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J Ferrer

Publications and source records attributed to J Ferrer.

At least 37 records · Page 2Linked to original sources
PubMed2004

An extension of ASM2d including pH calculation.

This paper presents an extension of the Activated Sludge Model No. 2d (ASM2d) including a chemical model able to calculate the pH value in biological processes. The developed chemical model incorporates the complete set of chemical species affecting the pH value to ASM2d describing non-equilibrium biochemical processes. It considers the system formed by one aqueous phase, in which biochemical processes take place, and one gaseous phase, and is based on the assumptions of instantaneous chemical equilibrium under liquid phase and kinetically governed mass transport between the liquid and gas phase. The ASM2d enlargement comprises the addition of every component affecting the pH value and an ion-balance for the calculation of the pH value and the dissociation species. The significant pH variations observed in a sequencing batch reactor operated for enhanced biological phosphorus removal were used to verify the capability of the extended model for predicting the dynamics of pH jointly with concentrations of acetic acid and phosphate. A pH inhibition function for polyphosphate accumulating bacteria has also been included in the model to simulate the behaviour observed. Experimental data obtained in four different experiments (with different sludge retention time and influent phosphorus concentrations) were accurately reproduced.

Bioreactors↗
PubMed2004

Use of biological and sedimentation models for designing Peñíscola WWTP.

This paper presents Peñíscola wastewater treatment plant design. Peñíscola is a tourist city in Castellón (Spain), whose population changes significantly between summer and the rest of the year. The design of the biological and settling treatment units has been confirmed by computer model simulations and provided for biological organic matter, nitrogen and phosphorus removal. Two different treatment schemes have been proposed in order to optimize the plant performance during both seasonal operations. During low-load season, the plant will be operated under extended aeration conditions, so further sludge stabilization will not be needed. During high-load season, the plant will be operated under conventional process conditions and excess sludge will be aerobically digested. Since the treated water will be reused for irrigation purposes, biological nutrient removal has been considered in this design. Phosphorus released during aerobic digestion must be removed by chemical precipitation in the supernatant from dewatering process. In this way, deterioration of the enhanced biological phosphorus removal process caused by phosphate recirculation can be avoided. Mathematical models have proven to be very useful to make decisions about plant design and operation, mainly in situations with significant variations in the influent load and flow-rate. Several operation conditions have been simulated to obtain optimum operation criteria for both seasons.

Geologic Sediments↗
PubMed2004

Biological nutrient removal model No.1 (BNRM1).

This paper presents the results of the work carried out by the CALAGUA Group on Mathematical Modelling of Biological Treatment Processes: the Biological Nutrient Removal Model No.1. This model is based on a new concept for dynamic simulation of wastewater treatment plants: a unique model can be used to design, simulate and optimize the whole plant, as it includes most of the biological and physico-chemical processes taking place in all treatment operations. The physical processes included are: settling and clarification processes (flocculated settling, hindered settling and thickening), volatile fatty acids elutriation and gas-liquid transfer. The chemical interactions included comprise acid-base processes, where equilibrium conditions are assumed. The biological processes included are: organic matter, nitrogen and phosphorus removal; acidogenesis, acetogenesis and methanogenesis. Environmental conditions in each operation unit (aerobic, anoxic or anaerobic) will determine which bacterial groups can grow. Thus, only the model parameters related to bacterial groups able to grow in any of the operation units of a specific WWTP will require calibration. One of the most important advantages of this model is that no additional analysis with respect to ASM2d is required for wastewater characterization. Some applications of this model have also been briefly explained in this paper.

Acid-Base Equilibrium↗
PubMed2004

Calibration and simulation of two large wastewater treatment plants operated for nutrient removal.

Control and optimisation of plant processes has become a priority for WWTP managers. The calibration and verification of a mathematical model provides an important tool for the investigation of advanced control strategies that may assist in the design or optimization of WWTPs. This paper describes the calibration of the ASM2d model for two full scale biological nitrogen and phosphorus removal plants in order to characterize the biological process and to upgrade the plants' performance. Results from simulation showed a good correspondence with experimental data demonstrating that the model and the calibrated parameters were able to predict the behaviour of both WWTPs. Once the calibration and simulation process was finished, a study for each WWTP was done with the aim of improving its performance. Modifications focused on reactor configuration and operation strategies were proposed.

Bioreactors↗
PubMed2003

Alpha-amylase activity from the halophilic archaeon Haloferax mediterranei.

