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Biomedical subjects

F Chen

Publications and source records attributed to F Chen.

At least 109 records · Page 6Linked to original sources
PubMed2001

Aggressive neoplastic plasma cell growth with MLL gene rearrangement after high-dose therapy with autologous stem cell support for multiple myeloma.

We report a case of a patient with IgA kappa multiple myeloma (MM) mobilized with etoposide and subsequently receiving high-dose melphalan (HDM) with stem cell support. She relapsed rapidly post transplantation. Southern blot and fluorescent in situ hybridization analysis showed MLL gene rearrangement in the myeloma cells, which was not detected in the sample at diagnosis or in the PBSC harvested with etoposide plus G-CSF. These observations suggest that clonal rearrangement of the MLL gene is caused by etoposide. Patients with MM undergoing HDM with stem cell rescue may be at an increased risk of not only secondary leukemia, but also secondary genetic abnormalities in myeloma cells, especially those receiving priming with etoposide for peripheral blood stem cell collection.

Antineoplastic Agents, Phytogenic↗
PubMed2001

Caspase cleavage of vimentin disrupts intermediate filaments and promotes apoptosis.

Caspases are key mediators of apoptosis. Using a novel expression cloning strategy we recently developed to identify cDNAs encoding caspase substrates, we isolated the intermediate filament protein vimentin as a caspase substrate. Vimentin is preferentially cleaved by multiple caspases at distinct sites in vitro, including Asp85 by caspases-3 and -7 and Asp259 by caspase-6, to yield multiple proteolytic fragments. Vimentin is rapidly proteolyzed by multiple caspases into similar sized fragments during apoptosis induced by many stimuli. Caspase cleavage of vimentin disrupts its cytoplasmic network of intermediate filaments and coincides temporally with nuclear fragmentation. Moreover, caspase proteolysis of vimentin at Asp85 generates a pro-apoptotic amino-terminal fragment whose ability to induce apoptosis is dependent on caspases. Taken together, our findings suggest that caspase proteolysis of vimentin promotes apoptosis by dismantling intermediate filaments and by amplifying the cell death signal via a pro-apoptotic cleavage product.

Apoptosis↗
PubMed2001

Eicosapentaenoic and docosahexaenoic acids production by and okara-utilizing potential of thraustochytrids.

Nine thraustochytrid strains isolated from subtropical mangroves were screened for their eicosapentaenoic acid (EPA) and docosahexaenoic acid (DHA) production potential in a glucose yeast extract medium. Their ability to utilize okara (soymilk residue) for growth and EPA and DHA production was also evaluated. EPA yield was low in most strains, while DHA level was high on glucose yeast extract medium, producing 28.1-41.1% of total fatty acids, for all strains, with the exception of Ulkenia sp. KF13. The DHA yield of Schizochytrium mangrovei strains ranged from 747.7 to 2778.9 mg/l after 52 h of fermentation at 25 degrees C. All strains utilized okara as a substrate for growth, but DHA yield was lower when compared with fermentation in a glucose yeast extract medium.

Animals↗
PubMed2001

Quantum/classical studies of photodissociation and reaction dynamics in clusters.

In this paper, a multiple configurational time-dependent self-consistent field (TDSCF) approach for studying photodissociation and reaction dynamics is described. This approach has been applied to studies of several benchmark systems and is found to provide an accurate description of the reactions. The focus of the present work is on investigations of processes in cluster environments. Specifically, the dynamics of the O(3P) + HCl reaction and H2O photodissociation dynamics in isolation and in Van der Waals complexes with one argon atom are compared. The nature and importance of quantum mechanical effects in these systems are investigated through an analysis of the results of the quantum/classical simulations and a comparison of these results with those obtained from previously reported experimental and classical studies on these systems. It is found that, although the effects of complexation are subtle, they are not negligible. In addition, most of them can be understood in terms of kinematic and steric factors, although electronic effects cannot be dismissed.

Journal Article↗
PubMed2001

Cyclodextrin derivative-coated quartz crystal microbalances for alcohol sensing and application as methanol sensors.

