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H Nikaido

Publications and source records attributed to H Nikaido.

At least 217 records · Page 12Linked to original sources
PubMed1977

Outer membrane of Salmonella typhimurium. Identification of proteins exposed on cell surface.

Proteins exposed on the outer surface of the outer membrane of Salmonella typhimurium were identified by reacting intact cells with a covalent labeling reagent. Since the outer membrane permitted the free diffusion of small hydrophilic molecules, we used a macromolecular reagent, CNBr-activated dextran, as the non-penetrating labeling agent. We also used a mutant producing a lipopolysaccharide with a very short (i.e. hexasaccharide) carbohydrate chain, in order to avoid steric hindrance by the carbohydrates on membrane surface. Results showed that out of the four "major" proteins of molecular weight around 35 000, three were exposed, and that at least six other proteins were also exposed on cell surface. Only two or three outer membrane proteins consistently did not react with the reagent in intact cells.

Biological Transport↗
PubMed1976

Outer membrane of Salmonella typhimurium: accessibility of phospholipid head groups to phospholipase c and cyanogen bromide activated dextran in the external medium.

Whole cells of Salmonella typhimurium were treated with Bacillus cereus phospholipase C or with CNBr-activated dextran. If phosphatidylethanolamine head groups are exposed and accessible on the outer surface of the outer membrane of these cells, it was expected that these groups would be hydrolyzed by the former agent, and become covalently coupled to the latter agent. With strains producing lipopolysaccharides of S or Rc type, results did not indicate the presence of any accessible head groups on the outer surface. In contrast, with strains that produce outer membranes containing less complete lipopolysaccharides (Rd or Re type) and reduced amounts of proteins, both methods clearly showed the presence of exposed phosphatidylethanolamine head groups. These data can be most easily explained by assuming that the outer membranes of S and Rc strains either contains all phospholipid molecules in its inner leaflet or has proteins that completely cover up the head groups at its outer surface. In either model, the reduction in the amount of outer membrane proteins in Rd or Re mutants would produce membranes with exposed phospholipid head groups. CNBr-activated dextran can be easily prepared, and reacts with high efficiency under near-physiological conditions. Its additional advantage as a nonpenetrating membrane-labeling reagent is that we can be quite confident on its impermeability because of its size, in contrast, with most other reagents whose presumed impermeability is dependent only on the presence of charged groups.

Bacillus cereus↗
PubMed1976

Outer membrane of Salmonella typhimurium. Transmembrane diffusion of some hydrophobic substances.

The outer membrane, which is composed of lipopolysaccharide, phospholipids, and proteins, is a layer of the cell wall of Gram-negative bacteria, and apparently acts as a penetration barrier for various substances. It had been shown by other workers that "deep rough" mutants of Salmonella typhimurium, whose lipopolysaccharides lack most of the saccharide chains, were much more sensitive than the wild type strain to certain antibiotics and dyes, but not to others. We found that the former group of agents are usually hydrophobic and the latter group mostly hydrophilic. All hydrophilic antibiotics had molecular weights lower than 650, and one of them was shown to diffuse through the outer membrane of 0 degrees C. In contrast, some hydrophobic antibiotics had molecular weights in excess of 1200, and the rate of diffusion of one of them was shown to be extremely dependent both on temperature and on the structure of lipopolysaccharide present. These data and results presented elsewhere suggest, but do not necessarily prove, that most hydrophilic antibiotics diffuse through aqueous pores, whereas hydrophobic antibiotics and dyes mainly penetrate by dissolving into the hydrocarbon interior of the out membrane. In contrast to the outer membrane of deep rough mutants, that of the wild type strain and less defective rough mutants was unusual among biological membranes in that it was practically impermeable to hydrophiobic agents. It is proposed that the difference in hydrophobic permeability between the two types of strains is due to radical differences in the organization of the outer membrane, more specifically to the presence or absence of exposed phospholipid bilayer regions.

Anti-Bacterial Agents↗
PubMed1976

Enterobacterial common antigen in rfb deletion mutants of Salmonella typhimurium.