The halophilic archaeon Haloferax mediterranei is able to grow in a minimal medium containing ammonium acetate as a carbon and nitrogen source. When this medium is enriched with starch, alpha-amylase activity is excreted to the medium in low concentration. Here we report methods to concentrate and purify the enzyme. The relative molecular mass of the enzyme, determined by gel filtration, is 50 +/- 4 kDa, and on SDS-PAGE analysis a single band appeared at 58 kDa. These results indicated that the halophilic alpha-amylase is a monomeric enzyme. The enzyme showed a salt requirement for both stability and activity, being stable from 2 to 4 M NaCl, with maximal activity at 3 M NaCl. The enzyme displayed maximal activity at pHs from 7 to 8, and its optimal temperature was in a range from 50 degrees C to 60 degrees C. The results also implicated several prototropic groups in the catalytic reaction.

Animals↗
PubMed2003

[Adult living donor liver transplantation. Analysis of the first 30 cases].

INTRODUCTION: In the last 2-3 years, adult living donor liver transplantation (ALDLT) has been developed on an international scale, multiplying the number of procedures performed. Despite this, analysis of the results is still incomplete. The aim of the present study was to perform a descriptive analysis of the results after the first 3 years of the initiation of the program. MATERIAL AND METHODS: During this period, 30 ALDLT were performed. In all procedures, right lobe grafts were used. The mean age of donors and recipients was 31.8 and 52.7 years, respectively. The main indication for liver transplantation was liver cirrhosis due to hepatitis C virus (70%) and 38% of recipients were stage C in the Child-Pugh classification. A total of 46.7% of recipients had hepatocellular carcinoma. RESULTS: Donors: The mean volume of the remnant liver was 632 cc (40.5% of the previous hepatic mass). Ten donors (33%) presented complications. The most frequent complication was biliary fistula (20%) and three patients required reintervention. The mean length of hospital stay among donors was 11.7 days. Recipients: The mean weight of the graft was 775 g, with a mean difference between graft weight and that of the recipient of 1.11. Fifteen recipients (50%) presented biliary leaks and nine of these (30%) required reintervention. There were no graft losses for technical reasons. Four patients died. With a median follow-up of 14 months, actuarial survival at 18 months was 92.9%. CONCLUSION: ALDLT is an effective method for reducing the number of patients on the waiting list. The probability of survival is similar to that of cadaveric transplantation. Biliary complications in the recipient constitute a problem, the long-term repercussions of which remain to be resolved.

Adolescent↗
PubMed2003

Pattern of cognitive dysfunction in depressive patients during maintenance electroconvulsive therapy.

BACKGROUND: Objective data regarding adverse cognitive deficits associated with maintenance electroconvulsive therapy (M-ECT) are lacking. This study examined the cognitive state of depressive patients during M-ECT. METHOD: A cross-sectional study was carried out in 11 depressive patients in remission, all with a DSM-IV diagnosis of major depressive disorder. The mean number of previous ECT sessions was 36.1, and the mean intersession interval was 52.7 days. A group of 11 patients who had not received ECT was selected for comparison and matched for diagnosis, sex, age and years of schooling. All subjects were assessed using a complete neuropsychological battery including memory, attention and frontal function tests. RESULTS: Groups did not present differences in long delay verbal recall. Encoding of new information and results on the frontal function tests were significantly lower in the M-ECT patients. CONCLUSION: Depressed patients preserve long-term memory, but suffer short-term memory impairment and frontal function alteration during M-ECT. Further longitudinal studies are necessary to determine the influence of M-ECT on non-memory functions and different memory subtypes.

Cognition Disorders↗
PubMed2003

Design of nutrient removal activated sludge systems.

A mechanistic mathematical model for nutrient and organic matter removal was used to describe the behavior of a nitrification denitrification enhanced biological phosphorus removal (NDEBPR) system. This model was implemented in a user-friendly software DESASS (design and simulation of activated sludge systems). A 484-L pilot plant was operated to verify the model results. The pilot plant was operated for three years over three different sludge ages. The validity of the model was confirmed with data from the pilot plant. Also, the utility of DESASS as a valuable tool for designing NDEBPR systems was confirmed.

Bioreactors↗
PubMed2002

Rare variants identified in the HNF- 4 alpha beta-cell-specific promoter and alternative exon 1 lack biological significance in maturity onset diabetes of the young and young onset Type II diabetes.