Three novel cyclodextrin derivatives, mono(6-benzylimino-6-deoxy)-beta-cyclodextrin (2), mono-(6-cyclohexylamino-6-deoxy)-beta-cyclodextrin (3) and mono(6-benzylamino-6-deoxy)-beta-cyclodextrin (4), together with mono(6-phenylamino-6-deoxy)-beta-cyclodextrin (1), were synthesized and employed as sensing materials coated on quartz crystal microbalances (QCMs). Comparison of the responses to some alcohol and solvent vapours such as methanol, ethanol, propan-1-ol, propan-2-ol, butan-1-ol, acetone, chloroform and benzene indicated that these beta-cyclodextrin derivatives show considerable sensitivity and selectivity towards methanol. It shows a good linear relationship between the frequency shift and the methanol concentration in the range 3-160 mg L(-1) for 2-4 and 3-140 mg L(-1) for 1. The correlation coefficients are 0.9971, 0.9983, 0.9973 and 0.9977, respectively. The limit of detection (LOD) is 0.2 mg L(-1). When small amounts of other vapours co-exist, e.g., ethanol, propan-1-ol and acetone, the responses differ from that of pure methanol vapour, and a deduction method could eliminate this cross-sensitivity. The water cross-sensitivity was very low. These QCMs coated with cyclodextrin derivatives are employed as methanol sensors in the real atmosphere to detect on-line the concentration of methanol vapour.

Air Pollutants, Occupational↗
PubMed2001

Oligodendroglial tau filament formation in transgenic mice expressing G272V tau.

Genetic evidence indicates that several mutations in tau, including G272V, are linked to frontotemporal dementia with parkinsonism. We expressed this mutation in mouse brains by combining a prion protein promoter-driven expression system with an autoregulatory transactivator loop that resulted in high expression of human G272V tau in neurons and in oligodendrocytes. We show that G272V tau can form filaments in murine oligodendrocytes. Electron microscopy established that the filaments were either straight or had a twisted structure; these were 17-20 nm wide and had a periodicity of approximately 75 nm. Filament formation was associated with tau phosphorylation at distinct sites, including the AT8 epitope 202/205 in vivo. Immunogold electron microscopy of sarcosyl-extracted spinal cords from G272V transgenic mice using phosphorylation-dependent antibodies AT8 or AT100 identified several sparsely gold-labelled 6-nm filaments. In the spinal cord, fibrillary inclusions were also identified by thioflavin-S fluorescent microscopy in oligodendrocytes and motor neurons. These results establish that expression of the G272V mutation in mice causes oligodendroglial fibrillary lesions that are similar to those seen in human tauopathies.

Animals↗
PubMed2001

Substrate preferences of O-methyltransferases in alfalfa suggest new pathways for 3-O-methylation of monolignols.

Measurement of relative O-methyltransferase activities against all potential substrates in the monolignol pathway in developing alfalfa stem extracts revealed activities in the order: caffeoyl CoA > caffeoyl alcohol > 5-hydroxyferulic acid > caffeoyl aldehyde > 5-hydroxyconiferyl alcohol > 5-hydroxyferuloyl CoA > 5-hydroxyconiferaldehyde > caffeic acid. Maxima for all activities occurred in the seventh internode. In stem extracts from transgenic alfalfa with antisense downregulated caffeoyl CoA O-methyltransferase (CCoAOMT), activities with all substrates except for the two coenzyme A esters were unaffected. In contrast, downregulation of caffeic acid O-methyltransferase (COMT) reduced activities against the non-esterifed substrates in the order: 5-hydroxyconiferyl alcohol > 5-hydroxyferulic acid and caffeoyl alcohol > caffeoyl aldehyde > caffeic acid > 5-hydroxyconiferaldehyde. Recombinant COMT expressed in Escherichia coli exhibited the highest V(max)/K(m) values with 5-hydroxyconiferaldehyde and caffeoyl aldehyde, and the lowest with caffeic acid. These results indicate that COMT is unlikely to methylate caffeic acid during lignin biosynthesis in vivo, and provide enzymatic evidence for an alternative pathway to monolignols involving methylation of caffeoyl aldehyde and/or caffeoyl alcohol by COMT. The concept of independent pathways to guaiacyl and syringyl monolignols is discussed.

Catechol O-Methyltransferase↗
PubMed2001

Effect of pulley integrity on excursions and work of flexion in healing flexor tendons.

We investigated the effect of incision of a single critical pulley on excursions and work of flexion in healing flexor tendons. Forty-two long toes from 21 white leghorn chickens were used as the experimental model. Gliding excursions of the flexor digitorum profundus tendons and work of flexion of the long toes were studied 8 weeks after tendon repair to determine the functions of the healed tendons in intact, incised, or enlarged A2 pulleys. Eleven additional chickens (22 long toes) were used to obtain tendon excursion measurements in normal chicken toes. At 8 weeks, gliding excursions were statistically smaller in the intact pulley group than in the incised or enlarged pulley groups; the excursions were 73% +/- 4% for the intact pulley group, 88% +/- 9% for the incised pulley group, and 91% +/- 8% for the enlarged sheath group compared with the normal group. Work of flexion of the toes in the intact pulley group was statistically greater than that in the incised or enlarged pulley groups. Excursion efficiency of the flexor tendons was not statistically different among the toes receiving different treatments in the pulley. The results of this study demonstrate that release of a single pulley after repair of the tendons in this area improved gliding excursions of the tendons and reduced resistance to motion of the repaired tendons, and provide support for partial A2 pulley incision after repair of the tendons in the area of the pulley.

