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Biomedical subjects

E J Karjalainen

Publications and source records attributed to E J Karjalainen.

4 recordsLinked to original sources

Finding the "natural" vector bases for multidimensional reference values.

The concept of reference values can be extended to multidimensional results. A probability function describes the relative density of the observations in the multivariate space. When the density of a given point is measured relative to all other points, we get an estimate of the density rank of a given point. If the rank of a point is lower than 95 per cent of all points, the multidimensional result is outside the multidimensional reference range. The single-dimensional case is a special case of this general concept. Many observations are needed to define multidimensional distributions. However, less points are needed if the dimensionality of the data matrix is reduced by statistical methods such as principal component analysis (PCA). Also other vector bases than the orthogonal solution produced by PCA are possible, and all of them compress data equally well. So the choice must be based on other criteria than compression. We propose using a vector basis that consists of positive numbers. The positive vectors can be found by direct methods such as Alternating Regression (AR) or they can be modified from the results of the PCA. Positive vectors resemble the spectra that are familiar in chemistry and physics. They are a "natural" way to describe multidimensional results. It is easier to name the positive vectors than the purely statistical vectors of PCA. To obtain a unique positive solution, additional constraints besides positivity are needed.

Clinical Laboratory Techniques↗

Mathematical isolation of component spectra in HPLC/UV-vis and GC-MS. How unique are the resolved spectra?

The resolution of overlapping spectra in GC-MS and HPLC/UV-vis is fundamentally limited by the quality of the experimental data. The narrowness of the solution range depends on the degree of overlap between components. If the components are dissimilar, the solutions obtained by all mathematical methods are robust. Small perturbations in the observations do not change the calculated solution very much. Alternating regression (AR) is a useful tool in the analysis of overlapping spectra because AR can be calculated very rapidly. The robustness of the solution can be easily checked with AR. The mathematical analysis is repeated several times after adding different sets of noise. Each time different random spectra are used as a starting point. The range of solutions thus obtained reflects the quality of the data for resolution purposes.

Chemistry Techniques, Analytical↗

Analysis of external quality assessment results in three dimensions.

During the last six years there has been a marked change in the nature of interlaboratory variance in enzyme determinations in Finland. With ordinary two-dimensional plotting methods the change is difficult to see, because enzyme activities are different for each control serum. The decrease in the coefficient of variation (CV) is best seen when the CV is displayed as a trend surface as a function of time and enzyme activity. While the overall variance has decreased, the shape of the curve relating CV to enzyme activity has also changed. The dependence of CV on the enzyme activity level has decreased slightly. The use of trend surfaces to describe three-dimensional functions in external quality assessment is described.

Analysis of Variance↗