Biomedical subjects

Alan H Tkaczyk

Publications and source records attributed to Alan H Tkaczyk.

4 recordsLinked to original sources

PubMed2006

Electrowetting of ionic liquids.

We have successfully demonstrated that imidazolium- and pyrrolidinium-based commercial room-temperature ionic liquids can electrowet (with a dc voltage) a smooth fluoropolymer (Teflon AF1600) surface. Qualitatively, the process is analogous to the electrowetting of aqueous electrolyte solutions: the contact angle versus voltage curve has a parabolic shape which saturates at larger voltages (positive or negative). On the other hand we observed several peculiarities: (i) the efficiency is significantly lower (by about an order of magnitude); (ii) the influence of the bulky cation is larger and the importance of the smaller anion is lesser, especially with respect to electrowetting saturation; (iii) there is an asymmetry in the saturation contact angles found for positive and negative voltages. The asymmetry may be correlated with the cation-anion asymmetry of the ionic liquids. The low efficiency may be caused by the presence of water and other impurities in these commercial materials.

Electrochemistry↗

PubMed2005

Vibrations-determined properties of green fluorescent protein.

The physicochemical characteristics of the green fluorescent protein (GFP), including the thermodynamic properties (entropy, enthalpy, Gibbs' free energy, heat capacity), normal mode vibrations, and atomic fluctuations, were investigated. The Gaussian 03 computational chemistry program was employed for normal mode analysis using the AMBER force field. The thermodynamic parameters and atomic fluctuations were then calculated from the vibrational eigenvalues (frequencies) and eigenvectors. The regions of highest rigidity were shown to be the beta-sheet barrel with the central alpha-helix, which bears the chromophore. The most flexible parts of the GFP molecule were the outlying loops that cover the top and bottom of the beta-barrel. This way, the balance between rigidity and flexibility is maintained, which is the optimal relationship for protein stability in terms of Gibbs' free energy. This dual-schemed structure satisfies the requirements for GFP function. In this sense, the structure of GFP resembles a nanoscale drum: a stiff cylinder with flexible vibrating end(s).

Animals↗

PubMed2003

Reversible switching of high-speed air-liquid two-phase flows using electrowetting-assisted flow-pattern change.

This work is the first demonstration of electrical modulation of surface energy to reversibly switch dynamic high-speed gas-liquid two-phase microfluidic flow patterns. Manipulation of dynamic two-phase systems with continuous high-speed flows is complex and interesting due to the multiple types of forces that need to be considered. Here, distinct stable flow patterns are formed through a multipronged approach: both surface tension forces generated by surface chemistry modulation as well as viscous and inertial forces produced by fluid flows are employed. The novel fluidic actuation mechanism provides insights into better understanding microscale two-phase flow dynamics and offers new opportunities for the development of two-phase biochemical microsystems that are mechanically simple and operational at high speeds.

Air↗

PubMed2003

Micro- and nanotechnologies for studying cellular function.

The study of complex biological systems requires methods to perturb the system in complex yet controlled ways to elucidate mechanisms and dynamic interactions, and to recreate in vivo conditions in flexible in vitro set-ups. This paper reviews recent advances in the use of micro- and nanotechnologies in the study of complex biological systems and the advantages they provide in these two areas. Particularly useful for controlling the chemical and mechanical microenvironments of cells is a set of techniques called soft lithography, whereby elastomeric materials are used to transfer and generate micro- and nanoscale patterns. Examples of some of the capabilities of soft lithography include the use of elastomeric stamps to generate micropatterns of protein and the use of elastomeric channels to localize chemicals with subcellular spatial resolutions. These types of biological micro- and nanotechnologies combined with mathematical modeling will propel our understandings of cellular and subcellular physiology to new heights.

Animals↗