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Biomedical subjects

F R Jackson

Publications and source records attributed to F R Jackson.

At least 37 records · Page 2Linked to original sources
PubMed1994

Altered circadian pacemaker functions and cyclic AMP rhythms in the Drosophila learning mutant dunce.

Neural circadian pacemakers can be reset by light, and the resetting mechanism may involve cyclic nucleotide second messengers. We have examined pacemaker resetting and free-running activity rhythms in Drosophila dunce (dnc) and DC0 mutants, which identify a cAMP specific phosphodiesterase and the catalytic subunit of cAMP-dependent protein kinase, respectively. dnc mutants exhibit augmented light-induced phase delays and shortened circadian periods, which indicate altered pacemaker function. Interestingly, however, light-induced phase advances are normal in dnc, suggesting a selective effect on one component of the pacemaker resetting response. Furthermore, we demonstrate the presence of circadian rhythms in cAMP content in head tissues and show that dnc mutations increase the amplitude of daily cAMP peaks. These results show that cAMP levels are not chronically elevated in the dnc mutant. A role for cAMP signaling in circadian processes is also suggested by an analysis of DC0 mutants, which have severe kinase deficits and display arrhythmic locomotor activity.

3',5'-Cyclic-AMP Phosphodiesterases↗
PubMed1993

A new biological rhythm mutant of Drosophila melanogaster that identifies a gene with an essential embryonic function.

To identify components of a circadian pacemaker output pathway, we have sought Drosophila mutations that alter the timing of eclosion but do not perturb circadian period or the expression of the activity rhythm. A mutant named lark has been identified, for which daily peaks of eclosion occur abnormally early while populations are synchronized to either light/dark or temperature cycles. The temporal phasing of locomotor activity in lark mutants, however, is entirely normal, as is the free-running period of the circadian pacemaker. The lark strain carries a single P-element insertion which, interestingly, has a dominant effect on the timing of eclosion, but is also associated with a recessive embryonic lethal phenotype. The analysis of excision-generated alleles suggests that the lark gene encodes an essential function. This function is apparently mediated by a transcription unit that is interrupted by the P-induced lark mutation. A combination of in situ hybridization analysis and reporter (beta-gal) staining indicates that this transcription unit expresses mRNAs throughout the embryonic central nervous system and in a defined subset of cells in the nervous system of pharate adults. RNAs are first detected at about embryonic stage 11, just prior to the stage at which lethality occurs in lark homozygotes. Based primarily on the observed mutant phenotypes, a function is proposed for the LARK product(s) that is consistent with the pleiotropic nature of lark mutations.

Alleles↗
PubMed1993

Transcriptional organization of a Drosophila glutamic acid decarboxylase gene.

We previously described the sequence and expression pattern of a Drosophila mRMA (Gad) that encodes the major soluble form of glutamic acid decarboxylase (GAD). We now report the transcriptional organization of the Drosophila Gad gene. Based on a combination of DNA sequence, RNase protection, primer extension, and polymerase chain reaction analyses, we conclude that the transcription unit for a 3.1-kb Gad mRNA is composed of eight exons that span approximately 17-kb genomic interval. By this analysis, the site of Gad transcript initiation overlaps with a recognition sequence that confers binding of the zeste transcription factor to other promoter elements. We emphasize that our analysis of the Gad transcription unit provides no evidence for alternative RNA splicing as a mechanism for the generation of GAD isoforms. Thus, the several GAD-immunoreactive proteins (putative GAD isoforms) that can be detected in Drosophila extracts are probably encoded by distinct genes.

Animals↗
PubMed1992

A superfamily of Drosophila satellite related (SR) DNA repeats restricted to the X chromosome euchromatin.

The 1.688 g/cm3 class of Drosophila satellite DNA is predominantly localized to the centromeric heterochromatin of the X chromosome. We report here the existence of 1.688 satellite related (SR) DNA arrays present at numerous locations throughout the euchromatic portion of the X. Unlike their heterochromatic counterparts, euchromatic SRs consist of a small number of repeating units (usually 2-4), each of which is 63-81% identical to the 359-bp monomer of the 1.688 satellite. Although it appears that SR DNA arrays are not transcribed, in at least two cases, they are located adjacent to transcriptionally active genes. SR sequences also have significant similarity to a previously described Drosophila middle repeat found almost exclusively in the X euchromatin. It seems likely that these X linked sequences are required for sex chromosome specific functions.

