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Biomedical subjects

K H Chon

Publications and source records attributed to K H Chon.

16 recordsLinked to original sources

Accurate identification of periodic oscillations buried in white or colored noise using fast orthogonal search.

We use a previously introduced fast orthogonal search algorithm to detect sinusoidal frequency components buried in either white or colored noise. We show that the method outperforms the correlogram, modified covariance autoregressive (MODCOVAR) and multiple-signal classification (MUSIC) methods. Fast orthogonal search method achieves accurate detection of sinusoids even with signal-to-noise ratios as low as -10 dB, and is superior at detecting sinusoids buried in 1/f noise. Since the utilized method accurately detects sinusoids even under colored noise, it can be used to extract a 1/f noise process observed in physiological signals such as heart rate and renal blood pressure and flow data.

Algorithms↗

A new algorithm for autoregression moving average model parameter estimation using group method of data handling.

A new algorithm for autoregresive moving average (ARMA) parameter estimation is introduced. The algorithm is based on the group method of data handling (GMDH) first introduced by the Russian cyberneticist, A. G. Ivakhnenko, for solving high-order regression polynomials. The GMDH is heuristic in nature and self-organizes into a model of optimal complexity without any a priori knowledge about the system's inner workings. We modified the GMDH algorithm to solve for ARMA model parameters. Computer simulations have been performed to examine the efficacy of the GMDH and comparison of the GMDH is made to one of the most accurate and one of the most widely used algorithms, the fast orthogonal search (FOS) and the least-squares methods, respectively. The results show that in some cases with noise contamination and incorrect model order assumptions, the GMDH performs better than either the FOS or the least-squares methods in providing only the parameters that are associated with the true model terms.

Algorithms↗

Nonlinear system analysis of renal autoregulation in normotensive and hypertensive rats.

We compared the dynamic characteristics in renal autoregulation of blood flow of normotensive Sprague-Dawley rats (SDR) and spontaneously hypertensive rats (SHR), using both linear and nonlinear systems analysis. Linear analysis yielded only limited information about the differences in dynamics between SDR and SHR. The predictive ability, as determined by normalized mean-square errors (NMSE), of a third-order Volterra model is better than for a linear model. This decrease in NMSE with a third-order model from that of a linear model is especially evident at frequencies below 0.2 Hz. Furthermore, NMSE are significantly higher in SHR than SDR, suggesting a more complex nonlinear system in SHR. The contribution of the third-order kernel in describing the dynamics of renal autoregulation in arterial blood pressure and blood flow was found to be important. Moreover, we have identified the presence of nonlinear interactions between the oscillatory components of the myogenic mechanism and tubuloglomerular feedback (TGF) at the level of whole kidney blood flow in SDR. An interaction between these two mechanisms had previously been revealed for SDR only at the single nephron level. However, nonlinear interactions between the myogenic and TGF mechanisms are not detected for SHR.

Animals↗

Linear and nonlinear ARMA model parameter estimation using an artificial neural network.

This paper addresses parametric system identification of linear and nonlinear dynamic systems by analysis of the input and output signals. Specifically, we investigate the relationship between estimation of the system using a feedforward neural network model and estimation of the system by use of linear and nonlinear autoregressive moving-average (ARMA) models. By utilizing a neural network model incorporating a polynomial activation function, we show the equivalence of the artificial neural network to the linear and nonlinear ARMA models. We compare the parameterization of the estimated system using the neural network and ARMA approaches by utilizing data generated by means of computer simulations. Specifically, we show that the parameters of a simulated ARMA system can be obtained from the neural network analysis of the simulated data or by conventional least squares ARMA analysis. The feasibility of applying neural networks with polynomial activation functions to the analysis of experimental data is explored by application to measurements of heart rate (HR) and instantaneous lung volume (ILV) fluctuations.

Computer Simulation↗

Detection of "noisy" chaos in a time series.

