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J G Compton

Publications and source records attributed to J G Compton.

44 records · Page 3Linked to original sources

Comparison of active mutants and wild-type aspartate transcarbamoylase of Escherichia coli.

Two active mutants of aspartate transcarbamoylase from Escherichia coli have been purified from strains which produce large quantities of enzyme. Each enzyme was isolated from a different spontaneous revertant of a pyrimidine auxotrophic strain produced by mutagenesis with nitrogen mustard. Both enzymes exhibit allosteric properties with one having significantly less and the other more cooperativity than wild-type enzyme. Isolated catalytic subunits had different values of Km and Vmax. Studies on hybrids constructed from mutant catalytic and wild-type regulatory subunits (and vice versa) indicate that catalytic chains encoded by pyrB and not the regulatory chains encoded by pyrI were affected by the mutations. Differential scanning calorimetry experiments support these conclusions. Both mutant enzymes undergo ligand-promoted conformational changes analogous to those exhibited by wild-type enzyme: a 3% decrease in the sedimentation coefficient and a 5-fold increase in the reactivity of the sulfhydryl groups of the regulatory chains. Interactions between catalytic and regulatory chains in the mutants are weaker than those in the wild-type enzyme. The gross conformational changes of the mutants upon adding the bisubstrate ligand, N-(phosphonacetyl)-L-aspartate, in the presence of the substrate, carbamoylphosphate, and the activator, ATP, correlate with differences in cooperativity. The mutant with lower cooperativity is more readily converted from the low-affinity, compact, T-state to the high-affinity, swollen, R-state than is wild-type enzyme; this conversion for the more cooperative enzyme is energetically less favorable.

Aspartate Carbamoyltransferase↗

Progesterone receptor binding to DNA: studies by sedimentation velocity methods.

Chicken oviduct progesterone receptor subunit A (Mr = 79000) was partially purified as a hormone-receptor complex labeled with [3H]progesterone. These complexes adsorb to DNA-cellulose; sucrose gradient ultracentrifugation showed a sedimentation coefficient of 3.6 S. Receptors were mixed with [32P]DNA fragments of various types derived from bacterial plasmid pBR322. DNA structures tested included linear double-stranded and single-stranded molecules as well as supercoiled intact plasmids. [3H]Receptors were mixed in various molar ratios with [32P]DNA (nominal sed. coeff. = 18 S) and the mixtures were analyzed by sedimentation velocity ultracentrifugation performed in 5-20% sucrose gradients. In the presence of excess DNA, all of the [3H]receptor sedimented with the DNA fraction. Titrations revealed an apparent Kdiss between 1 and 5 nM. Distribution of receptor counts over the slower-sedimenting edge of the DNA peaks allowed estimation of the half-life of these complexes, which was in excess of 35 min at 0 degree C. Double-label counting of [3H]receptor-[32P]DNA complexes revealed an increase in the sedimentation coefficient of linear double-stranded DNA as increasing receptor input was used. Analysis of this S-value shift showed evidence for cooperative receptor binding isotherms, causing dramatic compaction (or other topological constraints) on the DNA. A speculative schematic model of receptor A-DNA interaction is presented, consistent with the experimental results.

Animals↗

DNA sequence preference of the progesterone receptor.

Highly purified hen oviduct progesterone receptor A subunit was tested for binding to several chicken gene DNAs. Sequence preference detected by nitrocellulose filter adsorption of [32P]DNA fragments obtained from recombinant plasmids revealed a marked retention of certain DNA fragments. About a 10-fold preference was seen for DNA fragments flanking the 5' end of the steroid-regulated genes ovalbumin and gene Y. No preference was seen with analogous DNA fragments from chicken beta-globin and alpha-actin genes. Restriction endonuclease mapping suggests the presence of multiple receptor interaction sites flanking the 5' terminus of the ovalbumin gene. One of these preferential binding sites was localized between -135 and -247 base pairs upstream from the start of transcription. This region contains an 18-base-pair A + T-rich sequence, a likely candidate for the binding site itself, because earlier studies had shown receptor A to have marked preference for A + T-rich DNA.

Animals↗

Interaction of the chick oviduct progesterone receptor with deoxyribonucleic acid.

The purified DNA binding component (receptor A) of the chick oviduct progesterone receptor has been analyzed for its ability to bind to the cloned ovalbumin gene and to plasmid DNA of various structural compositions. The rapid equilibrium filter adsorption assay of Riggs et al. [Riggs, A. D., Suzuki, H., & Bourgeois, S. (1970) J. Mol. Biol. 48, 67] has been used to demonstrate high affinity binding of the protein to DNA (Kdiss = 10(-10) M at 50 mM KCl, pH 7.2). Studies of association rates are consistent with equilibrium measurements (t 1/2 = 40-80 min). Association of purified receptor with DNA and the kinetics of the interaction have been verified independently by velocity sedimentation techniques. Direct binding assays were performed with the ovalbumin structural gene (cDNA), the entire natural ovalbumin gene containing seven intervening sequences, and various ovalbumin gene fragments coding for the 5' end of the nuclear precursor RNA, intron-exon junctions, and the 3'-noncoding region of the gene. No DNA-sequence specificity was identified for the binding of the receptor protein to any region of ovalbumin gene DNA. In contrast, the structural integrity of the DNA template greatly affected receptor binding. The poorest affinity was to supercoiled DNA and to blunt end, linear duplex gene fragments. The receptor bound saturably to DNA containing limited nicks but became nonsaturable as nicks were increased. Binding of the protein to double-stranded DNA increased susceptibility of the DNA to digestion by the enzyme S1, a single strand specific nuclease. On the basis of preferential receptor binding to single-stranded DNA, a possible mechanism involving DNA helix destabilization is discussed.

Animals↗