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Biomedical subjects

Jitae Kim

Publications and source records attributed to Jitae Kim.

3 recordsLinked to original sources

Lab on a CD.

In this paper, centrifuge-based microfluidic platforms are reviewed and compared with other popular microfluidic propulsion methods. The underlying physical principles of centrifugal pumping in microfluidic systems are presented and the various centrifuge fluidic functions, such as valving, decanting, calibration, mixing, metering, heating, sample splitting, and separation, are introduced. Those fluidic functions have been combined with analytical measurement techniques, such as optical imaging, absorbance, and fluorescence spectroscopy and mass spectrometry, to make the centrifugal platform a powerful solution for medical and clinical diagnostics and high throughput screening (HTS) in drug discovery. Applications of a compact disc (CD)-based centrifuge platform analyzed in this review include two-point calibration of an optode-based ion sensor, an automated immunoassay platform, multiple parallel screening assays, and cellular-based assays. The use of modified commercial CD drives for high-resolution optical imaging is discussed as well. From a broader perspective, we compare technical barriers involved in applying microfluidics for sensing and diagnostic use and applying such techniques to HTS. The latter poses less challenges and explains why HTS products based on a CD fluidic platform are already commercially available, whereas we might have to wait longer to see commercial CD-based diagnostics.

Biological Assay↗

Cell lysis on a microfluidic CD (compact disc).

Cell lysis was demonstrated on a microfluidic CD (Compact Disc) platform. In this purely mechanical lysis method, spherical particles (beads) in a lysis chamber microfabricated in a CD, cause disruption of mammalian (CHO-K1), bacterial (Escherichia coli), and yeast (Saccharomyces cerevisiae) cells. Interactions between beads and cells are generated in the rimming flow established inside a partially filled annular chamber in the CD rotating around a horizontal axis. To maximize bead-cell interactions in the lysis chamber, the CD was spun forward and backwards around this axis, using high acceleration for 5 to 7 min. Investigation on inter-particle forces (friction and collision) identified the following parameters; bead density, angular velocity, acceleration rate, and solid volume fraction as having the most significant contribution to cell lysis. Cell disruption efficiency was verified either through direct microscopic viewing or measurement of the DNA concentration after cell lysing. Lysis efficiency relative to a conventional lysis protocol was approximately 65%. In the long term, this work is geared towards CD based sample-to-answer nucleic acid analysis which will include cell lysis, DNA purification, DNA amplification, and DNA hybridization detection.

Animals↗

Estimation of lifted weight and produced effort through perception of point-light display.

It has been shown that human observers can estimate the weight of a box from the observation of a point-light display of a lifting motion. We asked observers to report the weight of the box and the effort produced by five lifters ranging in size and strength to determine if observers can perceive lifter size. In experiment 1, five or six weights from each of five lifters were shown to fourteen observers in a random order. Observers showed less error in estimating the amount of effort each lifter produced than in estimating the actual weight of the box. In experiment 2, the lifters were presented individually to forty observers to remove any effect observing a previous lift might have had on estimating the subsequent lift by a different lifter. The results showed an improvement in estimated weight but not in estimated effort. In experiment 3, the actual size of the lifters was given to thirty-four observers, and the estimations of both weight and effort improved. In experiment 4, observers did not improve when observing practice trials and estimating either only weight or only effort. The results from the four experiments suggest that observers are more sensitive to lifter's effort than to the weight lifted, and that observers tend to use changes in the velocity profile of the lift when making their estimates.

Adult↗