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Abhik Ghosh

Publications and source records attributed to Abhik Ghosh.

32 records · Page 2Linked to original sources

Beta-octafluorocorroles.

The one-pot corrole synthesis first reported by the Gross and Paolesse groups appears to have evolved into a remarkably general and predictable self-assembly based synthetic reaction. Gross's solvent-free procedure (refs 8 and 9) has proven particularly effective in our hands and, in fact, more general than originally claimed. In earlier work (ref 17), we showed that the reaction works for a variety of aromatic aldehyde starting materials and was not limited to relatively electron-deficient aldehydes, as reported by Gross and co-workers. Here, we show that the pyrrole component is also variable in that 3,4-difluoropyrrole undergoes oxidative condensation with four different p-X-substituted benzaldehydes to yield the corresponding beta-octafluoro-meso-tris(para-X-phenyl)corroles (X = CF3, H, CH3, and OCH3). Further, we have prepared the Cu and FeCl derivatives of the beta-octafluorocorrole ligands. The XPS nitrogen 1s ionization potentials of these fluorinated ligands are some 0.7 eV higher than those of the corresponding beta-unfluorinated ligands. The oxidation half-wave potentials of the Cu and FeCl complexes of the fluorinated corroles are also positively shifted by 300-400 mV relative to their beta-unsubstituted analogues, demonstrating the strongly electron-deficient character of the fluorinated ligands. 1H NMR spectroscopy suggests that like their beta-unfluorinated counterparts, the new beta-octafluorinated triarylcorroles act as substantially noninnocent ligands, i.e., exhibit corrole pi-cation radical character, in the FeCl complexes. Quantitatively, however, NMR spectroscopy and DFT calculations indicate that the beta-octafluorinated corroles are somewhat less noninnocent (i.e., carry less radical character) than their beta-unfluorinated counterparts in the FeCl complexes. Temperature-dependent 19F NMR spectroscopy suggests that the Cu octafluorocorroles have a thermally accessible paramagnetic excited state, which we assign as a Cu(II) corrole pi-cation radical. We have previously reported that the electronic absorption spectra, particularly the Soret absorption maxima, of high-valent transition metal triarylcorroles are very sensitive to the nature of the substituents in the meso positions. In contrast, the Soret absorption maxima of free-base triarylcorroles are not particularly sensitive to the nature of the meso substituents. This scenario also holds for the fluorinated corroles described here. Thus, although the four free-base fluorinated triarylcorroles exhibit practically identical Soret absorption maxima, the Soret bands of the Cu derivatives of the same corroles red-shift by approximately 35 nm on going from the p-CF3 to the p-OCH3 derivative.

Journal Article↗

Molecular structure and conformation of dinitrosylheme.

DFT calculations indicate a surprisingly strong cis orientational preference of the two NO ligands of dinitrosylheme, a unique reactive species of potential biological relevance that has been recently generated and spectroscopically characterized at low temperature. While a trans centrosymmetric conformation has been proposed on the basis of IR spectroscopic data, DFT calculations favor a cis C2v conformation of the two NOs over a trans orientation by about 20 kcal/mol.

Heme↗

Ab initio multiconfiguration reference perturbation theory calculations on the energetics of low-energy spin states of iron(III) porphyrins.

Although a major goal of inorganic spectroscopy is to determine the energetics of the low-lying spin states of transition metal complexes, surprisingly little has been accomplished in this respect by means of accurate ab initio calculations. Against this context, we present ab initio multiconfiguration reference perturbation theory (CASPT2) calculations with large basis sets on the low-lying spin states of Fe(III)(P)Cl and [Fe(P)Cl](+) (P(2-)=porphinato). The CASPT2 results on the energetics of various low-lying spin states studied differ significantly, sometimes even dramatically, from those obtained from density functional theory calculations.

Chemical Phenomena↗

High-level ab initio calculations on the energetics of low-lying spin states of biologically relevant transition metal complexes: a first progress report.