Animals↗
PubMed1991

Mutational analysis of the Drosophila miniature-dusky (m-dy) locus: effects on cell size and circadian rhythms.

A mutational analysis has been performed to explore the function of the Drosophila melanogaster miniature-dusky (m-dy) locus. Mutations at this locus affect wing development, fertility and behavior. The genetic characterization of 13 different mutations suggests that m and dy variants are alleles of a single complex gene. All of these mutations alter wing size, apparently by reducing the volume of individual epidermal cells of the developing wing. In m mutants, epidermal cell boundaries persist in the mature wing, whereas they normally degenerate 1-2 hr after eclosion in wild-type or dy flies. This has permitted the direct visualization of cell size differences among several m mutants. Mutations at the m-dy locus also affect behavioral processes. Three out of nine dy alleles (dyn1, dyn3 and dyn4) lengthen the circadian period of the activity and eclosion rhythms by approximately 1.5 hr. In contrast, m mutants have normal circadian periods, but an abnormally large percentage of individuals express aperiodic bouts of activity. These behavior genetic studies also indicate that an existing "rhythm" mutation known as Andante is an allele of the m-dy locus. The differential effects of certain m-dy mutations on wing and behavioral phenotypes suggest that separable domains of function exist within this locus.

Alleles↗
PubMed1991

Drosophila ebony mutants have altered circadian activity rhythms but normal eclosion rhythms.

Drosophila ebony mutants exhibit a syndrome of morphological and behavioral phenotypes that include an abnormally dark body color and defects in visual and courtship responses. We now show that mutants carrying any one of five ebony alleles display complex and variable locomotor activity rhythms. Although in the most extreme cases activity is essentially aperiodic, many individuals express short- and/or long-period activity components. Three different ebony mutants (e, e1, and e11) express free-running rhythmicity in a temperature-dependent manner; activity rhythms are robust at 28 degrees C, but weak or absent at 20 degrees C. Even while maintained in a light-dark (LD) cycle, ebony homozygotes characteristically display extremely disorganized patterns of activity; some individuals entrain with an apparently abnormal phase and/or express multiple rhythmic components. Interestingly, the visual system mutation norpA partially suppresses effects of the e1 allele, which suggests that aberrant visual system inputs might contribute to the rhythm deficits of ebony mutants. In contrast to their effects on the locomotor activity rhythm, ebony mutations have no apparent impact on the circadian rhythm of adult eclosion, and thus exert rhythm-specific effects on circadian periodicity.

Activity Cycles↗
PubMed1990

Prokaryotic and eukaryotic pyridoxal-dependent decarboxylases are homologous.

A database search has revealed significant and extensive sequence similarities among prokaryotic and eukaryotic pyridoxal phosphate (PLP)-dependent decarboxylases, including Drosophila glutamic acid decarboxylase (GAD) and bacterial histidine decarboxylase (HDC). Based on these findings, the sequences of seven PLP-dependent decarboxylases from five different organisms have been aligned to derive a consensus sequence for this family of enzymes. In addition, quantitative methods have been employed to calculate the relative evolutionary distances between pairs of the decarboxylases comprising this family. The multiple sequence analysis together with the quantitative results strongly suggest an ancient and common origin for all PLP-dependent decarboxylases. This analysis also indicates that prokaryotic and eukaryotic HDC activities evolved independently. Finally, a sensitive search algorithm (PROFILE) was unable to detect additional members of this decarboxylase family in protein sequence databases.

Amino Acid Sequence↗
PubMed1990

Drosophila GABAergic systems: sequence and expression of glutamic acid decarboxylase.

A mammalian glutamic acid decarboxylase (GAD) cDNA probe has been utilized to isolate Drosophila cDNA clones that represent a genomic locus in chromosome region 64A. Deletion analysis indicates that this chromosomal locus encodes an enzymatically active GAD protein. The in vitro translation of cRNA representing a Drosophila cDNA clone yields a 57-kDa protein that can be immunoprecipitated by an anti-GAD antiserum. A GAD-immunoreactive protein of the same size can also be detected in Drosophila head extracts. The nucleotide sequence derived from two overlapping Drosophila cDNA clones predicts a 57,759-dalton protein composed of 510 residues that is 53% identical to mammalian GAD. Sequence comparisons of mammalian and Drosophila GAD identify two highly conserved regions (greater than or equal to 70% identity), one of which encompasses a putative co-factor-binding domain. Transcriptional analyses show that expression of the Drosophila Gad gene commences early in embryonic development (4-8 h) and continues in all later developmental stages. A 3.1-kb class of mRNA is detected throughout embryogenesis, in all three larval stages, in pupae, and in adults. This transcript class has a widespread distribution in the adult CNS. A smaller 2.6-kb transcript is expressed in a developmentally regulated manner; it is detected only in embryos and pupae.