The his-rfb deletion series of Salmonella typhimurium mutants characterized previously by Nikaido et al. was examined for the presence of the enterobacterial common antigen (ECA). All deletions not extending further to the left than the genes for cytidine phosphoabequose synthesis were ECA positive, whereas longer deletions (extending to the genes for thymidine diphosphorhamnose synthesis or further) were ECA negative. When these long-his-rfb deletion strains were studied further, it became clear that they (four out of four studied) had accumulated a second mutation, called rff, close to ilv, which prevented the synthesis of ECA. When rff- was replaced by rff+, the recombinants, now having the his-rfb deletion only, produced traces of ECA, showed reduced viability, increased sensitivity to sodium dodecyl sulfate (SDS) and to a lesser extent, to other anionic detergents, and accumulated secondary "suppressor" mutations upon storage. Such suppressor-containing mutants could be isolated by selecting for resistance to 1% SDS. Thirty of 46 SDS-resistant mutants studied had a second mutation, which alone prevented the synthesis of ECA, close to ilv. This ilv-linked mutation was similar to the rff mutation of the strains studied originally. The new rff mutation was similar to previously described rfe mutations in its close linkage to ilv and association with an ECA-negative phenotype. It differed from rfe, however, by not affecting the synthesis of the O antigens (O-6,7) of group C1. In Salmonella group C1, all ECA genes identified thus far are linked to ilv (rfe and/or rff) and none is linked to rfb.

Antigens, Bacterial↗
PubMed1976

Outer membrane of gram-negative bacteria. XII. Molecular-sieving function of cell wall.

The permeability function the cell wall of gram-negative bacteria such as Salmoenlla was investigated by producing cells with an expanded periplasmic volume, and incubating them with radioactive non-utilizable oligo- and polysaccharides or polyethylene glycols. To quantitative the extent of penetration of these hydrophilic compounds into the periplasm, the radioactivity of the cell pellet was determined after centrifugation. We found that only di- and trisaccharides could fully diffuse into the periplasm, whereas higher-molecular-weight saccharides were nonpenetrable. In addition, low-molecular-weight polyethylene glycols rapidly diffused across the cell wall. Kinetics experiments also showed that both sucrose and raffinose in the periplasm exchanged rapidly with sugars in the medium, even at 0 degrees C. These results suggest that the cell wall acts as a molecular sieve, with an exclusion limit near 550 to 650 daltons for saccharides. We also suggest that the diffusion of these hydrophilic compounds most likely occurs through water-filled pores present in the cell wall of gram-negative bacteria.

Alcaligenes↗
PubMed1975

Outer membrane as a diffusion barrier in Salmonella typhimurium. Penetration of oligo- and polysaccharides into isolated outer membrane vesicles and cells with degraded peptidoglycan layer.

In Escherichia coli and Salmonella typhimurium, the cell wall that contains both the outer membrane layer and the peptidoglycan layer acts as a barrier of the molecular sieve type for the penetration of uncharged saccharides (G. Decad, T. Nakae, and H. Nikaido (1974) Fed. Proc. 33, 1240). Here we examined which of the layers of the cell wall limited the size of the penetrating molecules, by studying the penetration of saccharides into (a) cells whose peptidoglycan layer had been destroyed by lysozyme treatment or growth in the presence of penicillin and (b) isolated outer membrane vesicles. We found that peptidoglycan-defective cells were similar to intact, plasmolyzed cells in that they allowed a partial penetration of stachyose (molecular weight 666), but essentially excluded saccharides with molecular weights higher than 900 to 1000. We also found that the isolated outer membrane acted as a penetration barrier for saccharides. These observations led us to conclude that the outer membrane, rather than peptidoglycan, sets the size limit for the penetration of uncharged, hydrophilic molecules through the E. coli or S. typhimurium cell wall. The isolated outer membrane, however, had an exclusion limit much higher than that found in intact cells. This "leakiness" could be decreased either by the use of mutants producing extremely deficient lipopolysaccharide, or by trypsin treatment of the isolated membrane followed by heating and slow cooling in the presence of Mg2+. We feel that these observations are consistent with the hypothesis that the resealing of the ruptured outer membrane during the isolation procedure is often incomplete, and that cracks and holes thus generated are responsible for the "leakiness" of the isolated membrane vesicles.