Although DFT is the unrivaled method of choice for quantum chemical studies of bioinorganic problems, little is known about its ability to predict the energetics of the low-lying electronic states of transition metal complexes. The first high-level ab initio calculations aimed at calibrating DFT vis-a-vis this issue indicate that, despite its many successes, DFT is far from infallible. In the short term, additional calibration of DFT against more elaborate ab initio methods remains an important goal for computational bioinorganic researchers. In the longer term, we are optimistic that high-level ab initio methods such as CASPT2 and CCSD(T) will be regularly used to study realistic molecules of genuine biochemical interest.

Electrons↗

High-valent transition metal centers versus noninnocent ligands in metallocorroles: insights from electrochemistry and implications for high-valent heme protein intermediates.

For relatively electron-rich corrole ligands, the halfwave potentials for oxidation of Cu(III), Sn(IV)Ph, Fe(IV)Ph, and Fe(IV)-O-Fe(IV) complexes are significantly lower than those of Sn(IV)Cl, Fe(IV)Cl, Mn(IV)Cl, and Cr(V)(O) complexes, suggesting that the corrole ligand is relatively electron-rich or 'innocent' in the former group of complexes and that it is relatively electron-deficient or 'noninnocent' in the latter group. Both the formal charge of the central metal ion and the nature of the axial ligand, if any, appear to be key determinants of the electronic character of the corrole ligand in metallocorrole complexes, a theme that has interesting resonances with recent findings on high-valent heme protein intermediates. However, for very strongly electron-deficient ligands such as meso-tris(pentafluorophenyl)corrole (TPFPC) and beta-octabromo-meso-tris(pentafluorophenyl)corrole (Br(8)TPFPC), which cannot sustain significant radical character, the various metal complexes all exhibit comparable halfwave potentials for oxidation and the ligand may be considered to be relatively innocent.

Electrochemistry↗

Electronic absorption, resonance Raman, and electrochemical studies of planar and saddled copper(III) meso-triarylcorroles. Highly substituent-sensitive Soret bands as a distinctive feature of high-valent transition metal corroles.

We present here a first systematic study of substituent effects in metallocorroles, based on electronic absorption, resonance Raman (RR), and infrared (IR) spectroscopic studies and electrochemical measurements on 10 copper(III) meso-triarylcorroles, Cu(III)[beta-Y(8)TArC], where the beta-substituent Y = H or Br and the meso-aryl group Ar = C(6)F(5) or p-X-C(6)H(4) and X = CF(3), H, CH(3), and OCH(3). The results afford a number of significant inisights. (1) The RR (and IR) results show that at least two and possibly more high-frequency bands in the 1400-1550 cm(-1) region exhibit significant frequency downshifts on beta-octabromination and, thus, qualify as structure-sensitive marker bands. DFT geometry optimizations indicate that the saddled conformation should be clearly preferred for the beta-octabromo-meso-triarylcorrole derivatives studied and that beta-octabromination results in expansion of a number of skeletal bond distances of the corrole macrocycle, consistent with observed frequency downshifts. (2) Electrochemical measurements on planar Cu(III)[TArC] derivatives have shown that the para substituents on the meso-aryl groups exert a strong influence on the half-wave potentials for oxidation (rho(ox) = DeltaE(1/2ox)/Delta(3sigma) = 95 mV), suggesting that oxidation involves removal of an electron from the corrole "b(1)" HOMO, which has significant amplitudes at the meso postions and crudely resembles a porphyrin a(2u) HOMO in shape. In contrast, the Hammett rho(ox) is much lower for the nonplanar Cu(III)[Br(8)TArC] derivatives and we suggest that this ultimately results from a b(1)-to-a(2) HOMO reversal which in turn stems from a metal (d(x2-y2)-corrole ("b(1)") orbital interaction that becomes symmetry-allowed under a saddle distortion of the corrole macrocycle. In contrast to what has been observed for metallotetraphenylporphyrins, beta-octabromination dramatically raises the half-wave potential for one-electron oxidation of the triarylcorrole derivatives studied. This appears to be due to the fact that both the "a(2)" and "b(1)" HOMOs of a corrole (in C(2v) notation) have significantly higher amplitudes at the beta positions, compared to a porphyrin a(2u) HOMO. Thus, although many metallocorroles are significantly more easily oxidizable than analogous metalloporphyrins, certain beta-octahalogeno-meso-triarylcorrole derivatives can indeed be extremely electron deficient and oxidation resistant and may, therefore, find use as rugged catalysts or reagents under highly oxidizing conditions. (3) Finally, the Soret absorption maxima of high-valent metallotriarylcorroles exhibit a uniquely sensitive dependence on the substituents on the meso-aryl groups. Thus, on going from Cu(III)[T(p-CF(3)-P)C] (T(p-CF(3)-P)C = meso-tris((p-trifluoromethyl)phenyl)corrolato) to Cu(III)[T(p-OM-P)C] (T(p-OM-P)C = meso-tris(p-methoxyphenyl)corrolato), the Soret maximum red shifts by 26 nm, from 407 to 433 nm. Similarly, on going from Cu(III)[Br(8)T(p-CF(3)-P)C] (Br(8)T(p-CF(3)-P)C = beta-octabromo-meso-tris((p-trifluoromethyl)phenyl)corrolato) to Cu(III)[Br(8)T(p-OM-P)C] (Br(8)T(p-CF(3)-P)C = beta-octabromo-meso-tris(p-methoxyphenyl)corrolato), the Soret maximum red shifts by 34 nm, from 434 to 468 nm. Time-dependent DFT calculations suggest that this substituent dependence reflects significant ligand-to-metal charge-transfer character of certain transitions in the Soret region. The optical spectra of free-base and non-high-valent transition metal tetrapyrroles, in general, do not exhibit a similar substituent dependence.

