Biomedical subjects

A Ramos

Publications and source records attributed to A Ramos.

At least 19 recordsLinked to original sources

PubMed2006

Study of biochemical and microbiological parameters during composting of pine and eucalyptus bark.

To study the possibility of some residues from pulp and paper industry being used as substrates to produce seedlings in containers, three composting experiments were carried out using eucalyptus bark, pine bark and a mixture (60:40, v:v) of pine bark+eucalyptus bark. Biochemical parameters studied were: acid and alkaline phosphatases, lipase (C10), protease, urease, beta-glucosidase and total cellulases. The microbiological populations of total aerobic bacteria, total fungi, actinomycetes, nitrifying bacteria, cellulolytic bacteria and fungi were also evaluated. At the end of the process physicochemical characterization of composts was also performed. Results showed in general that the highest microbiological populations as well as for enzymatic activities occurred during the thermophilic phase (>40 degrees C) of the process. On the other hand and according to the physicochemical characteristics of composts pine bark is the most appropriate material to be used in the formulation of substrates to produce plants in containers.

Bacteria↗

PubMed2006

Ultrasonic characterization of granites obtained from industrial quarries of Extremadura (Spain).

The industry of ornamental rocks, such as granites, represents one of the most important industrial activities in the region of Extremadura, SW Spain. A detailed knowledge of the intrinsic properties of this natural stone and its environmental evolution is a required goal in order to fully characterize its quality. In this work, two independent NDT acoustic techniques have been used to measure the acoustic velocity of longitudinal waves in different prismatic granitic-samples of industrial quarries. A low-frequency transceiver set-up, based on a high-voltage BPV Steinkamp instrument and two 50 kHz probes, has been used to measure pulse travel times by ultrasonic through-transmission testing. In complementary fashion, an Erudite MK3 test equipment with an electromagnetic vibrator and two piezoelectric sensors has also been employed to measure ultrasonic velocity by means of a resonance-based method, using the same types of granite varieties. In addition, a comprehensive set of physical/mechanical properties have also been analyzed, according to Spanish regulations in force, by means of alternative methods including destructive techniques such as strength, porosity, absorption, etc. A large number of samples, representing the most important varieties of granites from quarries of Extremadura, have been analyzed using the above-mentioned procedures. Some results obtained by destructive techniques have been correlated with those found using ultrasonic techniques. Our experimental setting allowed a complementary characterization of granite samples and a thorough validation of the different techniques employed, thus providing the industry of ornamental rocks with a non-destructive tool that will facilitate a more detailed insight on the properties of the rocks under study.

Journal Article↗

PubMed2006

Noise reduction in ultrasonic NDT using undecimated wavelet transforms.

Translation-invariant wavelet processing is applied to grain noise reduction in ultrasonic non-destructive testing of materials. In particular, the undecimated wavelet transform (UWT), which is essentially a discrete wavelet transform (DWT) that avoids decimation, is used. Two different UWT processors have been specifically developed for that purpose, based on two UWT implementation schemes: the "à trous" algorithm and the cycle-spinning scheme. The performance of these two UWT processors is compared with that of a classical DWT processor, by using synthetic grain noise registers and experimental pulse-echo NDT traces. The synthetic ultrasonic traces have been generated by an own-developed frequency-domain model that includes frequency dependence in both material attenuation and scattering. The experimental ultrasonic traces have been obtained by inspecting a piece of carbon-fiber reinforced plastic composite in which we have mechanized artificial flaws. Decomposition level-dependent thresholds, which are suitable for correlated noise, are specifically determined in all cases. Soft thresholding, Daubechies db6 mother wavelet and the three well-known threshold selection rules, Universal, Minimax and SURE, are applied to the different decomposition levels. The performance of the different de-noising procedures for single echo detection has been comparatively evaluated in terms of signal-to-noise ratio enhancement.

Journal Article↗

PubMed2006

PSpice circuital modelling of ultrasonic imaging transceivers including frequency-dependent acoustic losses and signal distortions in electronic stages.

