Biomedical subjects

Debashis Mukherjee

Publications and source records attributed to Debashis Mukherjee.

5 recordsLinked to original sources

PubMed2005

Development of a relaxation-inducing cluster expansion formalism for treating strong relaxation and correlation effects.

We present in this paper a comprehensive account of an explicitly spin-free coupled cluster theory for treating energy differences of open-shell states relative to a closed-shell ground state, where the open-shell states of interest are dominated by a few simple configuration state functions. We develop a valence-universal coupled cluster formalism to achieve this via a novel cluster expansion ansatz for the valence part of the wave operator, where the orbital relaxation and the correlation relaxation accompanying ionization/excitation from the ground state are taken care of to all orders in compact, efficient, and explicitly spin-free manner. The essential difference of our proposed ansatz from the ordinary and the normal-ordered cluster ansatz in vogue is that (a) we allow the valence cluster operators to be connected among themselves with spectator valence lines only and (b) we use suitable combinatoric factors accompanying powers of cluster operators thus connected, which are equal to the number of ways the operators can be joined, leading to the same excitation (the automorphic factor). We emphasize that such an ansatz does not generate terms (diagrams) with chains of cluster operators joined among themselves via spectator lines only. Barring only a few, almost all the terms in the working equations determining the cluster amplitudes involve contraction of the Hamiltonian with the cluster operators via at least one nonspectator line, leading to what we call a "strongly connected" series. The structure of the working equation is remarkably similar to the single-reference closed-shell equation, with a few additional terms. The presence of contractions among cluster operators via spectator lines introduces the additional physical effects of orbital and correlation relaxation using low-body cluster operators. As an illustrative application of the new multireference coupled cluster (CC) theory, we consider in this paper computation of ionization potentials (IPs) of one-valence problem with only one active orbital. The numerical applications are made for both the core- and the inner- and outer-valence IPs for several molecular systems. The numerical values demonstrate the superiority of the relaxation-inducing CC theory, as compared to the normal-ordered ansatz.

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PubMed2005

Comparison of low-order multireference many-body perturbation theories.

Tests have been made to benchmark and assess the relative accuracies of low-order multireference perturbation theories as compared to coupled cluster (CC) and full configuration interaction (FCI) methods. Test calculations include the ground and some excited states of the Be, H(2), BeH(2), CH(2), and SiH(2) systems. Comparisons with FCI and CC calculations show that in most cases the effective valence shell Hamiltonian (H(v)) method is more accurate than other low-order multireference perturbation theories, although none of the perturbative methods is as accurate as the CC approximations. We also briefly discuss some of the basic differences among the multireference perturbation theories considered in this work.

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PubMed2004

Irreducible Brillouin conditions and contracted Schrödinger equations for n-electron systems. III. Systems of noninteracting electrons.

We analyze the structure and the solutions of the irreducible k-particle Brillouin conditions (IBCk) and the irreducible contracted Schrödinger equations (ICSEk) for an n-electron system without electron interaction. This exercise is very instructive in that it gives one both the perspective and the strategies to be followed in applying the IBC and ICSE to physically realistic systems with electron interaction. The IBC1 leads to a Liouville equation for the one-particle density matrix gamma1=gamma, consistent with our earlier analysis that the IBC1 holds both for a pure and an ensemble state. The IBC1 or the ICSE1 must be solved subject to the constraints imposed by the n-representability condition, which is particularly simple for gamma. For a closed-shell state gamma is idempotent, i.e., all natural spin orbitals (NSO's) have occupation numbers 0 or 1, and all cumulants lambdak with k> or =2 vanish. For open-shell states there are NSO's with fractional occupation number, and at the same time nonvanishing elements of lambda2, which are related to spin and symmetry coupling. It is often useful to describe an open-shell state by a totally symmetric ensemble state. If one wants to treat a one-particle perturbation by means of perturbation theory, this mainly as a run-up for the study of a two-particle perturbation, one is faced with the problem that the perturbation expansion of the Liouville equation gives information only on the nondiagonal elements (in a basis of the unperturbed states) of gamma. There are essentially three possibilities to construct the diagonal elements of gamma: (i) to consider the perturbation expansion of the characteristic polynomial of gamma, especially the idempotency for closed-shell states, (ii) to rely on the ICSE1, which (at variance with the IBC1) also gives information on the diagonal elements, though not in a very efficient manner, and (iii) to formulate the perturbation theory in terms of a unitary transformation in Fock space. The latter is particularly powerful, especially, when one wishes to study realistic Hamiltonians with a two-body interaction.

