Search PubMed⌕ Search

Biomedical subjects

Alexandra M Z Slawin

Publications and source records attributed to Alexandra M Z Slawin.

At least 19 recordsLinked to original sources
PubMed2006

Enantioselective synthesis of an all-syn four vicinal fluorine motif.

Alkanes bearing multiple vicinal fluorine atoms at adjacent stereocenters may be considered intermediate between alkanes and perfluoroalkanes, and as a class, their chemistry and behavior remain to be explored. We report here a stereoselective synthesis of an all-syn four vicinal fluorine motif as a single enantiomer. The four vicinal fluorine compound was amenable to single-crystal X-ray analysis, and the resulting structure displays gauche relationships between all four fluorines, consistent with the fluorine gauche effect, and CF...HC hydrogen bonding between adjacent fluoroalkyl chains.

Crystallography, X-Ray↗
PubMed2006

The vicinal difluoro motif: The synthesis and conformation of erythro- and threo- diastereoisomers of 1,2-difluorodiphenylethanes, 2,3-difluorosuccinic acids and their derivatives.

BACKGROUND: It is well established that vicinal fluorines (RCHF-CHFR) prefer to adopt a gauche rather than an anti conformation when placed along aliphatic chains. This has been particularly recognised for 1,2-difluoroethane and extends to 2,3-difluorobutane and longer alkyl chains. It follows in these latter cases that if erythro and threo vicinal difluorinated stereoisomers are compared, they will adopt different overall conformations if the fluorines prefer to be gauche in each case. This concept is explored in this paper with erythro- and threo- diastereoisomers of 2,3-difluorosuccinates. RESULTS: A synthetic route to 2,3-difluorosuccinates has been developed through erythro- and threo- 1,2-difluoro-1,2-diphenylethane which involved the oxidation of the aryl rings to generate the corresponding 2,3-difluorosuccinic acids. Ester and amide derivatives of the erythro- and threo- 2,3-difluorosuccinic acids were then prepared. The solid and solution state conformation of these compounds was assessed by X-ray crystallography and NMR. Ab initio calculations were also carried out to model the conformation of erythro- and threo- 1,2-difluoro-1,2-diphenylethane as these differed from the 2,3-difluorosuccinates. CONCLUSION: In general the overall chain conformations of the 2,3-difluorosuccinates diastereoisomers were found to be influenced by the fluorine gauche effect. The study highlights the prospects of utilising the vicinal difluorine motif (RCHF-CHFR) as a tool for influencing the conformation of performance organic molecules and particularly tuning conformation by selecting specific diastereoisomers (erythro or threo).

Journal Article↗
PubMed2006

Comparative analyses of a family of potential self-replicators: the subtle interplay between molecular structure and the efficacy of self-replication.

It is envisioned that protocols based on self-replication will emerge as a formidable synthetic apparatus for the production of nanoscale assemblies through molecular structures that are capable of automultiplication with high reaction rates and selectivities. To achieve this goal, a complete understanding of the relationship between molecular structure and replication efficiency is necessary. Rigorous experimental and theoretical analyses of a series of self-complementary scaffolds that are intimately related in a constitutional sense, manufactured through the Diels-Alder reaction of complementary subunits, were undertaken. Experimental and computational methods were employed to map the key determinants that dictate the emergence of self-replicative function, as well as the efficiency, rate and selectivity of the self-replicative processes.

Crystallography, X-Ray↗
PubMed2006

Investigations on organo-sulfur-nitrogen rings and the thiocyanogen Polymer, (SCN)x.

