Biomedical subjects

Alpo Värri

Publications and source records attributed to Alpo Värri.

13 recordsLinked to original sources

PubMed2006

Systematic performance evaluation of a continuous-scale sleep depth measure.

In this article, systematic performance evaluation of a continuous-scale sleep depth measure will be discussed. Our main objective has been to select the adjustable analysis parameters such that the best possible correspondence between method output and standard visual sleep staging could be achieved. Sleep depth estimation was based on continuous monitoring of short-time EEG synchronization through the local mean frequency of the EEG. During the experiments, total amount of 752 different combinations of four adjustable parameters were compared based on all-night sleep EEG recordings of 15 healthy subjects. Optimization strategy applied was based on maximizing the weighted average of pair-wise separabilities of EEG mean frequency distributions in all the standard sleep stage pairs. Finally, robustness of the optimized parameters was verified with an independent dataset of 34 all-night sleep recordings. Our results show that clear topological differences between brain hemispheres and different electrode locations exist. Performance improvements of even 20-30% units can be achieved by proper selection of analysis parameters and the EEG derivation used for the analysis. Remarkable independence of system performance on the analysis window length leads to improved temporal resolution compared to that achieved through standard visual analysis. In addition to giving practical suggestions on the parameter selection, we also propose a possible method for improving stage separability especially between S2 and REM.

Adult↗

PubMed2006

Automatic detection of slow wave sleep using two channel electro-oculography.

An automatic method was developed for detecting slow wave sleep (SWS). The automatic method is based on a two-channel electro-oculography (EOG) with left mastoid (M1) as reference. Synchronous electroencephalographic (EEG) activity was detected by calculating cross-correlation between the two EOG channels by using 0.5-6 Hz band. An amplitude criterion was used for detecting slow waves and beta power 18-30 Hz was used to exclude artefacts. The automatic scoring was compared to a standard visual sleep scoring based on EOG, central EEG and submental EMG. Sleep EEG and EOG were recorded from 265 subjects. The optimal cross-correlation, amplitude and beta thresholds were derived using data from 133 training subjects and then applied to the data from different 132 validation subjects. Results were most sensitive to the changes in the amplitude criteria. Cohen's Kappa between the visual and the new developed automatic scoring in separating non-SWS and SWS was substantial (0.70) with epoch-by-epoch agreement of 93%. SWS epoch detection sensitivity was 75% and specificity was 96%. Also the total amount of slow waves, slow wave time (SWT), was estimated. The advantage of the automatic method is that it could be applied during online recordings using only four disposable self-adhesive electrodes.

Adult↗

PubMed2006

Topographic differences in mean computational sleep depth between healthy controls and obstructive sleep apnoea patients.

In this work, topographic differences in computational sleep depth between healthy controls and obstructive sleep apnoea syndrome (OSAS) patients have been examined. Sleep depth estimation was based on continuous monitoring of the mean frequency of the EEG. During the experiments, all-night sleep EEG recordings of carefully age and gender matched sets of 16 healthy controls and 16 OSAS patients were compared on six electrode locations (Fp1-M2, Fp2-M1, C3-M2, C4-M1, O1-M2, and O2-M1). To optimise the diagnostic ability of the method, we examined the influence of 45 sets of adjustable analysis parameters on the ability of the method to show differences in computational sleep depth between the diagnostic groups. The results show clearly that although the visual scores for a set of epochs are the same for both clinical groups, computational sleep depth measure still shows deeper local sleep for healthy controls, both during NREM and REM sleep. Although the best achievable performance in different sleep stages is reached in different EEG derivations and with different parameter values, computation of sleep depth with 1-s output resolution in non-overlapping segments of 2s (400 samples) with maximum analysis band frequency of 20.5 Hz and 51-point moving median smoothing on Fp2-M1 or O1-M2 leads to near-optimal performance in deep sleep or wakefulness/light sleep, respectively.

Adult↗

PubMed2006

Apnea patients show a frontopolar inter-hemispheric spindle frequency difference.

Sleep apnea syndrome is known to disturb sleep. The purpose of the present work was to study spindle frequency in apnea patients. All-night sleep EEG recordings of 15 apnea patients and 15 control subjects with median ages of 47 and 46 years, respectively, were studied. A previously presented and validated multi-channel spindle analysis method was applied for automatic detection and frequency analysis of bilateral frontopolar and central spindles. Bilateral frontopolar spindles of apnea patients were found to show lower frequencies on the left hemisphere than on the right. Such an inter-hemispheric spindle frequency difference in apnea patients is a novel finding. It could be that the hypoxias and hypercapnias caused by apneic episodes result in local disruption in the regulation of sleep in the frontal lobes.

Adult↗

PubMed2006

Computer program for automated sleep depth estimation.

In this article, we present a new implementation of an amplitude-independent method for continuous-scale sleep depth estimation. Having been implemented as an add-on analysis module under commercially available biosignal recording and analysis software, it can be easily applied in clinical routine. The software gives the user full freedom to change all the analysis parameters inside theoretical limits. Computational sleep depth profiles produced by the presented software compare favourably with visual classifications. Future work will concentrate on systematic optimization of analysis parameters, further evaluation of the method with disturbed sleep and application of the method for automated adaptive sleep analysis.

Electronic Data Processing↗

PubMed2006

Determination of dominant simulated spindle frequency with different methods.

