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Biomedical subjects

I McNulty

Publications and source records attributed to I McNulty.

10 recordsLinked to original sources

Structure and dynamics of a nanocolloidal silica gel dispersion.

We studied the structure and the dynamics of a nanocolloidal silica gel dispersed in an organic solvent [octylcyanobiphenyl (8CB)] as a function of the silica density by x-ray intensity fluctuation spectroscopy (XIFS). The silica density of the dispersed aerosil gel samples ranged from 0.03 to 0.20 g cm-3 and the autocorrelation of the silica scattering was probed over the q range from 0.03 to 0.15 nm-1 (corresponding to length scales from 42 to 209 nm) at a constant room temperature at which 8CB is in the smectic-A phase. The gel structure has a fractal dimension in this density range of df approximately 2.15. The time autocorrelation functions of the gels show clear density-dependent and complex dynamics. The gel relaxation times are very long and become bimodal with nonergodic character for densities from 0.10 to 0.16 g cm-3. In this same density range, the fluctuation contrast (strength) is a minimum while the relaxation time becomes independent of wave vector. Together, these results indicate that there is a narrow silica density range for these gels in which the dynamics changes dramatically. This suggests a complex phase diagram for the dynamics of aerosil gels as a function of densification.

Journal Article↗

Synchrotron beam coherence: a spatially resolved measurement.

We report a precise and spatially resolved measurement of the complex degree of coherence of a one-dimensional 1.5-keV beam produced by a third-generation synchrotron source. The method of phase-space tomography is used, which requires only measurements of the x-ray intensity. We find that the field is statistically stationary to within experimental error, the correlations are very well approximated by a Gaussian distribution, and the measured coherence length is in excellent agreement with expectations.

Journal Article↗

Measurement of the spatial coherence function of undulator radiation using a phase mask.

A measurement of the horizontal coherence function of 7.9 keV radiation from an undulator beam line at the Advanced Photon Source is reported. X-ray diffraction from a phase-shifting mask was used, and the coherence function was measured as a function of the width of beam-conditioning slits in the beam line. The coherence distribution is found to be best described by a Lorentzian function.

Journal Article↗

X-ray speckle contrast variation across absorption edges.

We measured static x-ray speckle contrast variation with the incident photon energy across a sample-specific absorption edge. In this paper, we present a theoretical description of this energy dependency consistent with our data. We found that the contrast depends mainly on the imaginary part of the complex index of refraction in the sample, as well as on the instrumental resolution. The speckle contrast decreases as the absorption cross section in the sample increases at the absorption edge. This result is not predicted by commonly used theory.

Journal Article↗

Illumination for coherent soft X-ray applications: the new X1A beamline at the NSLS.

The X1A soft X-ray undulator beamline at the NSLS has been rebuilt to serve two microscopy stations operating simultaneously. Separate spherical-grating monochromators provide the resolving power required for XANES spectroscopy at the C, N and O absorption edges. The exit slits are fixed and define the coherent source for the experiments. The optical design and the operational performance are described.

Journal Article↗

Small-angle X-ray scattering using coherent undulator radiation at the ESRF.

A simple approach for producing a high-coherent-flux X-ray beam for small-angle-scattering studies used at the Troika beamline of the European Synchrotron Radiation Facility is reported. For such small-angle studies it is permissible to reduce the longitudinal coherence .length of the beam, thus increasing the energy bandpass and intensity of the beam, because there is only a small optical path-length difference. By using mirrors and filters to cut unwanted energies from the undulator harmonic structure, a high-flux beam of >10(9) photons s(-1) through a 5 micron-diameter pinhole at 8.2 keV with a bandpass of 1.3% can be produced. The coherent properties of this beam have been measured by analyzing a static speckle pattern from an aerogel sample imaged by a directly illuminated CCD camera. The speckle size and contrast are compared with the expected values based on a statistical analysis of the intensity distribution of speckle patterns obtained using partially coherent conditions. The expected widths of the spatial autocorrelation are found, but there is an apparent incoherent fraction of the beam which reduces the measured contrast. The method presented is to be used as a tool to optimize conditions for diffraction experiments using coherent X-rays.

Journal Article↗

The interior of a whole and unmodified biological object--the zymogen granule--viewed with a high-resolution X-ray microscope.

We report the ability of focused soft X-rays to visualize at spatial resolution well beyond that of the optical microscope (less than 100 nm) the interior of a small, whole biological object without fixation, staining, dehydration or sectioning. Quantitative estimation of its protein content with unique femtogram sensitivity is also reported. The present results represent a significant step towards the goals of natural imaging and chemical mapping of biological structures with soft X-rays.

Animals↗