Analysis of Variance↗
PubMed2001

Four-dimensional dielectric property image obtained from electron spectroscopic imaging series.

We have demonstrated a new quantitative method to characterize two-dimensional distributions of energy-dependent dielectric function of materials from low loss electron spectroscopic image (ESI) series. Two problems associated with extracted image-spectrum from the low-loss image series, under-sampling and loss of energy resolution, were overcome by using fast Fourier transformation (FFT) interpolation and maximum entropy deconvolution method. In this study, Black Diamond/Si3N4/SiO2/Si-substrate dielectric layer designed for copper metallization was used as the sample. We show that the reconstructed (FFT interpolated and maximum entropy deconvoluted) image-spectrum obtained from ESI series images can be quantified with the same accuracy as conventional electron energy-loss spectroscopy spectra. Since the analysis of the dielectric function is sensitive to the local thickness of the specimen using Kramers-Kronig analysis, we also developed a new method to quantitatively determine the dielectric constant for low-k materials. We have determined the thickness of the Black Diamond using the extrapolated thickness method from the materials of known dielectric constants. Using Kramers-Kronig formula, the dielectric function map can be deduced from two-dimensional reconstructed single scattering spectra with providing the information of thickness. We proposed a four-dimensional data presentation for revealing the uniformity of the energy dependent property. The accuracy of our methods depends on the thickness determination and on the quality of the reconstructed spectra from the image series.

Journal Article↗
PubMed2001

Biomechanical evaluation of flexor tendon repair techniques.

Immediate active mobilization of repaired tendons is thought to be the most effective way to restore function of injured flexor tendons. Sixty human flexor digitorum profundus tendons were used to evaluate techniques for active tendon motion. The tendons were divided equally into six groups, and each group was assigned to one of the following techniques: Kessler core suture plus running peripheral suture, Kessler plus cross-stitch suture, Kessler plus Halsted suture, Tang core suture plus running peripheral suture, Tang plus cross-stitch suture, or Tang plus Halsted suture. Immediately after tendon repair, an Instron tensile testing machine was used to measure the 2-mm gap formation force, ultimate strength, elastic modulus, and energy to failure of the tendons repaired by these techniques. Ultimate strength, elastic modulus, and energy to failure were measured in load displacement curve. Results showed that the ultimate strength of the Tang plus Halsted or cross-stitch was, respectively, 116.8 +/- 9.6 N and 94.6 +/- 7.8 N; and 2-mm gap formation force was, respectively, 86.6 +/- 4.9 N and 71.9 +/- 5.1 N. The Tang plus Halsted or cross-stitch methods had a statistically significant increase in ultimate strength and 2-mm gap formation force as compared with the Kessler core suture or Tang plus running peripheral suture method. Elastic modulus and energy to failure of the Tang plus Halsted or cross-stitch suture were statistically higher than those of other techniques. The Tang plus cross-stitch or Tang plus Halsted sutures had the highest strength among the tested methods and are appropriate techniques for tendon repair in which the goal is immediate active tendon motion.

Biomechanical Phenomena↗
PubMed2001

Evaluation of four methods of flexor tendon repair for postoperative active mobilization.

Active mobilization of repaired flexor tendons requires sufficient suture strength. This study was designed to investigate the suitability of four newly developed and comparatively strong tendon sutures for flexor tendon repair with active digital mobilization. Fifty fresh flexor digitorum profundus tendons were randomly assigned to five groups and repaired using the Tang, cruciate, Robertson, Silfverskiold, and modified Kessler suture methods. The repaired tendons were subjected to mechanical testing in an Instron tensile machine to determine the 2-mm gap formation force, ultimate strength, elastic modulus, and energy to failure of the sutures. The 2-mm gap formation forces of the sutures were 43.0 N for the Tang, 37.4 N for the cruciate, 25.0 N for the Robertson, 32.3 N for the Silfverskiold, and 21.2 N for the modified Kessler methods. The ultimate strength of the sutures was 53.6 N for the Tang, 46.3 N for the cruciate, 41.6 N for the Robertson, 41.0 N for the Silfverskiold, and 24.7 N for the modified Kessler methods. Statistically, the gap formation force and ultimate strength were the highest in the Tang, higher in the cruciate, and the lowest for the Robertson and the modified Kessler methods. The elastic modulus of the repaired tendons, as represented by the linear slope of the force-displacement curve, was also statistically the largest in the Tang, larger in the cruciate, and lowest for the Robertson and modified Kessler methods. Energy to failure was statistically the largest in the Tang, higher in the cruciate, lower in the Silfverskiold and the Robertson, and the lowest for the modified Kessler methods. It was concluded that significant differences exist in mechanical properties of the newly developed tendon suture methods. Among the methods for tendon repair that were tested, the Tang and the cruciate sutures were the best candidates for flexor tendon repair in the hand with postoperative active mobilization because of their superior tensile strength, elastic properties, energy to failure, and reasonable operation time.

