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Biomedical subjects

J A Yorke

Publications and source records attributed to J A Yorke.

10 recordsLinked to original sources

Crossing bifurcations and unstable dimension variability.

A crisis is a global bifurcation in which a chaotic attractor has a discontinuous change in size or suddenly disappears as a scalar parameter of the system is varied. In this Letter, we describe a global bifurcation in three dimensions which can result in a crisis. This bifurcation does not involve a tangency and cannot occur in maps of dimension smaller than 3. We present evidence of unstable dimension variability as a result of the crisis. We then derive a new scaling law describing the density of the new portion of the attractor formed in the crisis. We illustrate this new type of bifurcation with a specific example of a three-dimensional chaotic attractor undergoing a crisis.

Journal Article↗

Local low dimensionality of atmospheric dynamics.

A statistic, the BV (bred vector) dimension, is introduced to measure the effective local finite-time dimensionality of a spatiotemporally chaotic system. It is shown that the Earth's atmosphere often has low BV dimension, and the implications for improving weather forecasting are discussed.

Journal Article↗

Stagger-and-step method: detecting and computing chaotic saddles in higher dimensions.

Chaotic transients occur in many experiments including those in fluids, in simulations of the plane Couette flow, and in coupled map lattices. These transients are caused by the presence of chaotic saddles, and they are a common phenomenon in higher dimensional dynamical systems. For many physical systems, chaotic saddles have a big impact on laboratory measurements, but there has been no way to observe these chaotic saddles directly. We present the first general method to locate and visualize chaotic saddles in higher dimensions.

Journal Article↗

Anti-human cytomegalovirus activity of cytokines produced by CD4+ T-cell clones specifically activated by IE1 peptides in vitro.

The control of latent cytomegalovirus (CMV) infections by the immune system is poorly understood. We have previously shown that CD4+ T cells specific for the human CMV major regulatory protein IE1 are frequent in latently infected healthy blood donors. In order to learn about the possible role of these cells, we have developed IE1-specific CD4+ T-cell clones and, in this study, analyzed their epitope specificity and function in vitro. We measured their cytokine production when stimulated with specific IE1 peptides or whole recombinant IE1 protein. Their cytokine profiles, as deduced from gamma interferon (IFN-gamma), tumor necrosis factor alpha (TNF-alpha), and interleukin-4 (IL-4) and IL-6 production, were of the Th0- and Th1-like phenotypes. Supernatants from IE1-specific clones producing IFN-gamma and TNF-alpha were shown to inhibit CMV replication in U373 MG cells. This effect was due, as found by using cytokine-specific neutralizing antibodies, mostly to IFN-gamma, which was secreted at higher levels than TNF-alpha. To better assess the anti-CMV activity of cytokines, recombinant IFN-gamma and TNF-alpha were used and shown to have a synergistic effect on the inhibition of CMV replication and protein expression. Thus, IE1-specific CD4+ T cells display in vitro anti-CMV activity through cytokine secretion and may play a role in the control of in vivo latent infections.

Antiviral Agents↗

Seasonality and the requirements for perpetuation and eradication of viruses in populations.

Perpetuation of a virus in a population is distinct from the ability to persist in a cell culture or individual host. Parameters which determine perpetuation include: 1) the size of the population; 2) the turnover of the population; 3) the proportion of immunes in the population; 4) the transmissibility of the infection; and 5) the generation time between sequential infections. These parameters may be grouped into two composite factors which most directly affect transmission dynamics and perpetuation: (a) population turnover per generation period, and (b) transmissibility or the fraction of susceptibles infected per existing infection. Perpetuation in small populations usually requires either the ability to persist in individuals or rapid population turnover. Conversely, human viruses which initiate only acute infections require larger populations to persist. Seasonal variation in transmissibility can greatly increase the minimum population size in which persistence is possible, and we argue that the population size of 500,000 for measles persistence (described by Bartlett) is primarily a consequence of seasonal variation. Computer modelling can be used to examine the effect of changes in parameters which determine the seasonal cycle of virus perpetuation and fadeout. Finally, human infections are reviewed to indicate those which have been eradicated (smallpox), are on the threshold of eradication (poliomyelitis), are possibly eradicable (measles), or could be candidates for future efforts (hepatitis A and hepatitis B). In developing a strategy for eradication two points are of great potential utility: first, the seasonal trough should be exploited as a time for effective intervention; and, second, containment efforts should be directed at epidemiologically important population groupings such as schools.

Animals↗

Behavioral rhythms in schizophrenia.

Daily behavioral observations were made for several years on 10 male schizophrenic patients and on three male patients with organic brain disorders. Analysis of these data showed strong cyclic components in the five schizophrenic patients with predominantly hebephrenic symptomatology. Period lengths noted were about 2 days, 5 to 6 days, 30 days, and a longer cycle of 40 to 100 days duration. Antipsychotic medications appear to have a suppressant effect, but tricyclic antidepressants may enhance pre-existing rhythms.

Adult↗

Predator-prey patterns.

A graph-theoretic condition is given for the existence of stable solutions to the Volterra-Lotka equations.

Journal Article↗

Dynamics and control of the transmission of gonorrhea.

Calculations revealed that approximately a third of the reported cases of gonorrhea in women during 1973-1975 were discoveries of the screening program. Theoretical models and epidemiologic data showed that the prevalence of gonorrhea adjusts rapidly to changes in social behavior, medical treatment, and control programs, that prevalence oscillates seasonally around an equilibrium state determined by the current social and medical conditions, and that this equilibrium moves as epidemiologic conditions change. The incidence of gonorrhea is theoretically limited by saturation in a sexually active core population, and this core causes gonorrhea to remain endemic.

Female↗