Time series from biological system often displays fluctuations in the measured variables. Much effort has been directed at determining whether this variability reflects deterministic chaos, or whether it is merely "noise". The output from most biological systems is probably the result of both the internal dynamics of the systems, and the input to the system from the surroundings. This implies that the system should be viewed as a mixed system with both stochastic and deterministic components. We present a method that appears to be useful in deciding whether determinism is present in a time series, and if this determinism has chaotic attributes. The method relies on fitting a nonlinear autoregressive model to the time series followed by an estimation of the characteristic exponents of the model over the observed probability distribution of states for the system. The method is tested by computer simulations, and applied to heart rate variability data.

Algorithms↗

A dual-input nonlinear system analysis of autonomic modulation of heart rate.

Linear analyses of fluctuations in heart rate and other hemodynamic variables have been used to elucidate cardiovascular regulatory mechanisms. The role of nonlinear contributions to fluctuations in hemodynamic variables has not been fully explored. This paper presents a nonlinear system analysis of the effect of fluctuations in instantaneous lung volume (ILV) and arterial blood pressure (ABP) on heart rate (HR) fluctuations. To successfully employ a nonlinear analysis based on the Laguerre expansion technique (LET), we introduce an efficient procedure for broadening the spectral content of the ILV and ABP inputs to the model by adding white noise. Results from computer simulations demonstrate the effectiveness of broadening the spectral band of input signals to obtain consistent and stable kernel estimates with the use of the LET. Without broadening the band of the ILV and ABP inputs, the LET did not provide stable kernel estimates. Moreover, we extend the LET to the case of multiple inputs in order to accommodate the analysis of the combined effect of ILV and ABP effect on heart rate. Analyzes of data based on the second-order Volterra-Wiener model reveal an important contribution of the second-order kernels to the description of the effect of lung volume and arterial blood pressure on heart rate. Furthermore, physiological effects of the autonomic blocking agents propranolol and atropine on changes in the first- and second-order kernels are also discussed.

Adult↗

Detection of interactions between myogenic and TGF mechanisms using nonlinear analysis.

Previous studies using linear techniques have provided valuable insights into the dynamic characteristics of whole kidney autoregulation and have led to the general conclusion that the myogenic mechanism and tubuloglomerular feedback (TGF) are highly nonlinear control mechanisms. To explore further the dynamic nature of these nonlinear autoregulatory mechanisms, we introduce the technique of nonlinear modeling using Volterra-Wiener kernels. In the past several years, use of Volterra-Wiener kernels for nonlinear approximation has been most notably applied to neurophysiology. Recent advances in algorithms for computation of the kernels have made this technique more attractive for the study of the dynamics of nonlinear physiological systems, such as the system mediating renal autoregulation. In this study, the general theory and requirements for using this technique are discussed. The feasibility of using the technique on whole kidney pressure and flow data is examined, and a basis for using the Volterra-Wiener kernels to detect interactions between physiological control mechanisms is established. As a result of this method, we have identified the presence of interactions between the oscillating components of the myogenic and the TGF mechanisms at the level of the whole kidney blood flow in normotensive rats. An interaction between these oscillatory components had previously been demonstrated only at the single-nephron level.

Animals↗

Ventilatory load characteristics during ventilatory muscle training.