The synthesis and full characterisation of a series of 1,2,4-thiadiazoles is reported. (SCN)(x) has been studied by a variety of techniques and the data compared with 1,2,4-thiadiazole and 1,2,4-dithiazoles. The observed data suggest that the polymer consists of 1,2,4-dithiazole rings linked by nitrogen atoms. For (SCN)(x), the MALDI-TOF mass spectroscopy showed a parent ion at 1149 and a series of peaks with (SCN)(2) repeat units (116 m/z); this result implies that (SCN)(2) may be the monomer unit of the polymer. Its IR spectrum shows a very broad peak with maximum at 1134 cm(-1) consisting of several overlapping peaks in the same region as ring vibrations for 1,2,4-thiadiazole and 1,2,4-dithiazole compounds. Peaks in the Raman spectrum in the range 400-480 cm(-1) support the presence of disulfide units within the polymer. The solid-state (13)C NMR (99 % (13)C-labelled) spectrum is dominated by two singlets of equal intensity at approximately 187 and 184 ppm with low intensity peaks in the range 152-172 ppm, in approximately the same range as both 1,2,4-thiadiazoles and 1,2,4-dithiazoles. The solid-state (15)N NMR (99 % (15)N labelled) spectrum displays two major peaks of similar intensity at 236.9 and 197.2 ppm, which are clearly very different environments to those observed in bis(3-bromo-1,2,4-thiadiazol-5-yl) disulfide, but similar to 1,2,4-dithiazoles. The X-ray structures of seven C-S-N systems are reported. Preliminary studies on (SeCN)(x) suggest that literature references to this polymer may be in error with the red solid actually being red selenium.

Journal Article↗
PubMed2006

The preparation and characterisation of hetero- and homobimetallic complexes containing bridging naphthalene-1,8-dithiolato ligands.

Homo- and heterobimetallic complexes of the form [(PPh(3))(2)(mu(2)-1,8-S(2)-nap){ML(n)}] (in which (1,8-S(2)-nap)=naphtho-1,8-dithiolate and {ML(n)}={PtCl(2)} (1), {PtClMe} (2), {PtClPh} (3), {PtMe(2)} (4), {PtIMe(3)} (5) and {Mo(CO)(4)} (6)) were obtained by the addition of [PtCl(2)(NCPh)(2)], [PtClMe(cod)] (cod=1,5-cyclooctadiene), [PtClPh(cod)], [PtMe(2)(cod)], [{PtIMe(3)}(4)] and [Mo(CO)(4)(nbd)] (nbd=norbornadiene), respectively, to [Pt(PPh(3))(2)(1,8-S(2)-nap)]. Synthesis of cationic complexes was achieved by the addition of one or two equivalents of a halide abstractor, Ag[BF(4)] or Ag[ClO(4)], to [{Pt(mu-Cl)(mu-eta(2):eta(1)-C(3)H(5))}(4)], [{Pd(mu-Cl)(eta(3)-C(3)H(5))}(2)], [{IrCl(mu-Cl)(eta(5)-C(5)Me(5))}(2)] (in which C(5)Me(5)=Cp*=1,2,3,4,5-pentamethylcyclopentadienyl), [{RhCl(mu-Cl)(eta(5)-C(5)Me(5))}(2)], [PtCl(2)(PMe(2)Ph)(2)] and [{Rh(mu-Cl)(cod)}(2)] to give the appropriate coordinatively unsaturated species that, upon treatment with [(PPh(3))(2)Pt(1,8-S(2)-nap)], gave complexes of the form [(PPh(3))(2)(mu(2)-1,8-S(2)-nap){ML(n)}][X] (in which {ML(n)}[X]={Pt(eta(3)-C(3)H(5))}[ClO(4)] (7), {Pd(eta(3)-C(3)H(5))}[ClO(4)] (8), {IrCl(eta(5)-C(5)Me(5))}[ClO(4)] (9), {RhCl(eta(5)-C(5)Me(5))}[BF(4)] (10), {Pt(PMe(2)Ph)(2)}[ClO(4)](2) (11), {Rh(cod)}[ClO(4)] (12); the carbonyl complex {Rh(CO)(2)}[ClO(4)] (13) was formed by bubbling gaseous CO through a solution of 12. In all cases the naphtho-1,8-dithiolate ligand acts as a bridge between two metal centres to give a four-membered PtMS(2) ring (M=transition metal). All compounds were characterised spectroscopically. The X-ray structures of 5, 6, 7, 8, 10 and 12 reveal a binuclear PtMS(2) core with PtM distances ranging from 2.9630(8)-3.438(1) A for 8 and 5, respectively. The napS(2) mean plane is tilted with respect to the PtP(2)S(2) coordination plane, with dihedral angles in the range 49.7-76.1 degrees and the degree of tilting being related to the PtM distance and the coordination number of M. The sum of the Pt(1)coordination plane/napS(2) angle, a, and the Pt(1)coordination plane/M(2)coordination plane angle, b, a+b, is close to 120 degrees in nearly all cases. This suggests that electronic effects play a significant role in these binuclear systems.