Journal Article↗

Symmetry-breaking phenomena in metalloporphyrin pi-cation radicals.

Density functional theory (DFT) calculations of the energetics, molecular structures, and spin density profiles of metalloporphyrin pi-cation radicals suggest that the common practice of describing these radicals in terms of a universal A(1u)/A(2u) dichotomy is often not justified, confirming a possibility first foreseen by Prendergast and Spiro (ref 15) over a decade ago on the basis of vibrational spectroscopy and semiempirical calculations. Because of near-degeneracy of the a(1u) and a(2u) HOMOs of many metalloporphyrins, the cation radicals derived from these compounds undergo a pseudo-Jahn-Teller (pJT) distortion and are, therefore, best described as (2)A(u) with reference to the C(4h) point group, rather than as (2)A(1u) (D(4h) or (2)A(2u) (D(4h)). We find that the porphyrin cation radicals undergo a pJT distortion if the energy difference between the (2)A(1u) and (2)A(2u) pi-cation radicals, optimized under D(4h) symmetry constraints, is less than 0.15 eV. According to this criterion, metallo-porphine and metallo-OEP pi-cation radicals should always be pJT-distorted and metallo-meso-tetrahalogenoporphyrin radicals should not. For [Zn(TPP(*))](+), the (2)A(1u)/(2)A(2u) energy difference is almost exactly at the threshold of 0.15 eV, consistent with the experimental observation of both symmetry-broken and undistorted structures for this species. The (2)A(1u)/(2)A(2u) energy difference (when the molecular geometries are optimized under a D(4h) symmetry constraint) also appears to govern whether the real pJT-distorted cation radical is more A(1u)- or A(2u)-like in terms of its spin density profile. Because many metalloporphyrin pi-cation radicals exist as cofacial dimers in the crystalline phase, we examined the symmetries and structures of the model compounds [[Zn(P)](2)](+,2+) by means of DFT geometry optimizations. The results showed that dimerization has relatively little impact on the bond length alternation in the individual rings. A final interesting result, consistent with experiment, is that the bond length alternation in the delocalized mixed-valence dimer [[Zn(P)](2)](+) is about half that found for [[Zn(P)](2)](2+).

Cations↗

Electronic structure of high-valent transition metal corrolazine complexes. The young and innocent?

This is a first quantum chemical study of corrolazine complexes. DFT calculations suggest that despite their extremely contracted central cavities, compared with porphyrins, a variety of corrolazine complexes may be expected to exist as stable compounds. The calculations also indicate that corrolazine complexes may be regarded as strongly electron-deficient analogues of corrole complexes. Thus, the calculated valence ionization potentials of P(V) and Cu(III) corrolazine derivatives are dramatically higher than those of analogous corrole derivatives. In addition, DFT calculations on Fe(IV) and Mn(IV) corrole and corrolazine derivatives suggest that compared with the often noninnocent corrole ligands, corrolazines are electronically more innocent and stabilize "purer" high-valent states of transition metal ions.