Biological Transport↗
PubMed1975

Outer membrane of Salmonella typhimurium: chemical analysis and freeze-fracture studies with lipopolysaccharide mutants.

The outer membrane layer of the cell wall was isolated from wild-type Salmonella typhimurium LT2 as well as from its mutants producing lipopolysaccharides with shorter saccharide chains. Chemical analysis of these preparations indicated the following. (i) The number of lipopolysaccharide molecules per unit area was constant, regardless of the length of the saccharide side chain in lipopolysaccharide. (ii) In contrast, in "deep rough" (Rd or Re) mutants producing the lipopolysaccharides with very short saccharide chains, the amount of outer membrane protein per unit surface area decreased to about 60% of the value in the wild type. (iii) In the wild type, the amount of phospholipids is slightly less than what is needed to cover one side of the membrane as a monolayer. In comparison with the wild type, the outer membrane of Rd and Re mutants contains about 70% more phospholipids, which therefore must be distributed in both the outer and inner leaflets of the membrane. Freeze-fracture studies showed that the outer membrane of Re mutants were easily fractured, but fracture became increasingly difficult in strains producing lipopolysaccharides with longer side chains. The convex fracture face was always nearly smooth, but the concave fracture face or the outer half of the membrane was densely covered with particles 8 to 10 nm in diameter. The density of particles was decreased in Re mutants to the same extent as the reduction in proteins, suggesting the largely proteinaceous nature of particles. A model for the supramolecular structure of the outer membrane is presented on the basis of these and other results.

Bacterial Proteins↗
PubMed1974

Protein composition of the outer membrane of Salmonella typhimurium: effect of lipopolysaccharide mutations.

The protein composition of the outer membrane of Salmonella typhimurium has been analyzed by electrophoresis on slabs of sodium dodecyl sulfate-acrylamide gel. This powerful technique allows very high resolution of protein mixtures and has permitted the identification of multiple major protein components of the outer membrane; no evidence for a single major component of molecular weight 44,000 was obtained. These proteins were shown to be decreased in amount in mutants which have defective lipopolysaccharides. Mutants of an apparently new type were also found which contain decreased amounts of the proteins and the parent-like lipopolysaccharide, yet are resistant to a lipopolysaccharide-specific phage, C21. Several outer membrane proteins are insoluble in sodium dodecyl sulfate unless heated at high temperature (above 70 C). A purification procedure based on this property is tentatively suggested.

Bacterial Proteins↗
PubMed1973

Structure of cell wall lipopolysaccharide from Salmonella typhimurium. IV. Anomeric configuration of L-rhamnose residues and its taxonomic implications.

A major portion of cell wall lipopolysaccharide from group A, group B, or group D(1)Salmonella corresponds to a linear polysaccharide chain, which consists of alpha-d-galactosyl-(1 --> 2)-alpha-d-mannosyl-(1 --> 4)-l-rhamnosyl-(1 --> 3)-repeating units, and has short branches of single 3,6-dideoxyhexose residues. The groups differ in the configuration of the 3,6-dideoxyhexose present. Furthermore, it has been claimed that the anomeric configuration of the rhamnosyl residues is beta-l in group B, in contrast to the alpha-l configuration found in groups A and D(1). In this study, oligosaccharides containing more than one repeating unit were isolated from a lipopolysaccharide of a group B Salmonella, and the anomeric configuration of the rhamnosyl residues was determined by the comparison of optical rotatory powers of these oligosaccharides with that of the repeating unit trisaccharide. The results established the configuration of rhamnose as alpha-l, in contrast to the beta-l configuration suggested in the literature. Since rhamnosyl linkages in lipopolysaccharide of a group D(1)Salmonella are hydrolyzed in acid at exactly the same rate as are those in group B Salmonella, the configuration of rhamnose residues in groups D(1) lipopolysaccharide is also likely to be alpha-l. These results indicate that lipopolysaccharides of Salmonella groups A, B, and D(1) share an identical main chain polysaccharide and differ essentially only in the configuration of 3,6-dideoxyhexose branches; they thus suggest close evolutionary relationship between these three serogroups of Salmonella.

Carbon Isotopes↗