Amino Acid Sequence↗
PubMed1988

Measurement of natural killer cell cytotoxicity by area under a cytotoxic curve. A method suitable for rheumatoid arthritis.

Calculation of the area under a curve derived from a 51Cr cellular release assay gives a reproducible expression of cellular cytotoxicity and correlates well with results at fixed lymphocyte-to-target cell ratios and with lytic units at 20% and 30% cytotoxicity. This method is suitable for quantifying the low cytotoxicity seen in rheumatoid arthritis. The area under the cellular cytotoxic curve may be calculated using a simple mathematical formula or by computer analysis.

Arthritis, Rheumatoid↗
PubMed1988

Cloning, sequence, and expression of the Drosophila cAMP-dependent protein kinase catalytic subunit gene.

Genomic DNA containing the protein coding region for Drosophila cAMP-dependent protein kinase catalytic subunit has been cloned and sequenced. The probe used to detect and isolate the gene fragment was constructed from two partially complementary synthetic oligonucleotides and contains 60 base pairs that encode (using Drosophila codon preferences) amino acids 195-214 of the beef heart catalytic subunit. In reduced stringency hybridization conditions, the probe recognizes two target sites in fly genomic DNA with 85% homology. One of these sites is in the cAMP-dependent protein kinase catalytic subunit gene, which was isolated as a 3959-base pair HindIII fragment. This fragment contains all of the protein coding portion, 900 base pairs upstream of the initiator ATG, and 2000 base pairs downstream of the termination codon (TAG). The coding portion of the gene contains no introns and yields a protein of 352 amino acids. There is a 2-amino acid insertion near the N terminus of the fly protein relative to the beef and mouse enzymes. Of the remaining 350 amino acids, 273 are invariant in the three species. A probe derived from the coding sequence of the HindIII clone hybridizes strongly to a 5100-base poly(A)+ RNA and weakly to 4100- and 3400-base poly(A)+ RNAs expressed in adult flies. A 2100-base pair EcoRI genomic fragment containing the second site recognized by the 60-base pair probe has also been cloned. DNA sequence analysis demonstrates that this fragment is part of the cGMP-dependent protein kinase gene or a close homolog. The catalytic subunit gene and the cGMP-dependent protein kinase gene have been located in regions 30C and 21D, respectively, of chromosome 2.

Amino Acid Sequence↗
PubMed1986

The tip-E mutation of Drosophila decreases saxitoxin binding and interacts with other mutations affecting nerve membrane excitability.

A recessive temperature-sensitive paralytic mutation, tip-E, is associated with reduced binding of [3H]saxitoxin to voltage-sensitive sodium channels in membranes from adult Drosophila heads. There is a decrease of 30-40% in the number of [3H]saxitoxin-binding sites per mg protein (Bmax), but the dissociation constant (Kd) for [3H]saxitoxin binding is normal in the remaining population of binding sites. This decrease is not due to a general hypotrophy of neural tissue since the number of alpha-bungarotoxin binding sites is normal in tip-E mutants. Although saxitoxin binding is reduced in vitro, pharmacological experiments suggest that tip-E mutants have close to the wild-type number of sodium channels in vivo. This suggestion is supported by the observation that at permissive temperatures tip-E only marginally suppresses a mutation which causes enhanced membrane excitability. However, even at permissive temperatures tip-E interacts synergistically with mutations that decrease membrane excitability. In this case, the double mutants exhibit reduced viability and/or longevity. We postulate that either the structure of sodium channels or their microenvironment is altered in tip-E mutants resulting in an increased liability of binding sites in vitro.

Amphibian Proteins↗
PubMed1985

A biological clock in Drosophila.