A new global circuital model is proposed taking into account some piezoelectric and electronic non-ideal aspects of the broadband ultrasonic transceivers used in NDT and imaging applications. A quadratic approach, alternative to previous linear Spice implementations, is proposed for the frequency dependence of the mechanical losses into the piezoelectric sections. Non-ideal frequency-dependent electrical effects influencing excitation circuitry performance, and attenuations in the propagation medium varying with frequency, are also considered. Results calculated, by using PSpice implementations, from conventional and the new modelling approaches show how the quadratic option to calculate losses clearly reduces the rippled and sharpened waveforms typically originated in many echo-signals simulations, and which are not observed in real measured responses. Experimental waveforms for driving spikes and for echo-signals, in very good agreement with responses simulated from the new modelling here proposed, are also shown.

Journal Article↗

PubMed2006

Tetrahedral versus hexahedral finite elements in numerical modelling of the proximal femur.

The objective of this study was to evaluate and compare tetrahedral and hexahedral finite element meshes of simplified and realistic proximal intact femur geometries. Theoretical expressions of stresses and strains were derived for the simplified model of the femur. For the analysis of the realistic geometry of the proximal femur, a CAD model of the third generation composite femur (Pacific Research Labs, Vashion Island, WA) was used and simulations were performed with Hyperworks (Altair Engineering, Inc., Troy, MI) finite element analysis software. Convergence tests with hexahedral (8- and 20-node brick-elements) and tetrahedral (4- and 10-node tetrahedrons) elements were analysed by comparing the periosteal von Mises stresses and principal strains at a selected point of the femur. The numerical periosteal strains were also compared with experimental ones to determine the accuracy of the finite elements. Overall, we concluded, for the simplified femur, that tetrahedral linear element allowed results more closely to theoretical ones, but hexahedral quadratic elements seem to be more stable and less influenced to the degree of refinement (NDOF) of the mesh. It was not possible to correlate these findings with those observed for the realistic proximal femur simulations where no significant differences were seen using refined meshes, with more than NDOF=20,000 for hexahedral elements.

Algorithms↗

PubMed2006

[Analysis of the cochlear implant as a treatment technique for profound hearing loss in pre and postlocutive patients].

INTRODUCTION: These are the objectives planned for this study: 1. Evaluate the results from the communication point of view. 2. Evaluate the cochlear implant (CI) impact on the quality of life. 3. Evaluate medical complications and technical failures. 4. Assess direct and indirect costs generated during the phases of a cochlear implantation programme. 5. Determine which factors have a high impact on the clinical evolution and the financial cost. MATERIALS AND METHOD: A population of 877 patients, postlingual and prelingual, adults and children, have been studied. They were treated in 5 Spanish centres with cochlear implant programmes. Audiometric tests and global questionnaires on life quality have been carried out. Medical and CI technology complications have also been computed. Direct and indirect economic costs of a cochlear implant have been calculated. RESULTS: Postlocutive-implanted patients reached the 40 dB SPL threshold in the Pure Tone Audiometry, and this result was maintained during the 12-year evolution. In Vowels test, it evolved from a 30% on pre-stimulation to 80-90%, in Disyllables words test it evolved from a 10% to a 50-60%, and in CID Sentences test it evolved from an 18% to a 60-70%. In the prelocutive population, results were influenced by the child's age at implantation. The best results were obtained by the children who had been implanted earlier. Those implanted between 0 and 3 years old evolved in the Vowels test from 0% during pre-stimulation to 95%, from a 0% to a 90% in Disyllables words test and from a 0% to a 90-95% in CID Sentences test. Also, the speech acquisition and development of the pre-locutive population was also influenced by the implantation age. An 80% of postlocutive adult patients stated a mood and sociability improvement after the cochlear implantation. They did not show health changes in general nor relevant modifications in the attention they usually received from relatives and friends. Severe medical-surgical complications were registered for a 3.42% of the cases, a 7.06% of mild medical-surgical complications and a 3.07% of technical breakdowns in the internal components of the CI. Financial cost of implantation for a post-locutive adult oscillated between 36,912 Euro and 37,048 Euro, and between 37,689 Euro and 44,273 Euro for a pre-locutive child. CONCLUSIONS: Cochlear implants clearly enhance communication skills of the implantees. Results obtained for the prelocutive implanted population justify the creation of hearing screening programmes in new-borns. Postlocutive implanted adults have expressed satisfaction for the results obtained. However, they did perceive some limitations in situations of unfavourable acoustic conditions. An analysis of direct and indirect costs related to a CI programme has been made. It may be useful to carry out reports on the cost-benefit ratio in this field. The low index of complications observed shows which cochlear implant treatment technique complies with the adequate safety margins. The factors influencing the most in the evolution are: duration of hearing deprivation, age at implantation, cochlear anatomy and functionality of the auditory pathway, patient's and relative's motivation, and the coexistence of other handicaps associated to hearing losses.

