailed discussion on partial volume effects. The theory was verified by experiments on phantoms and on the brain of a healthy volunteer using a diffusion-weighted echo-planar imaging protocol. This led to an optimal two-point diffusion-weighting for ADC measurement in human brain using b1 = 300, and b2 = 1550 +/- 100 s/mm2. Such a two-point scheme successfully measured values of the ADC in gray matter, white matter and cerebrospinal fluid in human brain. It thus offers an alternative to the commonly used multiple-point schemes and has the advantage of requiring significantly shorter imaging times.

Adult↗

An algorithm for numerical calculation of the k-space data-weighting for polarly sampled trajectories: application to spiral imaging.

Image reconstruction of data sampled into a non-uniform k-space grid requires appropriate data weighting and, for spiral-scan raw data, this weighting is usually calculated analytically under the assumption of uniform radial k-space sampling. This paper presents a simple and efficient algorithm for explicit numerical calculation of the data weighting for generalised polarly sampled k-space trajectories. The algorithm has been tested against both simulated data and data from experimental spiral-scan imaging and clearly provides significant improvements in image reconstruction when the radial uniformity of the k-space trajectory is poor.

Algorithms↗

MR protocols for imaging the guinea pig knee.

Magnetic resonance images of the femorotibial joints of male Dunkin-Hartley guinea pigs were obtained in two and three dimensions at 2.35 T using a wide range of T1- and T2-weighted imaging sequences. The effect of slice position on visualisation of articular cartilage, bone and periarticular tissues in sagittal and coronal sections was investigated along with the resolution and signal/noise ratio achievable. Based on that survey, a two-dimensional spin echo sequence (repetition time = 1500 ms, echo time = 40 ms) was found to give optimum visualisation of the normal joint anatomy with in-plane resolution of 75 x 150 microns and a 1 mm slice thickness in an imaging time of 25 min. This protocol was also found to be highly effective in distinguishing many features of the spontaneous, osteoarthritic-like pathology found in the joints of older animals compared to juveniles and therefore provides a means of monitoring disease progression longitudinally. Three-dimensional spin echo imaging methods demonstrated focal changes in signal intensity in the articular cartilage of the medial tibial plateau in older animals. The resulting imaging times of several hours, however, precludes their routine use in vivo.

Algorithms↗

A quantitative description of dynamic left ventricular geometry in anaesthetized rats using magnetic resonance imaging.

We report a functional application of magnetic resonance imaging (MRI) for the quantitative description of left ventricular geometry through systole and diastole in normal anaesthetized Wistar rats that might be applicable for the analysis of chronic changes resulting from pathological conditions. Images of cardiac anatomy were acquired through planes both parallel and perpendicular to the principal cardiac axis at times that were synchronized to the R wave of the electrocardiogram. The images of the transverse sections were assembled into three-dimensional representations of left ventricular geometry at consecutive time points through the cardiac cycle. This confirmed the geometrical coherence of the data sets, that each slice showed circular symmetry, and that the images were correctly aligned with the appropriate anatomical axes. Different models for the three-dimensional geometry of the left ventricle were then tested against the epi- and endocardial surfaces reconstructed from images of the transverse sections of the left ventricle in both systole and diastole using least-squares minimizations in three dimensions. In agreement with previous reports in the human heart, an elliptical figure of revolution offered an optimal fit to the epicardial and endocardial geometry for the rat heart in diastole. This was in preference to models that used spherical, quartic or parabolic geometries. However, in contrast to contraction in the human heart, all these geometrical representations broke down during systolic ejection in the rat heart. We therefore introduced a more general hybrid model which described left ventricular geometry in terms of the variation of the radii r(z), independently determined for each slice, with its position z along the principal cardiac axis. The resulting function r(z) could then be described by a simple ellipsoid of revolution not only during diastole, but also throughout ventricular ejection. The findings also ruled out alternative geometrical representations. It was then possible additionally to reconstruct the luminal and total left ventricular volumes, wall thicknesses and ejection fractions through the cardiac cycle and to confirm that the predicted total ventricular wall volume was conserved throughout the cardiac cycle. Our hybrid model of cardiac geometry may thus be useful for non-invasive serial studies of chronic pathological changes that use the rat as a model experimental system.

Animals↗