AIMS/HYPOTHESIS: The recently identified alternative promoter (P2) of HNF-4 alpha is the major HNF-4 alpha transcription start site in pancreatic beta cells. The significance of the P2 promoter was shown by the identification of a mutation in the IPF-1 binding site of the alternative promoter which cosegregated with diabetes in a large MODY family. The role of the P2 promoter and the associated alternative exon 1 in both MODY and polygenic Type II (non-insulin-dependent) diabetes mellitus is not known. Linkage to this region in studies of Type II diabetes makes the P2 region a strong candidate for a role in Type II diabetes susceptibility. METHODS: To assess the role of the P2 region we screened MODY, young-onset Type II diabetic subjects, and probands from Type II diabetes families linked to chromosome 20 for variants of the P2 promoter and associated exon of HNF-4 alpha. RESULTS: Two variants were found that were not present in the control subjects. The -79 C/T substitution was present in a MODY family but did not perfectly cosegregate with diabetes. A -276 G/T substitution was identified in two UK young-onset diabetes probands but did not co-segregate with diabetes. Reporter gene studies did not indicate changes in transcriptional activity caused by either the -79 C/T or -276 G/T single nucleotide substitutions. CONCLUSION/INTERPRETATION: We found no evidence to suggest that variation in the P2 proximal promoter region and associated alternative exon 1 of HNF-4 alpha contribute to young onset Type II diabetes susceptibility in Northern Europeans.

Adolescent↗
PubMed2002

Combined analysis of T cell receptor gamma and immunoglobulin heavy chain gene rearrangements at the single-cell level in lymphomas with dual genotype.

By prospectively studying immunoglobulin heavy chain gene (IgH) and T cell receptor gamma (TCRgamma) gene rearrangements in 398 lymphoma cases, a dual genotype was observed in 13% of B cell and 11% of T cell lymphomas. According to histological subtype, the highest incidence was observed for mantle cell lymphomas (32%) and lymphoplasmacytic lymphoma (21%) among B cell lymphomas, and for angioimmunoblastic lymphoma (AILT) (46%) and Sézary syndrome (SS) (50%) among T cell lymphomas. To determine whether the dual genotype corresponds to the presence of two distinct monoclonal populations or to the presence of both rearrangements within the same lymphoma cells, single-cell microdissection was used after immunohistochemistry and a single-cell combined IgH and TCRgamma gene analysis was designed after a whole-genome amplification step. This protocol was applied to the study of two nodal B cell lymphomas (one diffuse large B cell lymphoma and one mantle cell lymphoma) and two cutaneous T cell lymphomas (one AILT and one SS). Two cases (SS and mantle cell lymphoma) were true bigenotypic lymphomas, as both IgH and TCRgamma monoclonal rearrangements were detected in the same cells. Conversely, in the diffuse large B cell lymphoma and AILT cases, large CD22+ single cells exhibited only the monoclonal IgH rearrangement but not the TCRgamma gene that was detected in CD3+ single cells. Such an approach allows the identification of true bigenotypic lymphoma among dual genotypic lymphoma. Specific genetic alterations may be further amplified from microdissected cryopreserved material, such as the t(11;14) breakpoint detected in bigenotypic B cells of the mantle cell lymphoma case.

Chromosomes, Human, Pair 11↗
PubMed2002

Modelling of an activated primary settling tank including the fermentation process and VFA elutriation.

A complete model of a primary settler including both sedimentation and biological processes is presented. It is a one-dimensional model based on the solids flux concept and the conservation of mass that uses the Takács model for the settling velocity, which is corrected by a compression function in the lower layers. The biological model is based on the ASM2 and enlarged with the fermentation model proposed by this research group. The settler was split in ten layers and the flux terms in the mass balance for each layer is obtained by means of the settling model. A pilot plant has been operated to study the primary sludge fermentation and volatile fatty acids (VFA) elutriation in a primary settler tank. The model has been tested with pilot plant experimental data with very good results. It has been able to simulate the VFA production in the settler and their elutriation with the influent wastewater for all the studied experiments. The developed model is easily applicable to secondary settlers and thickeners, also taking into account biological activity inside them.

Biodegradation, Environmental↗
PubMed2002

Calibration and validation of activated sludge model No.2d for Spanish municipal wastewater.

Activated Sludge Model No. 2d (ASM2d) was validated with data obtained from pilot scale plant treating municipal wastewater from the city of Valencia (Spain). First of all, ASM2d was calibrated using experimental data from anaerobic, anoxic and aerobic batches. A set of kinetic and stoichiometric parameters resulted from these assays. Differences between the values obtained and default values proposed in ASM2d can be explained by the presence of glycogen accumulating organisms (GAOs). The calibrated model was then used to simulate results from a pilot plant. Simulation using the set of parameters obtained accurately reproduces experimental results. This paper also presents a detailed procedure to estimate kinetic and stoichiometric parameters for heterotrophic, autotrophic and polyphosphate accumulating bacteria.