Journal Article↗
PubMed2006

Total synthesis of stephanotic acid methyl ester.

[structure: see text]The methyl ester of the naturally occurring macrocyclic pentapeptide stephanotic acid, containing an unusual beta-substituted alpha-amino acid with a tryptophan C-6 to leucine beta-carbon link, has been synthesized. The key steps include the formation of this amino acid through a thioxo-oxazolidine intermediate and a Horner-Wadsworth-Emmons reaction using a phosphonoglycine, derived by a dirhodium(II)-catalyzed N-H insertion reaction, to give a dehydroamino acid and subsequent rhodium(I)-catalyzed asymmetric hydrogenation to introduce the modified tryptophan residue.

Amino Acids↗
PubMed2006

1,8-Dimethylnaphthalene-bridged diphosphine ligands: synthesis and structural comparison of their palladium complexes.

The synthesis of a new series of ligands with a 1,8-dimethylnaphthalene backbone is reported, 1,8-(R2PCH2)2C10H6, where R = (t)Bu 1 (dbpn), (i)Pr 2 (dippn), Cy 3 (dchpn) and Ph 4 (dphpn). The ligand 1 is structurally characterised by X-ray crystallography. A comparative structural study of the respective (diphosphine)Pd(dba) and (diphosphine)PdCl2 complexes is carried out, comparing the X-ray crystal structures of complexes 6, 7, 8, 10, 11 and 12. It is shown that the geometry at the metal is affected by not only ligand demands, but also by the palladium oxidation state and the electronic properties of the ligands. Two qualitative stability series are also identified: 9 < 10 < 11 approximately 12 is observed, and P2Pd(dba) complexes are more stable than the corresponding P2PdCl2 complexes towards opening of the chelate ring. It is also concluded that the bite angle is heavily influenced by the electron donating properties of the ligand.

Journal Article↗
PubMed2006

Synthesis and characterisation of four- and six-membered P-Se heterocycles.

The preparation, spectroscopic characterisation and crystal structures of [FcP(mu-Se)Se]2, [FcP(mu-Se2)Se]2 and [PhP(mu-Se2)Se]2 are reported. Crystallographic data reveal planar four-membered PSePSe and skewed six-membered P2Se4 rings, respectively, in all cases with trans arrangement of organic substituents and exo selenium atoms. Whilst stable at room temperature in solid state, NMR data suggest the six-membered rings of both the ferrocenyl and phenyl compounds decompose in the solution with loss of red selenium, forming PSe2PSe five-membered rings.

Journal Article↗
PubMed2006

Preparation and structures of 1,2-dihydro-1,2-diphosphaacenaphthylenes and rigid backbone stabilized triphosphenium cation.

The effect of the special peri-geometry of rigid naphthalene-1,8-diyl backbone in phosphenium formation reaction was investigated. 1,8-Bis(diphenylphosphino) naphthalene and P2I4 afforded triphosphenium iodide in a clean reaction. The reaction of 1,8-bis(dimethylaminophosphino) naphthalene with P2I4 is complex, it afforded four products, all containing the 1,2-dihydro-1,2-diphosphaacenaphthylene motif and heterophosphonium functionalities. Two examples of the rare structural motif of two acenaphthylene units connected head to head and thus a contiguous chain of four phosphorus atoms were also isolated, one compound showing diastereomerization in the solution. All new compounds were fully characterised including single crystal X-ray diffraction.