Accurate analysis of EEG sleep spindle frequency is challenging. The frequency content of true sleep spindles is not known. Therefore, simulated spindle activity was studied in the present work. Five types of simulated test signals were designed, all containing a dominant spindle represented by a 13-Hz sine wave as such or with a waxing and waning pattern accompanied by a secondary spindle activity in three test signals. Background EEG was included in four test signals, modeled either as small additional sinusoids across the spindle frequency range or as filtered Gaussian noise segments. The purpose of this study was to investigate how accurately the dominant spindle frequency of 13 Hz could be resolved with different methods in the presence of the interfering waveforms. A matching pursuit (MP) based approach, discrete Fourier transform (DFT) with Hanning windowing with and without zero padding, Hankel total least squares (HTLS) and wavelet methods were compared in the analyses. MP method provided best overall performance, followed closely by DFT with zero padding. Comparative studies like this are important to decide the method of choice in clinical sleep EEG analysis.

Algorithms↗

PubMed2005

Automatic detection of spiking events in EMFi sheet during sleep.

In this paper we present a new method for detection of spiking events caused by the increased respiratory resistance (IRR) from ballistocardiographic (BCG) data recorded with EMFi sheet. Spiking is a phenomenon where BCG wave complexes increase in amplitude during IRR. In this study data from six patients with a total of 1503 visually scored spiking events were studied. The algorithm monitors amplitude levels of BCG complexes and detects large relative increases. In this work 10 different variations of the algorithm were compared in order to find the best variation, which can cope with different recordings. The best variation of the algorithm was able to detect spiking events with 80% true positive and 19% false positive rates. The detection is not dependent on absolute waveform amplitudes and therefore does not require any recording-specific tuning prior to application. It is important to recognize spiking events in order to evaluate the severity of respiratory disturbance during sleep.

Algorithms↗

PubMed2005

Automated frequency analysis of synchronous and diffuse sleep spindles.

BACKGROUND: Sleep spindles have different properties in different localizations in the cortex. OBJECTIVES: First main objective was to develop an amplitude-independent multi-channel spindle detection method. Secondly the method was applied to study the anteroposterior frequency differences of pure synchronous (visible bilaterally, either frontopolarly or centrally) and diffuse (visible bilaterally both frontopolarly and centrally) sleep spindles. METHODS: A previously presented spindle detector based on the fuzzy reasoning principle and a level detector were combined to form a multi-channel spindle detector. RESULTS: The spindle detector had a 76.17% true positive rate and 0.93% false-positive rate. Pure central spindles were faster and pure frontal spindles were slower than diffuse spindles measured simultaneously from both locations. CONCLUSIONS: The study of frequency relations of spindles might give new information about thalamocortical sleep spindle generating mechanisms.

Adult↗

PubMed2005

Anteroposterior difference in EEG sleep depth measure is reduced in apnea patients.

In the present work, mean frequencies of FFT amplitude spectra from six EEG derivations were used to provide a frontopolar, a central and an occipital sleep depth measure. Parameters quantifying the anteroposterior differences in these three sleep depth measures during the night were also developed. The method was applied to analysis of 30 all-night recordings from 15 healthy control subjects and 15 apnea patients. Control subjects showed larger differences in sleep depth between frontopolar and central positions than the apnea patients. The relatively reduced frontal sleep depth in apnea patients might reflect the disruption of the dynamic sleep process caused by apneas.

Adult↗

PubMed2004

Automatic quantification of light sleep shows differences between apnea patients and healthy subjects.

A fully automatic method to quantify sleep depth during the night was developed in the present work. The method was tested using 20 all-night recordings from 10 healthy control subjects and 10 sleep apnea patients. The results showed statistically significant differences in sleep depth between control subjects and sleep apnea patients. The overall sleep was lighter in apnea patients than in healthy control subjects, most likely indicating a disturbed sleep caused by apneas. The automatic parameters presented provide a method to quantify the light sleep and could in the future possibly be used in clinical sleep studies and follow-up of treatment.

Adult↗

PubMed2003

Sleep depth oscillations: an aspect to consider in automatic sleep analysis.

The automatic sleep analysis aims at providing an accurate description of sleep process. We found that there exist so far poorly known sleep depth oscillations constantly. Quantitative analysis of these oscillations was done in this work via a mean frequency measure and FFT. Overall charasteristics of these oscillations were studied, focusing on the waves with period times of 5-150 s. These sleep depth oscillations have a relatively large amplitude and they should be considered in future sleep analysis systems. The results of this study give directions to automated sleep analysis regarding optimal estimation of sleep depth.

Adult↗

PubMed2002

Fuzzy detection of EEG alpha without amplitude thresholding.

Intelligent automated systems are needed to assist the tedious visual analysis of polygraphic recordings. Most systems need detection of different electroencephalogram (EEG) waveforms. The problem in automated detection of alpha activity is the large inter-individual variability of its amplitude and duration. In this work, a fuzzy reasoning based method for the detection of alpha activity was designed and tested using a total of 32 recordings from seven different subjects. Intelligence of the method was distributed to features extracted and the way they were combined. The ranges of the fuzzy rules were determined based on feature statistics. The advantage of the detector is that no alpha amplitude threshold needs to be selected. The performance of the alpha detector was assessed with receiver operating characteristic (ROC) curves. When the true positive rate was 94.2%, the false positive rate was 9.2%, which indicates good performance in sleep EEG analysis.

Adult↗

PubMed2002

A study on gender and age differences in sleep spindles.

In the present work, gender differences in sleep spindle topography were examined in 40 subjects. Their median age was 32 years (range 22-49 years). Spindles were detected from 3,306,060 s of visually scored stage 2 sleep EEG by a previously validated automatic fuzzy detector at 1-second intervals. A total of 271,168 spindles were found from the six EEG channels analyzed. Females showed a significantly higher percentage of spindles in the left frontal channel than males (Fp1-A2; p = 0.026). To confirm that this difference was gender and not age related, the subjects were divided into two age groups. No significant differences in spindle activity of the frontal channels were found between the groups. However, the interindividual spindle variability seemed to be at least as large as that stemming from gender.

Adult↗