The per locus plays a central role in the organization and function of the Drosophila biological clock. The gene has been mapped to a 7-kb DNA segment by physically locating the breakpoints of several chromosomal rearrangements that disrupt per function. This DNA contains a single transcription unit which produces a 4.5-kb poly(A)+ RNA. No oscillation in the synthesis of this transcript is detected when per expression is followed over a 24-hour cycle of light and dark. When wild-type DNA containing only this transcription unit is transferred to the genome of a per0 (arrhythmic) fly by P-element-mediated transformation, the 4.5-kb RNA is produced and rhythmic behavior is restored with high penetrance of the rhythmic phenotype. This transforming DNA will also complement chromosomal deletions that include the per locus and adjoining transcription units, indicating that only one gene in this chromosomal interval plays a measureable role in the production of circadian rhythms. Transformed flies having rhythms with longer than wild-type periodicity underproduce the 4.5-kb RNA. We suggest that the periodicity of circadian rhythms in Drosophila is determined by the level of expression of a per locus protein encoded by the 4.5-kb transcript. We have found DNA homologous to the per locus in several species of vertebrates. DNA exhibiting very high homology to a portion of the per locus has been cloned from the mouse and the DNA sequence of the conserved segment has been determined. Mouse and fly DNAs both appear to code for long protein segments composed exclusively of alternating threonine and glycine or serine and glycine residues.

Animals↗
PubMed1985

Genetic modifications of voltage-sensitive sodium channels in Drosophila: gene dosage studies of the seizure locus.

We have identified a genetic locus in Drosophila melanogaster whose product appears to have a structural role in the formation of functional voltage-sensitive sodium channels. This locus, designated seizure, is defined by two temperature-sensitive alleles (seits-1 and seits-2), each of which causes convulsive seizures followed by a rapid but reversible paralysis of adults at restrictive temperatures above 38 degrees C. Previous work had shown that seits-2 extracts display an altered pH dependence and an abnormally high Kd for [3H]-saxitoxin binding at high temperatures, suggesting that sodium channels in seits-2 mutants have an altered structure (Jackson F. R., S. D. Wilson, G. R. Strichartz, and L. M. Hall (1984) Nature 308: 189-191). These binding studies have now been extended to extracts of seits-1 which have a Kd not significantly different from wild-type at all assay temperatures. However, seits-1 extracts show a reduced number of saxitoxin binding sites (Bmax) relative to wild-type. This reduction is only 5 to 18% at 0 degree C but is 17 to 37% at 39 degrees C, suggesting that under certain conditions sodium channels in the seits-1 mutant are more labile than those of wild-type. Cytogenetic studies demonstrate that the seizure locus maps within region 60A to 60B8-10 on the second chromosome. Gene dosage analysis of approximately 99.7% of the genome, including this second chromosome region, failed to detect a wild-type locus whose dose affected saxitoxin-binding activity. Nevertheless, the mutant seits-2 allele has codominant and dose-dependent effects on paralytic behavior and saxitoxin-binding activity.(ABSTRACT TRUNCATED AT 250 WORDS)

Animals↗
PubMed1983

The isolation of biological rhythm mutations on the autosomes of Drosophila melanogaster.

A selection for autosomal circadian rhythm variants in Drosophila melanogaster resulted in the isolation of 3 new mutants, all of which display an abnormal synchronization of daily rhythms to entraining environmental cycles. In populations of phase-angle-2 (psi-2) and phase-angle-3 (psi-3) mutants, daily peaks of adult emergence are hours earlier than normal when the strains are entrained to cycles of either light and dark or high and low temperature. Like an early-emerging strain previously isolated in Drosophila pseudoobscura, the psi strains have slightly lengthened periods for the circadian rhythm in adult emergence. In addition, psi-2 brings about an abnormal synchronization of locomotor activity to light-dark cycles and lengthens periods for the activity rhythm. The emergence of adults in a third mutant strain designated gat is poorly synchronized becoming aperiodic in conditions of continuous darkness and constant temperature.

Animals↗
PubMed1981

Thermal injury of the colon due to colostomy irrigation.

A case of thermal burn and stricture of the colon following colostomy irrigation with hot water is described. The initial radiographic features on barium enema simulated nonspecific segmental colitis. Colonic stricture and enterolith formation developed subsequently. This case emphasizes that care should be taken in preparing irrigating and barium enema solutions.

Aged↗