Journal Article↗
PubMed2006

E2(CN)2 (E = S, Se) and related compounds.

A synthetic, spectroscopic, and theoretical study of Ex(CN)2 (E = S, Se; x = 1-3) is described. The X-ray structures of Se2(CN)2 and Se3(CN)2 have been determined. Se2(CN)2 crystallizes in a chiral space group with the CN groups approximately gauche.

Journal Article↗
PubMed2006

Platinum complexes of dibenzo[1,2]dithiin, dibenzo[1,2]dithiin oxides and related polyaromatic hydrocarbon ligands.

The synthesis of platinum bisphosphine complexes of biphenyl- 2,2'-dichalcogenates and the oxides of dibenzo[1,2]dithiin and related ligand systems by oxidative addition to [Pt(PPh(3))(4)] is reported. We also describe the synthesis of a new compound, dibenzothiophen-4-yldiselenide and its simple platinum complex (obtained by oxidative addition). All complexes have been fully characterised, principally by using multinuclear NMR spectroscopy and in six cases by means of single-crystal X-ray diffraction studies. The majority are simple S/S or Se/Se complexes, however the addition of dibenzo[1,2]dithiin trioxide to [Pt(PPh(3))(4)] gives a bimetallic system, [Pt[2-[S(O)],2'-[S(O)(2)]-biphen}(PPh(3))](2), containing a central Pt(2)S(2)O(2) core in which the ligand behaves as a tridentate S,S,O donor.

Journal Article↗
PubMed2006

Inhibition of Hsp90 with synthetic macrolactones: synthesis and structural and biological evaluation of ring and conformational analogs of radicicol.

A series of benzo-macrolactones of varying ring size and conformation has been prepared by chemical synthesis and evaluated by structural and biological techniques. Thus, 12- to 16-membered lactones were obtained by concise routes, involving ring-closing metathesis as a key step. In enzyme assays, the 13-, 15-, and 16-membered analogs are good inhibitors, suggesting that they can adopt the required conformation to fit in the ATP-binding site. This was confirmed by cocrystallization of 13-, 14-, and 15-membered lactones with the N-terminal domain of yeast Hsp90, showing that they bind similarly to the "natural" 14-membered radicicol. The most active compounds in the ATPase assays also showed the greatest growth-inhibitory potency in HCT116 human colon cancer cells and the established molecular signature of Hsp90 inhibition, i.e., depletion of client proteins with upregulation of Hsp70.

Adenosine Triphosphatases↗
PubMed2005

[M(R-dmet)2] bis(1,2-dithiolenes): a promising new class intermediate between [M(dmit)2] and [M(R,R'-timdt)2] (M = Ni, Pd, Pt).

We report the first examples of metal dithiolenes belonging to the class [M(R-dmet)(2)] [R-dmet = formally monoreduced N-substituted thiazolidine-2,4,5-trithione; R = Et, M = Ni (1), Pd (2), Pt (3)]. A comparative spectroscopic, electrochemical, and density functional theory theoretical investigation indicates that [M(R-dmet)(2)] complexes show features intermediate between those of the dithiolenes belonging to the previously reported classes [M(R,R'-timdt)(2)] and [M(dmit)(2)] (R,R'-timdt = formally monoreduced N,N'-disubstituted imidazolidine-2,4,5-trithione; dmit = 2-thioxo-1,3-dithiole-4,5-dithiolato). UV-vis-near-IR spectroscopy and cyclic voltammetry/differential pulsed voltammetry measurements performed on 1 and 3 proved that the new dithiolenes are stable as neutral, monoanionic, and bianionic species and feature a near-IR electrochromic absorption falling at about 1000 and 1250 nm for neutral and monoanionic species, respectively.

Journal Article↗