Bacteria, Aerobic↗
PubMed2002

A supervisory control system for optimising nitrogen removal and aeration energy consumption in wastewater treatment plants.

A fuzzy logic supervisory control system for optimising nitrogen removal and aeration energy consumption has been developed. This control system allows optimising and controlling the dissolved oxygen (DO) concentration in the aerobic reactors, the blowers discharge pressure and the effluent ammonia and nitrate concentrations. DO is controlled by adjusting control valve opening and blower discharge pressure is controlled by modifying rotational speed of the blowers. Optimum nitrification/denitrification is achieved by modifying the DO set point in the last aerobic reactor and the internal recirculation. This system has been tested by simulation in a Bardenpho process using the Activated Sludge Model No2. A significant improvement in stability on the activated sludge process is achieved. Moreover, significant energy saving has been achieved with this control strategy.

Aerobiosis↗
PubMed2001

Crystallization and preliminary X-ray analysis of glucose dehydrogenase from Haloferax mediterranei.

Glucose dehydrogenase (E.C. 1.1.1.47; GlcDH) from Haloferax mediterranei has been overexpressed in Escherichia coli, solubilized by the addition of 8 M urea and refolded by rapid dilution. The protein has been purified by conventional techniques and crystallized by the hanging-drop vapour-diffusion method using sodium citrate as the precipitant. Two crystal forms representing the free enzyme and the binary complex with NADP(+) grow under these conditions. Crystals of form I diffract to beyond 3.5 A resolution and belong to the hexagonal space group P622, with unit-cell parameters a = b = 89.1, c = 214.6 A, alpha = beta = 90, gamma = 120 degrees. Crystals of form II diffract to greater than 2.0 A and belong to the orthorhombic space group I222 or I2(1)2(1)2(1), with unit-cell parameters a = 61.8, b = 110.9, c = 151.7 A, alpha = beta = gamma = 90 degrees. Calculated values for V(M) and consideration of the packing for both crystal forms suggests that the asymmetric units in both crystal forms contain a monomer.

Crystallization↗
PubMed2001

A transcription factor regulatory circuit in differentiated pancreatic cells.

Mutations in the human genes encoding hepatocyte nuclear factors (HNF) 1alpha, 1beta, 4alpha, and IPF1(PDX1/IDX1/STF1) result in pancreatic beta cell dysfunction and diabetes mellitus. In hepatocytes, hnf4alpha controls the transcription of hnf1alpha, suggesting that this same interaction may operate in beta cells and thus account for the common diabetic phenotype. We show that, in pancreatic islet and exocrine cells, hnf4alpha expression unexpectedly depends on hnf1alpha. This effect is tissue-specific and mediated through direct occupation by hnf1alpha of an alternate promoter located 45.6 kb from the previously characterized hnf4alpha promoter. Hnf1alpha also exerts direct control of pancreatic-specific expression of hnf4gamma and hnf3gamma. Hnf1alpha dependence of hnf4alpha, hnf4gamma, hnf3gamma, and two previously characterized distal targets (glut2 and pklr) is established only after differentiated cells arise during pancreatic embryonic development. These studies define an unexpected hierarchical regulatory relationship between two genes involved in human monogenic diabetes in the cells, which are relevant to its pathophysiology. Furthermore, they indicate that hnf1alpha is an essential component of a transcription factor circuit whose role may be to maintain differentiated functions of pancreatic cells.

Animals↗
PubMed2001

First field trial of a transmissible recombinant vaccine against myxomatosis and rabbit hemorrhagic disease.

As a novel approach for immunisation of wild rabbits, we have recently developed a transmissible vaccine against myxomatosis and rabbit hemorrhagic disease (RHD) based on a recombinant myxoma virus (MV) expressing the RHDV capsid protein [J. Virol. 74 (2000) 1114]. The efficacy and safety of the vaccine have been extensively evaluated under laboratory conditions. In this study, we report the first limited field trial of the candidate vaccine that was undertaken in an island of 34 Has containing a population of around 300 rabbits. Following administration by the subcutaneous route to 76 rabbits, the vaccine induced specific antibody responses against both myxomatosis and RHDV in all the inoculated rabbits. Furthermore, the recombinant virus exhibited a limited horizontal transmission capacity, promoting seroconversion of around 50% of the uninoculated rabbit population. No evidence of undesirable effects due to the recombinant virus field release was detected.

Animals↗