Elasticity↗
PubMed2001

Analysis of the cat eye syndrome critical region in humans and the region of conserved synteny in mice: a search for candidate genes at or near the human chromosome 22 pericentromere.

We have sequenced a 1.1-Mb region of human chromosome 22q containing the dosage-sensitive gene(s) responsible for cat eye syndrome (CES) as well as the 450-kb homologous region on mouse chromosome 6. Fourteen putative genes were identified within or adjacent to the human CES critical region (CESCR), including three known genes (IL-17R, ATP6E, and BID) and nine novel genes, based on EST identity. Two putative genes (CECR3 and CECR9) were identified, in the absence of EST hits, by comparing segments of human and mouse genomic sequence around two solitary amplified exons, thus showing the utility of comparative genomic sequence analysis in identifying transcripts. Of the 14 genes, 10 were confirmed to be present in the mouse genomic sequence in the same order and orientation as in human. Absent from the mouse region of conserved synteny are CECR1, a promising CES candidate gene from the center of the contig, neighboring CECR4, and CECR7 and CECR8, which are located in the gene-poor proximal 400 kb of the contig. This latter proximal region, located approximately 1 Mb from the centromere, shows abundant duplicated gene fragments typical of pericentromeric DNA. The margin of this region also delineates the boundary of conserved synteny between the CESCR and mouse chromosome 6. Because the proximal CESCR appears abundant in duplicated segments and, therefore, is likely to be gene poor, we consider the putative genes identified in the distal CESCR to represent the majority of candidate genes for involvement in CES.

Abnormalities, Multiple↗
PubMed2001

Downregulation of caffeic acid 3-O-methyltransferase and caffeoyl CoA 3-O-methyltransferase in transgenic alfalfa. impacts on lignin structure and implications for the biosynthesis of G and S lignin.

Transgenic alfalfa plants were generated harboring caffeic acid 3-O-methyltransferase (COMT) and caffeoyl CoA 3-O-methyltransferase (CCOMT) cDNA sequences under control of the bean phenylalanine ammonia-lyase PAL2 promoter. Strong downregulation of COMT resulted in decreased lignin content, a reduction in total guaiacyl (G) lignin units, a near total loss of syringyl (S) units in monomeric and dimeric lignin degradation products, and appearance of low levels of 5-hydroxy guaiacyl units and a novel dimer. No soluble monolignol precursors accumulated. In contrast, strong downregulation of CCOMT led to reduced lignin levels, a reduction in G units without reduction in S units, and increases in beta-5 linked dimers of G units. Accumulation of soluble caffeic acid beta-d-glucoside occurred only in CCOMT downregulated plants. The results suggest that CCOMT does not significantly contribute to the 3-O-methylation step in S lignin biosynthesis in alfalfa and that there is redundancy with respect to the 3-O-methylation reaction of G lignin biosynthesis. COMT is unlikely to catalyze the in vivo methylation of caffeic acid during lignin biosynthesis.

Base Sequence↗
PubMed2001

Application of digital image analysis and flow cytometry to enumerate marine viruses stained with SYBR gold.

A novel nucleic acid stain, SYBR Gold, was used to stain marine viral particles in various types of samples. Viral particles stained with SYBR Gold yielded bright and stable fluorescent signals that could be detected by a cooled charge-coupled device camera or by flow cytometry. The fluorescent signal strength of SYBR Gold-stained viruses was about twice that of SYBR Green I-stained viruses. Digital images of SYBR Gold-stained viral particles were processed to enumerate the concentration of viral particles by using digital image analysis software. Estimates of viral concentration based on digitized images were 1.3 times higher than those based on direct counting by epifluorescence microscopy. Direct epifluorescence counts of SYBR Gold-stained viral particles were in turn about 1.34 times higher than those estimated by the transmission electron microscope method. Bacteriophage lysates stained with SYBR Gold formed a distinct population in flow cytometric signatures. Flow cytometric analysis revealed at least four viral subpopulations for a Lake Erie sample and two subpopulations for a Georgia coastal sample. Flow cytometry-based viral counts for various types of samples averaged 1.1 times higher than direct epifluorescence microscopic counts. The potential application of digital image analysis and flow cytometry for rapid and accurate measurement of viral abundance in aquatic environments is discussed.

