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Biomedical subjects

Douglas S Watson

Publications and source records attributed to Douglas S Watson.

2 recordsLinked to original sources

Creating multiple time-shared laser traps with simultaneous displacement detection using digital signal processing hardware.

We present a design for implementing multiple laser traps for single-molecule studies through time-sharing using commercially available digital signal processing hardware in a computer running a standard multitasking operating system. This design enables four to six independent laser traps with a visitation frequency of 10,000s(-1)trap(-1) and a timing jitter of +/-0.5 micros to be created. The design also achieves nanometer-resolution detection of displacement in all of the traps simultaneously via back focal-plane interferometry and only a single quadrant photodiode detector. Practical design considerations and limitations together with the use of fiberlasers in laser traps are discussed. Using this device, the mechanokinetics of multiple molecular motors or adhesion proteins may be measured simultaneously. We present the example biological application of two kinesin-coated beads in separate traps moving on different portions of a microtubule.

Equipment Design↗

Facile synthesis of multivalent nitrilotriacetic acid (NTA) and NTA conjugates for analytical and drug delivery applications.

High-affinity nitrilotriacetic acids (NTA) have great potential in the molecular manipulation of His-tagged proteins. We have developed a facile method to synthesize multivalent NTA and its conjugates. Starting with appropriately protected lysine, we synthesized the mono-NTA synthons functionalized with either an amino group or a carboxylic group. We then obtained tri-NTA through the condensation of the amino NTA and the carboxylic NTA. Using amino tri-NTA as the key intermediate, we synthesized a series of tri-NTA conjugates with a variety of functional units including biotin, dialkyl, fluorescein, and a hydroxybenzimidate moiety. The biotin-tri-NTA was employed to convert a Biacore streptavidin chip into a high-affinity tri-NTA chip. The equilibrium dissociation constants of tri-NTA/His-tagged protein complexes measured by surface plasmon resonance are in the 20 nM range. Histidine(6)-tagged yeast cytosine deaminase (His6-yCD) was incorporated onto the liposome surface by the lipid-tri-NTA conjugate without any activity loss. Fluorescein-tri-NTA formed a stable 1:1 complex with His6-yCD without significant fluorescence quenching. Specific tri-NTA derivatives for the radiolabeling and coupling of two His-tagged proteins to each other are described. Thus, we have added to the toolbox a number of high-affinity tri-NTA adaptors for the manipulation of His-tagged molecules.

Biotin↗