The response of skeletal muscle to training is influenced by both the intensity and nature of the training stimulus. In this study we investigated the characteristics of the ventilatory load applied to the ventilatory muscles during several different modes of ventilatory muscle training. Patients with chronic obstructive pulmonary disease (COPD) performed the following breathing maneuvers: (1) Unloaded hyperpnea (UH), (2) resistive breathing through a fixed orifice (0.5 cm diameter) at frequencies of 15 and 30 breaths/min (RT15, RT30), (3) loaded breathing through a threshold valve set at 30% of the PImax at frequencies of 15 and 30 breaths/min (TT15, TT30), and (4) repetitive maximal inspiratory maneuvers against a closed shutter (PImax). During these maneuvers were recorded airflow and pressures at the month and esophagus, and from these measurements we derived VE and the work of breathing (WOB), tension time index (TTI), and pressure time product (PTP). The VE during UH was significantly higher than all other modes (p < 0.01), whereas the Pesmax was significantly lower during UH than during the resistive and loaded maneuvers (p < 0.01). The WOB did not differ during UH, TT30, and RT30, but was significantly higher in all three modes than at TT15 and RT15 (p < 0.05). During RT30 the TTI was higher than during TT30, TT15, and RT15 (p < 0.05), whereas the TTI during UH was significantly lower than during other maneuvers (p < 0.01). As expected, the highest Pesmax and PTP were found during the PImax maneuver. These data show that important qualitative differences in ventilatory muscle loading can be achieved by means of different devices and breathing strategies.(ABSTRACT TRUNCATED AT 250 WORDS)

Aged↗

On the efficacy of linear system analysis of renal autoregulation in rats.

In order to assess the linearity of the mechanisms subserving renal blood flow autoregulation, broad-band arterial pressure fluctuations at three different power levels were induced experimentally and the resulting renal blood flow responses were recorded. Linear system analysis methods were applied in both the time and frequency domain. In the frequency domain, spectral estimates employing FFT, autoregressive moving average (ARMA) and moving average (MA) methods were used; only the MA model showed two vascular control mechanisms active at 0.02-0.05 Hz and 0.1-0.18 Hz consistent with previous experimental findings [Holstein-Rathlou et al., Amer. J. Physiol., vol. 258, 1990.]. In the time domain, impulse response functions obtained from the MA model indicated likewise the presence of these two vascular control mechanisms, but the ARMA model failed to show any vascular control mechanism at 0.02-0.05 Hz. The residuals (i.e., model prediction errors) of the MA model were smaller than the ARMA model for all levels of arterial pressure forcings. The observed low coherence values and the significant model residuals in the 0.02-0.05 Hz frequency range suggest that the tubuloglomerular feedback (TGF) active in this frequency range is a nonlinear vascular control mechanism. In addition, experimental results suggest that the operation of the TGF mechanism is more evident at low/moderate pressure fluctuations and becomes overwhelmed when the arterial pressure forcing is too high.

Animals↗

Nonlinear analysis of renal autoregulation under broadband forcing conditions.

Linear analysis of renal blood flow fluctuations, induced experimentally in rats by broad-band (pseudorandom) arterial blood pressure forcing at various power levels, has been unable to explain fully the dynamics of renal autoregulation at low frequencies. This observation has suggested the possibility of nonlinear mechanisms subserving renal autoregulation at frequencies below 0.2 Hz. This paper presents results of 3rd-order Volterra-Wiener analysis that appear to explain adequately the nonlinearities in the pressure-flow relation below 0.2 Hz in rats. The contribution of the 3rd-order kernel in describing the dynamic pressure-flow relation is found to be important. Furthermore, the dependence of 1st-order kernel waveforms on the power level of broadband pressure forcing indicates the presence of nonlinear feedback (of sigmoid type) based on previously reported analysis of a class of nonlinear feedback systems.

Animals↗

Application of fast orthogonal search to linear and nonlinear stochastic systems.

Standard deterministic autoregressive moving average (ARMA) models consider prediction errors to be unexplainable noise sources. The accuracy of the estimated ARMA model parameters depends on producing minimum prediction errors. In this study, an accurate algorithm is developed for estimating linear and nonlinear stochastic ARMA model parameters by using a method known as fast orthogonal search, with an extended model containing prediction errors as part of the model estimation process. The extended algorithm uses fast orthogonal search in a two-step procedure in which deterministic terms in the nonlinear difference equation model are first identified and then reestimated, this time in a model containing the prediction errors. Since the extended algorithm uses an orthogonal procedure, together with automatic model order selection criteria, the significant model terms are estimated efficiently and accurately. The model order selection criteria developed for the extended algorithm are also crucial in obtaining accurate parameter estimates. Several simulated examples are presented to demonstrate the efficacy of the algorithm.