Cyanobacteria↗
PubMed2001

Distribution, isolation, host specificity, and diversity of cyanophages infecting marine Synechococcus spp. in river estuaries.

The abundance of cyanophages infecting marine Synechococcus spp. increased with increasing salinity in three Georgia coastal rivers. About 80% of the cyanophage isolates were cyanomyoviruses. High cross-infectivity was found among the cyanophages infecting phycoerythrin-containing Synechococcus strains. Cyanophages in the river estuaries were diverse in terms of their morphotypes and genotypes.

Bacteriophages↗
PubMed2001

Lack of muscarinic regulation of Ca(2+) channels in G(i2)alpha gene knockout mouse hearts.

The purpose of the present study was to examine the role of G(i2)alpha in Ca(2+) channel regulation using G(i2)alpha gene knockout mouse ventricular myocytes. The whole cell voltage-clamp technique was used to study the effects of the muscarinic agonist carbachol (CCh) and the beta-adrenergic agonist isoproterenol (Iso) on cardiac L-type Ca(2+) currents in both 129Sv wild-type (WT) and G(i2)alpha gene knockout (G(i2)alpha-/-) mice. Perfusion with CCh significantly inhibited the Ca(2+) current in WT cells, and this effect was reversed by adding atropine to the CCh-containing solution. In contrast, CCh did not affect Ca(2+) currents in G(i2)alpha-/- ventricular myocytes. Addition of CCh to Iso-containing solutions attenuated the Iso-stimulated Ca(2+) current in WT cardiomyocytes but not in G(i2)alpha-/- cells. These findings demonstrate that, whereas the Iso-G(s)alpha signal pathway is intact in G(i2)alpha gene knockout mouse hearts, these cells lack the inhibitory regulation of Ca(2+) channels by CCh. Therefore, G(i2)alpha is necessary for the muscarinic regulation of Ca(2+) channels in the mouse heart. Further studies are needed to delineate the possible interaction of G(i) and other cell signaling proteins and to clarify the level of interaction of G protein-coupled regulation of L-type Ca(2+) current in the heart.

Adrenergic beta-Agonists↗
PubMed2001

Inhibition of L-type Ca2+ channel current in Xenopus oocytes by amiodarone.

BACKGROUND: Although amiodarone has been referred to as a class III antiarrhythmic agent, it also possesses electrophysiologic characteristics of the three other classes (classes I and IV and minor class II effects). Previous studies have demonstrated that amiodarone inhibits Ca2+ channel current in intact cardiac myocytes. However, it is not clear whether this response reflects a pure class IV effect (direct Ca2+ channel inhibition) or a class II effect (beta-adrenergic receptor blockade) of amiodarone. METHODS: In the current study, the effects of amiodarone on Ca2+ current were studied in the absence of sympathetic regulation using a Xenopus oocyte expression system. The L-type Ca2+ channel alpha1C subunit was coexpressed with the alpha2delta and beta2a subunits in enzymatically digested Xenopus oocytes. Ca2+ currents were recorded using the cut-open oocyte preparation. RESULTS: We found that perfusion of 10 microM isoproterenol produced no significant change in peak Ca2+ current (from 223+/-33 to 210+/-29 nA, mean+/-SEM, n=5, P=not significant), indicating the absence of a functional stimulatory sympathetic signal pathway in these oocytes. After 10 minutes of exposure to 10 microM amiodarone, Ca2+ current amplitude was significantly decreased from 174+/-33 to 100+/-26 nA (n=8, P<0.01; control group: 220+/-33 to 212+/-29 nA, n=5, P=not significant). These effects were similar to those of 10 microM nifedipine (201+/-48 to 108+/-48 nA, n=6, P<0.05), a typical Ca2+ channel blocker. On the other hand, neither amiodarone nor nifedipine significantly altered the Ca2+ current activation or inactivation kinetics. CONCLUSIONS: These results demonstrate that amiodarone inhibits Ca2+ current in the absence of a functional intrinsic beta-adrenergic stimulatory system and, therefore, represents a true class IV effect.

Amiodarone↗