Journal Article↗

Do nonplanar distortions of porphyrins bring about strongly red-shifted electronic spectra? Controversy, consensus, new developments, and relevance to chelatases.

TDDFT calculations confirm a controversial proposal by DiMagno and co-workers that ruffling distortions, by themselves, do not bring about sizable red shifts in the electronic absorption spectra of "simple" nontransition-metal porphyrins. We now report that the same also holds for saddling distortions. The situation is more complex for transition metal porphyrins. For example, ruffling does bring about strong red shifts in the electronic spectra of nickel porphyrins because of a specific metal(d)-porphyrin(pi) orbital interaction.

Metalloporphyrins↗

"True" iron(V) and iron(VI) porphyrins: a first theoretical exploration.

We present here a first theoretical characterization of iron(V) (S = (3)/(2)) and iron(VI) (S = 0) porphyrin intermediates. The Fe(V) calculations exhibit exceptionally narrow convergence radii and we believe that for this reason they have long eluded researchers working on high-valent iron intermediates. The Fe(V)-N(nitrido) bond distance in the DFT(PW91/TZP) optimized geometry of Fe(V)(P)(N) is 1.722 A, comparable to and slightly longer than the Fe(IV)-O bond distance of 1.684 A in Fe(IV)(P)(O) and the Fe(IV)-N(imido) bond distance of 1.698 A in Fe(IV)(P)(NH). In contrast, the Fe(VI)-N(nitrido) bond distances in [Fe(VI)(P)(N)](+) (S = 0) and Fe(VI)(P)(N)(F) (S = 0) are dramatically shorter, 1.508 and 1.533 A, respectively, consistent with the formal triple bond character of the Fe(VI)-N(nitrido) bond. The nitrido ligand appears to be uniquely capable of stabilizing a "true" Fe(V) center, in the sense defined in the paper. All three unpaired electrons in Fe(V)(P)(N) are completely localized on the Fe(V)-N(nitrido) axis, with the Fe and N gross atomic spin populations being 1.579 and 1.550, respectively. In contrast, an axial ligand set consisting of an oxide and a fluoride do not stabilize an Fe(V) ground state but favor an electronic structure best described as an Fe(IV)-oxo porphyrin pi-cation radical.

Heme↗

Resonance Raman spectroscopy and density functional theoretical calculations of manganese corroles. A parallelism between high-valent metallocorroles and metalloporphyrins, relevant to horseradish peroxidase and chloroperoxidase compound I and II intermediates.

Soret-excited resonance Raman (RR) spectra are reported for the Mn(III) and Mn(IV)Cl derivatives of meso-tris(p-(trifluoromethyl)phenyl)corrole, H(3)T(p-CF(3)-P)Cor, and the Mn(III) derivative of beta-octabromo-meso-tris(p-(trifluoromethyl)phenyl)corrole, H(3)Br(8)T(p-CF(3)-P)Cor. Three high-frequency bands in the RR spectrum of Mn(III)[T(p-CF(3)-P)Cor] at 1465, 1524 and 1615 cm(-1) appear to upshift to 1486, 1528 and 1620 cm(-1) for Mn(IV)[T(p-CF(3)-P)Cor]Cl. This suggests that the electronic character of the corrole ligand is significantly different for these two compounds, which is consistent with electrochemical evidence for partial radical character of the corrole ligand for Mn(IV)[T(p-CF(3)-P)Cor]Cl but not for Mn(III)[T(p-CF(3)-P)Cor]. The observed upshifts are also consistent with DFT calculations showing a shortening of some of the relevant bonds in the Mn(IV)Cl derivative relative to the Mn(III) derivative. The results raise the possibility of an extensive parallelism between the electronic structures of high-valent metallocorroles and metalloporphyrins. Three high-frequency bands in the RR spectrum of Mn(III)[T(p-CF(3)-P)Cor] at 1331, 1465 and 1545 cm(-1) appear to downshift to 1320, 1457 and 1537 cm(-1) for Mn(III)[Br(8)T(p-CF(3)-P)Cor]. This is consistent with the suspected longer carbon-carbon bond lengths in the brominated corrole macrocycle.

Chloride Peroxidase↗