Chromosomal localization of alpha-galactosyltransferase 1 (GGTA1) and elongation factor 2 (EEF2) genes in river buffalo by FISH.
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Biomedical subjects
Publications and source records attributed to H Hayes.
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In swine, distinct centromeric satellite DNA families have been described that correspond to either all the metacentric chromosomes except the Y (Mc1) or all the acrocentric chromosomes (Ac2). Using primed in situ (PRINS) labeling, we show here that primers derived from various sequences specifically label the centromeres of different subgroups of chromosomes. Among five primers derived from centromeric sequences of acrocentric chromosomes reported to be very homogeneous, four recognize all the acrocentric chromosomes, whereas one labels prominently chromosome 17. For the metacentric chromosomes, six primers have been derived from several divergent sequences. Among these primers, two recognize all the metacentric chromosomes except 5, 10, and 12. Three other primers label small subsets of metacentric chromosomes, including the X and one or two additional chromosomes. The last primer is specific to chromosome 1. These preliminary results suggest that it should be possible to define specific primers for almost every swine chromosome. Already, some of the primers reported here permit a distinction between swine chromosomes difficult to differentiate without banding, such as the X chromosome and chromosome 9. Therefore, the PRINS technique using centromeric motifs constitutes an additional tool for cytogenetic studies in swine.
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The karyotype of the addax (Addax nasomaculatus, 2n = 58) has been investigated by RBG and CBG banding techniques. All chromosomes are acrocentric except the first pair of autosomes, which is submetacentric. The X chromosome is the largest acrocentric, and the Y chromosome is a medium sized acrocentric. According to the standard conventions used for cattle and goat, p- and q-arms of the pair of submetacentric autosomes correspond, respectively, to chromosomes # 27 # 1. The comparison of banding patterns of chromosomes in addax and four other species of the subfamily Hippotraginae reveals several common features and a high degree of homoeology with caprine and bovine karyotypes.
The six following genes: zinc finger proteins 164 (ZNF164) and 146 (ZNF146), alpha-galactosyltransferase 1 (GGTA1), SRY-related HMG-box 2 (SOX2), prolactin receptor (PRLR) and elongatin factor 2 (EEF2) have been localized by fluorescent in situ hybridization respectively on bovine and caprine chromosomes 17, 18, 11, 1, 20 and 7 and on sheep chromosomes 17, 14, 3, 1, 16, and 5. The comparison of the results with the localization of these genes in man (except for ZNF164) confirm the correspondences between human and bovine chromosomes established from heterologous chromosome painting data.
A clone carrying an open reading frame coding for a novel zinc finger protein of the Krüppel family was isolated from a bovine genomic library and designated ZNF 164 (zinc finger protein 164). Partial sequencing revealed that it contained at least 13 zinc finger motifs preceded by a lysine-rich region of 60 amino acids. The ZNF164 protein shared approximately 60% similarity with several zinc finger proteins but did not appear to be orthologous with a previously identified gene. Using fluorescence in situ hybridization, the ZNF164 gene was mapped to bovine chromosome band 17q24.
The RBG banded karyotype (2n = 38) of the blesbok (Damaliscus dorcas phillipsi) comprises 8 pairs of metacentric, 3 pairs of submetacentric and 7 pairs of acrocentric autosomes. The X and Y chromosomes are acrocentric. The 11 pairs of biarmed chromosomes correspond to Robertsonian translocations involving the chromosomes equivalent to goat and cattle chromosomes: 1;10, 4;5, 8;17, 7;9, 6;14, 13;15, 12;16, 20;22, 3;19, 2;27 and 11;23. The comparison of Blesbok karyotype with that of other species of Alcelaphinae and Hippotraginae reveals a high level of homoeology.
Commercially available human chromosome-specific DNA libraries covering the whole karyotype were hybridized to normal bovine metaphase spreads to characterize the conserved chromosomal segments between man and cattle. All chromosome libraries except the Y chromosome library displayed a signal on at least part of one or more bovine chromosomes. The labeling was clearly visualized and permitted precise delineation of the hybridized bovine chromosomal segments. This study indicates that the reorganization of the genetic material between human and bovine genomes is not as great as expected from classical comparative cytogenetics based on banding patterns. However, apart from interchromosomal rearrangements between ancestral forms of human and bovine chromosomes, a majority of intrachromosomal rearrangements must have occurred in these species during evolution to explain the differences in the banding patterns of their chromosomes. These results show that chromosome painting with heterologous chromosome-specific DNA libraries can provide useful information in comparative studies on karyotypes and gene maps of distantly related mammalian species. The observations are discussed in relation to published data on gene mapping in man and cattle.
Karyotypes of five males and one female scimitar-horned oryx (Oryx dammah) were prepared using lymphocyte and skin cells. CBG-, GTG-, and RBG-banded chromosomes were analysed and the banding patterns were compared with those of cattle, revealing a high level of homoeology except for chromosomes 9, 14, 21, Y, and X. Standard karyotypes are proposed for the scimitar-horned oryx karyotype, which contains 58 chromosomes with one pair of large submetacentric autosomes and 27 acrocentric autosomal pairs. The X and Y chromosomes are the largest and smallest acrocentrics. The scimitar-horned oryx chromosome 1 is submetacentric and appears to result from the fusion between ancestral forms of bovid chromosomes numbered 1 and 29 according to the READING CONFERENCE (1980) nomenclature and to ISCNDA 89 if GTG-banding is used.
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Eighty 13-15-year-old children who failed to attend one of four schools for more than 40% of a term, without good reason, were studied. A systematic schedule (C.A.P.A.) was used in interviewing parents and children. Twenty-five had DSM-III-R Disruptive Behaviour Disorders and 15 had Anxiety/Mood Disorders. Truancy was associated with the former and school refusal with the latter but both often occurred without any Disorder. Fourteen children had neither school refusal nor truancy. Compared to controls, poor attenders came from materially disadvantaged homes. School refusal with anxiety disorders rarely received psychiatric treatment. Non-disturbed absentees were not usually dealt with appropriately.
The alpha-S2-casein gene (CASAS2) has been mapped to the homoeologous cattle, sheep, and goat chromosomes 4 and to the long arm of a bovine chromosome translocation, t(4;8), using nonradioactive in situ hybridization and simultaneous fluorescent R-banding. The t(4;8) has been characterized by GTG-, GBG-, and RBG-banding and by silver staining of nucleolus organizer regions. These results confirm the previous (ISCNDA, 1989) localization of the casein gene group to chromosome 4 of cattle, sheep, and goats. We propose that the discrepancy between our results and earlier assignments of the casein gene group to chromosome 6 of cattle and sheep can be explained by the fact that the chromosome identified as No. 6 in the Reading Conference (1976) report was renamed chromosome 4 in the ISCNDA (1989) standardized karyotype of both species.
The ovine beta-casein gene (CNS2) has been mapped to a specific chromosome band using nonradioactive in situ hybridization and simultaneous fluorescent R-banding. The probe pTZ-E4 was a fragment of the ovine beta-casein gene inserted in the plasmid pTZ18R and labeled with biotin-11-dUTP. It hybridized to band q32 of ovine chromosome 4. The discrepancy between this result and the previous localization of this gene on cattle chromosome 6 may be explained by the very great similarity of the banding patterns of ovine and bovine chromosomes 4 and 6.
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