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Jonathan Dushoff

Publications and source records attributed to Jonathan Dushoff.

21 records · Page 2Linked to original sources

Metapopulations, community assembly, and scale invariance in aspect space.

The hierarchical competition model has been a useful tool in investigating the mechanisms of coexistence between competing species, and thus for understanding the foundations of biodiversity. Here we show that the geometric picture of community assemblage found by Nowak and May for the constant-fecundity version of this model can be extended to a whole family of tradeoffs between fecundity and mortality. In this picture, the proportion of the remaining space used by a species can be related to the amount of free space (in aspect space) behind the "competitive shadow" of the adjacent superior competitor, and in turn to the size of the competitive shadow cast by the species itself. We show that this geometric model is scale invariant in the rescaled aspect space and use this fact to investigate the limits to diversity and explore how communities assemble under this model.

Animals↗

Pathogen-Driven Outbreaks in Forest Defoliators Revisited: Building Models from Experimental Data.

Models of outbreaks in forest-defoliating insects are typically built from a priori considerations and tested only with long time series of abundances. We instead present a model built from experimental data on the gypsy moth and its nuclear polyhedrosis virus, which has been extensively tested with epidemic data. These data have identified key details of the gypsy moth-virus interaction that are missing from earlier models, including seasonality in host reproduction, delays between host infection and death, and heterogeneity among hosts in their susceptibility to the virus. Allowing for these details produces models in which annual epidemics are followed by bouts of reproduction among surviving hosts and leads to quite different conclusions than earlier models. First, these models suggest that pathogen-driven outbreaks in forest defoliators occur partly because newly hatched insect larvae have higher average susceptibility than do older larvae. Second, the models show that a combination of seasonality and delays between infection and death can lead to unstable cycles in the absence of a stabilizing mechanism; these cycles, however, are stabilized by the levels of heterogeneity in susceptibility that we have observed in our experimental data. Moreover, our experimental estimates of virus transmission rates and levels of heterogeneity in susceptibility in gypsy moth populations give model dynamics that closely approximate the dynamics of real gypsy moth populations. Although we built our models from data for gypsy moth, our models are, nevertheless, quite general. Our conclusions are therefore likely to be true, not just for other defoliator-pathogen interactions, but for many host-pathogen interactions in which seasonality plays an important role. Our models thus give qualitative insight into the dynamics of host-pathogen interactions, while providing a quantitative interpretation of our gypsy moth-virus data.

Lymantria dispar↗

Evolution and persistence of influenza A and other diseases.

The evolution of the etiological agents of disease presents one of the greatest challenges for their control, and makes essential complementing standard epidemiological investigations with broader approaches that allow for evolutionary change. Given the stunning genetic diversity that is possible for many such agents, such as the influenza virus, it is impossible to represent all of the diversity manifest at the level of amino acid sequences. We show that drift-variant influenza strains naturally cluster into groups which are associated with functionally important epitopic regions. Dominant clusters typically replace each other every 2-5 years, and this feature is fundamental to the development of vaccination strategies. We furthermore show that stochastic fluctuations can greatly magnify small interference effects among strains, or even among subtypes, leading for example to competitive exclusion in situations where such effects would be unexpected based on the usual deterministic models. We suggest that this effect might be involved in the explanations of some persistent empirical anomalies.

Animals↗