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PubMed2004

Irreducible Brillouin conditions and contracted Schrödinger equations for n-electron systems. IV. Perturbative analysis.

The k-particle irreducible Brillouin conditions IBCk and the k-particle irreducible contracted Schrödinger equations ICSEk for a closed-shell state are analyzed in terms of a Møller-Plesset-type perturbation expansion. The zeroth order is Hartree-Fock. From the IBC2(1), i.e., from the two-particle IBC to first order in the perturbation parameter mu, one gets the leading correction lambda2(1) to the two-particle cumulant lambda2 correctly. However, in order to construct the second-order energy E(2), one also needs the second-order diagonal correction gammaD(2) to the one-particle density matrix gamma. This can be obtained: (i) from the idempotency of the n-particle density matrix, i.e., essentially from the requirement of n-representability; (ii) from the ICSE1(2); or (iii) by means of perturbation theory via a unitary transformation in Fock space. Method (ii) is very unsatisfactory, because one must first solve the ICSE3(2) to get lambda3(2), which is needed in the ICSE2(2) to get lambda2(2), which, in turn, is needed in the ICSE1(2) to get gamma(2). Generally the (k+1)-particle approximation is needed to obtain Ek correctly. One gains something, if one replaces the standard hierarchy, in which one solves the ICSEk, ignoring lambda(k+1) and lambda(k+2), by a renormalized hierarchy, in which only lambda(k+2) is ignored, and lambda(k+1) is expressed in terms of the lambdap of lower particle rank via the partial trace relation for lambda(k+2). Then the k-particle approximation is needed to obtain E(k) correctly. This is still poorer than coupled-cluster theory, where the k-particle approximation yields E(k+1). We also study the possibility to use some simple necessary n-representability conditions, based on the non-negativity of gamma(2) and two related matrices, in order to get estimates for gammaD(2) in terms of lambda2(1). In general these estimates are rather weak, but they can become close to the best possible bounds in special situations characterized by a very sparse structure of lambda2 in terms of a localized representation. The perturbative analysis does not encourage the use of a k-particle hierarchy based on the ICSEk (or on their reducible counterparts, the CSEk), it rather favors the approach in terms of the unitary transformation, where the k-particle approximation yields the energy correct up to E(2k-1). The problems that arise are related to the unavoidable appearance of exclusion-principle violating cumulants. The good experience with perturbation theory in terms of a unitary transformation suggests that one should abandon a linearly convergent iteration scheme based on the ICSEk hierarchy, in favor of a quadratically convergent one based on successive unitary transformations.

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PubMed2004

A state-specific approach to multireference coupled electron-pair approximation like methods: development and applications.

The traditional multireference (MR) coupled-cluster (CC) methods based on the effective Hamiltonian are often beset by the problem of intruder states, and are not suitable for studying potential energy surface (PES) involving real or avoided curve crossing. State-specific MR-based approaches obviate this limitation. The state-specific MRCC (SS-MRCC) method developed some years ago can handle quasidegeneracy of varying degrees over a wide range of PES, including regions of real or avoided curve-crossing. Motivated by its success, we have suggested and explored in this paper a suite of physically motivated coupled electron-pair approximations (SS-MRCEPA) like methods, which are designed to capture the essential strength of the parent SS-MRCC method without significant sacrificing its accuracy. These SS-MRCEPA theories, like their CC counterparts, are based on complete active space, treat all the reference functions on the same footing and provide a description of potentially uniform precision of PES of states with varying MR character. The combining coefficients of the reference functions are self-consistently determined along with the cluster amplitudes themselves. The newly developed SS-MRCEPA methods are size-extensive, and are also size-consistent with localized orbitals. Among the various versions, there are two which are invariant with respect to the restricted rotations among doubly occupied and active orbitals separately. Similarity of performance of this latter and the noninvariant versions at the crossing points of the degenerate orbitals imply that the all the methods presented are rather robust with respect to the rotations among degenerate orbitals. Illustrative numerical applications are presented for PES of the ground state of a number of difficult test cases such as the model H4, H(8) problems, the insertion of Be into H(2), and Li(2), where intruders exist and for a state of a molecule such as CH(2), with pronounced MR character. Results obtained with SS-MRCEPA methods are found to be comparable in accuracy to the parent SS-MRCC and FCI/large scale CI results throughout the PES, which indicates the efficacy of our SS-MRCEPA methods over a wide range of geometries, despite their neglect of a host of complicated nonlinear terms, even when the traditional MR-based methods based on effective Hamiltonians fail due to intruders.

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