Biomedical subjects

Aaron Fenster

Publications and source records attributed to Aaron Fenster.

41 records · Page 3Linked to original sources

PubMed2003

A real-time biopsy needle segmentation technique using Hough transform.

Real-time needle segmentation and tracking is very important in image-guided surgery, biopsy, and therapy. Due to its robustness to the addition of extraneous noise, the Hough Transform is one of the most powerful line-detection techniques nowadays and has been widely used in different areas. Unfortunately, its high computation needs often prevent it from being applied in real-time applications without the help of specially designed hardware. In order to solve this problem, a variety of fast implementation algorithms have been proposed. However, none of them can be performed in a real time on an affordable computer. In this paper, we describe a fast implementation of the Hough Transform based on coarse-fine search and the determination of the optimal image resolution. Compared to conventional techniques, our approach decreases the time for needle segmentation by an order of magnitude. Experiments with agar phantom and patient breast biopsy ultrasound (US) image sequences showed that our approach can segment the biopsy needle in real time (i.e., less than 33 ms) on an affordable PC computer without the help of specially designed hardware with the angular rms error of about 1 degrees and the position rms error of about 0.5 mm.

Agar↗

PubMed2003

Measurement of carotid plaque and effect of vitamin therapy for total homocysteine.

BACKGROUND: Many new therapies are being developed that are anti-atherosclerotic, but which do not change clinical parameters such as blood pressure or cholesterol. In order to measure the effects of these therapies it will be necessary to measure atherosclerosis. Elevated levels of plasma total homocysteine (tHcy) are associated with increased risk of stroke and myocardial infarction. Measurement of the effect of vitamin therapy on atherosclerosis has therefore been used as an example of this approach. METHODS: 2-Dimensional measurement of carotid plaque cross-sectional area has been used to measure effects of vitamin therapy in patients whose plaque is progressing despite intensive treatment of traditional risk factors. In clinic patients, addition of vitamin therapy halted progression of atherosclerosis, in samples of 50 patients over 2.5 years. However, in patients randomized to high-dose vs. low-dose vitamins in the Vitamin Intervention for Stroke Prevention trial, no difference in plaque progression was seen between high-dose and low-dose vitamin therapy. New methods have been developed for the measurement of 3-dimensional plaque volume, and for the measurement of plaque surface roughness. RESULTS: The accuracy and reliability of the measurement of plaque volume is 95%. This will permit measurement of effects of new anti-atherosclerotic therapies with much smaller sample sizes, in a much shorter time, than previously available methods such as intima-media thickness. CONCLUSION: Measurement of atherosclerotic plaque volume and roughness will greatly enhance the study of new anti-atherosclerotic therapies.

Aged↗

PubMed2002

Comparison of core needle breast biopsy techniques: freehand versus three-dimensional US guidance.

RATIONALE AND OBJECTIVES: No single method is generally accepted for evaluating the accuracy of breast biopsy techniques before their clinical implementation. The purpose of this study was to test a new process for evaluating biopsy techniques by using it in the evaluation of a prototype three-dimensional ultrasound (US)-guided biopsy device. MATERIALS AND METHODS: The biopsy accuracy of a new three-dimensional US-guided breast biopsy device was compared to that of the accepted clinical practice of biopsy by expert radiologists with two-dimensional freehand US guidance. Biopsies were performed in chicken tissue phantoms containing 3.2-mm lesions made of poly(vinyl alcohol) cryogel. The criterion for a successful biopsy was the presence of lesion in the sample. The equivalence limit difference tested was 10% by using a power of 90% and a two-sided test significance level, a, of 10%. RESULTS: The biopsy success rate of the three-dimensional US-guided system (96%) was equivalent to that of expert radiologists using two-dimensional freehand US guidance (94.5%) in tissue phantoms containing poly(vinyl alcohol) cryogel lesions. CONCLUSION: This evaluation procedure is a valuable precursor to clinical trials in the assessment of biopsy techniques. The three-dimensional US-guided breast biopsy system provides a suitable alternative to two-dimensional freehand US guidance for biopsy of breast cancer.

Animals↗

PubMed2002

Theoretical and experimental quantification of carotid plaque volume measurements made by three-dimensional ultrasound using test phantoms.

An accurate technique that exhibits low variability has practical importance for the quantification of carotid plaque volume. Such a technique is necessary to monitor plaque progression or regression that may result in response to nonsurgical therapy. In this study, we investigate the accuracy and variability of plaque volume measurement by three-dimensional ultrasound using vascular plaque phantoms over a range of 68.2 mm3 to 285.5 mm3. The agar plaques maintained a consistent cylindrical geometry with variations in the height, length, and echogenicity. The volume of each plaque was determined by water displacement. The three-dimensional (3D) ultrasound (US) images were acquired with a mechanical scanning system which creates a 3D US Cartesian volume, that was manipulated and viewed in any orientation, from a collection of conventional parallel two-dimensional (2D) US images. The plaque volumes were measured by serial 2D manual planimtery. The mean accuracy in plaque volume measurement was 3.1+/-0.9%. Variability in plaque volume measurement was calculated to be 4.0+/-1.0% and 5.1+/-1.4% for intraobserver and interobserver measurements, respectively. We have also developed a theoretical description for the variance in measurement of plaque volume using manual planimetry. Root-mean-square difference between experimentally and theoretically determined values of plaque volume fractional variance was 9%.

Analysis of Variance↗

PubMed1999

Three dimensional transrectal ultrasound imaging of the prostate: initial experience with an emerging technology.

PURPOSE: A three-dimensional ultrasound system (3-D US) was evaluated for its clinical utility in transrectal prostate imaging, in comparison with the current standard 2-dimensional transrectal ultrasound (TRUS) imaging system. METHODS AND MATERIALS: The computer program developed in our laboratory was coupled with a commercially available ultrasound transducer. Geometric validation and volumetric assessment was performed with "stretched-string" wire models and solution-containing balloons respectively. Anatomic correlation of 3-D TRUS images was performed with cadaveric prostates. Intraprostatic lesion localization by 3D-TRUS was assessed clinically by 2 observers in 11 patients prior to radical prostatectomy and the data compared with those yielded by 2-D TRUS. RESULTS: Geometric assessment by 3D TRUS in comparison with the "between strings in the phantom" model (true dimensions) had an error of up to 1.2%. Volume measurement by 3-D TRUS had an error, compared to the true volume, of 0.9%. The correlation coefficient (r) was 0.99985 for the end-firing probe and 0.978 for side firing. The 3-D images provided accurate representation of the true anatomy in the sagittal, transverse and most uniquely, the coronal plane. Two observers achieved better diagnostic accuracies with intraprostatic abnormalities using 3-D instead of standard 2-D TRUS. The negative predictive value and the specificity were improved. CONCLUSION: 3-D TRUS appears to provided accurate representation of the true anatomy with geometric and volumetric validation. Areas of potential clinical application of 3-D TRUS include treatment monitoring with volume measurements and various intervention and therapeutic procedures for both benign and malignant prostatic disorders.

Journal Article↗