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Biomedical subjects

Eric F Schoenmakers

Publications and source records attributed to Eric F Schoenmakers.

2 recordsLinked to original sources

Does conventional cytogenetics detect the real frequency of 19q13 aberrations in benign thyroid lesions? A survey of 38 cases.

Structural aberrations involving chromosomal band 19q13.4 are examples of clonal cytogenetic deviations that have been detected in subgroups of follicular thyroid adenomas and goiters. About 45% of the adenomas and 8% of the goiters showed clonal aberrations, about 20% of which involve 19q13. The aberrations are translocations with a remarkable variation of the translocation partners of chromosome 19. Considering that structural changes involving small chromosome segments do not always have a characteristic band to be accurately identified, one may assume an even higher rate of these aberrations in thyroid lesions. To detect hidden 19q13 translocations, we performed fluorescence in situ hybridization analyses with a subtelomeric 19q specific probe on a subset of 38 thyroid adenomas with an apparently normal karyotype. No hidden chromosome abnormality was detected in our study, indicating that conventional cytogenetics reflects the true percentage of 19q13 aberrations in follicular thyroid adenomas.

Chromosome Aberrations↗

Chromosomal breakpoint mapping by arrayCGH using flow-sorted chromosomes.

Despite the recent completion of the human genome project, the mapping of disease-related chromosomal translocation breakpoints and genes has remained laborious. Here, we describe a novel and rapid procedure to map such translocation breakpoints using flow-sorted chromosomes in combination with array-based comparative genomic hybridization (arrayCGH). To test the feasibility of this approach, we used a t(12;15)(q13;q25)-positive cell line with known breakpoint positions as a model. The derivative 12 chromosomes were flow-sorted, labeled, and hybridized to a genome-wide array containing 3648 well-characterized human genomic clones. The exact locations of the breakpoints on both chromosome 12 and 15 could be determined in a single hybridization experiment. In addition, we have tested the minimal amount of material necessary to perform these experiments and show that it is possible to obtain highly reliable profiles using as little as 10,000 flow-sorted chromosomes.

Chromosome Breakage↗