Algorithms↗

Compact and accurate linear and nonlinear autoregressive moving average model parameter estimation using laguerre functions.

A linear and nonlinear autoregressive moving average (ARMA) identification algorithm is developed for modeling time series data. The algorithm uses Laguerre expansion of kernals (LEK) to estimate Volterra-Wiener kernals. However, instead of estimating linear and nonlinear system dynamics via moving average models, as is the case for the Volterra-Wiener analysis, we propose an ARMA model-based approach. The proposed algorithm is essentially the same as LEK, but this algorithm is extended to include past values of the output as well. Thus, all of the advantages associated with using the Laguerre function remain with our algorithm; but, by extending the algorithm to the linear and nonlinear ARMA model, a significant reduction in the number of Laguerre functions can be made, compared with the Volterra-Wiener approach. This translates into a more compact system representation and makes the physiological interpretation of higher order kernels easier. Furthermore, simulation results show better performance of the proposed approach in estimating the system dynamics than LEK in certain cases, and it remains effective in the presence of significant additive measurement noise.

Algorithms↗

Robust nonlinear autoregressive moving average model parameter estimation using stochastic recurrent artificial neural networks.

In this study, we introduce a new approach for estimating linear and nonlinear stochastic autoregressive moving average (ARMA) model parameters, given a corrupt signal, using artificial recurrent neural networks. This new approach is a two-step approach in which the parameters of the deterministic part of the stochastic ARMA model are first estimated via a three-layer artificial neural network (deterministic estimation step) and then reestimated using the prediction error as one of the inputs to the artificial neural networks in an iterative algorithm (stochastic estimation step). The prediction error is obtained by subtracting the corrupt signal of the estimated ARMA model obtained via the deterministic estimation step from the system output response. We present computer simulation examples to show the efficacy of the proposed stochastic recurrent neural network approach in obtaining accurate model predictions. Furthermore, we compare the performance of the new approach to that of the deterministic recurrent neural network approach. Using this simple two-step procedure, we obtain more robust model predictions than with the deterministic recurrent neural network approach despite the presence of significant amounts of either dynamic or measurement noise in the output signal. The comparison between the deterministic and stochastic recurrent neural network approaches is furthered by applying both approaches to experimentally obtained renal blood pressure and flow signals.

Algorithms↗

Nonlinear analysis of renal autoregulation in rats using principal dynamic modes.

This article presents results of the use of a novel methodology employing principal dynamic modes (PDM) for modeling the nonlinear dynamics of renal autoregulation in rats. The analyzed experimental data are broadband (0-0.5 Hz) blood pressure-flow data generated by pseudorandom forcing and collected in normotensive and hypertensive rats for two levels of pressure forcing (as measured by the standard deviation of the pressure fluctuation). The PDMs are computed from first-order and second-order kernel estimates obtained from the data via the Laguerre expansion technique. The results demonstrate that two PDMs suffice for obtaining a satisfactory nonlinear dynamic model of renal autoregulation under these conditions, for both normotensive and hypertensive rats. Furthermore, the two PDMs appear to correspond to the two main autoregulatory mechanisms: the first to the myogenic and the second to the tubuloglomerular feedback (TGF) mechanism. This allows the study of the separate contributions of the two mechanisms to the autoregulatory response dynamics, as well as the effects of the level of pressure forcing and hypertension on the two distinct autoregulatory mechanisms. It is shown that the myogenic mechanism has a larger contribution and is affected only slightly, while the TGF mechanism is affected considerably by increasing pressure forcing or hypertension (the emergence of a second resonant peak and the decreased relative contribution to the response flow signal).

Animals↗