Adolescent↗

PubMed2006

[Complications in cochlear implantation].

OBJECTIVE: The objective [corrected] of this paper is to present the surgical complications in cochlear implant, in a serie of 346 patients, submitted to surgery by the same surgical team with the subsequent control and follow-up for a long period of time. We show the description and the handling of each complication. MATERIAL AND METHODS: A follow-up was carried out on 346 cochlear implant patients by the same surgical team, from February 1993 to March 2004. The complications were assessed and their handling and follow-up is reported. The series includes 211 children and 135 adults. RESULTS: The complication rate was 9.8% (n = 34). The complications found were: Intraoperatory Complications: Cerebrospinal Fluid Leaks (CSF), 7; Facial nerve injury, 1; excessive thinning of the posterior wall, 2; inmediate post operatory complications: infection of the surgical wound, 4; post operatory persistent pain, 1; Tinnitus, 2; late complications: Mastoiditis, 2; extrusion of the stimulating receptor, 1; facial nerve stimulation, 5; late infections of the stimulation receptor, 2; technical failure of the implanted system, 7. Neither alteration or migration was found in the receptor placing. CONCLUSIONS: The cochlear implant surgery has a low morbility. We found no cases of meningitis due to this procedure.

Adult↗

PubMed2006

Analysis of community composition of biofilms in a submerged filter system for the removal of ammonia and phenol from industrial wastewater.

The bacterial diversity of a submerged filter, used for the removal of ammonia and phenol from an industrial wastewater with high salinity, was studied by a cultivation-independent approach based on PCR/TGGE (temperature-gradient gel electrophoresis). The wastewater treatment plant (laboratory scale) combined the nitrification and denitrification processes and consisted of two separated columns (one anoxic and one aerated) connected through a valve. The spatial diversity of bacterial communities in the plant biofilms was analysed by taking samples at four different heights in the system. TGGE profiles of PCR-amplified sequences of the 16 S rRNA gene (V3-hypervariable region) showed significant variations of the bacterial diversity, mainly depending on the concentration of O(2) along the system. Several bands separated by TGGE were reamplified and sequenced, in order to explore the composition of the microbial communities in the biofilms. Most of the sequenced bands (10 out of 13) were closely related to the 16 S rRNA gene of marine alpha-proteobacteria, mainly grouping in the periphery of the genus Roseobacter. Other sequences were related to those of gamma-proteobacteria, the nitrite oxidizer Nitrospira marina and anaerobic phenol-degrading bacteria of the Desulfobacteraceae.

Ammonia↗

PubMed2006

Aneurysm re-rupture during computed tomography angiography.

Re-rupture of cerebral aneurysms during conventional angiography, demonstrated by contrast leakage into the extravascular space, is well known and well documented. However, the occurrence of this complication during computed tomography (CT) angiographic examinations has rarely been published despite its extensive use. We present the clinical and radiological features of a rebleeding event during a CT angiographic study. No hemodynamic or contrast-related factors can be evoked predisposing to he occurrence of this complication during this imaging technique. This, along with the short study time, may explain the rarity of this coincidence.

Aneurysm, Ruptured↗

PubMed2006

Treatment of landfill leachate with aerated and non-aerated submerged biofilters.

A submerged biological filter packed with clayey schists from brick industrial waste as support material was used to treat landfill leachate. The pilot-scale plant consisted of two separated reactors, running in aerated and non-aerated conditions respectively. The leachate was taken from a landfill in Granada (southeast Spain) and was considered as partially stabilized with average chemical oxygen demand (COD) concentrations of 18,683.3 mg COD/L. The efficiency of the system at reducing COD, biological oxygen demand (BOD(5)), total suspended solids (TSS), total volatile solids (TVS), total solids (TS), cations and anions concentrations was tested comparing aerating and non-aerating conditions under several volumic organic loadings (15.7, 25.1 and 31.1 kg COD/m(3)d), a hydraulic loading of 0.7 m(3)/m(2)d and an internal recirculation of 250%. Results obtained showed that the aerated reactor was more effective than the non-aerated reactor in the removal of COD, BOD5 and TS, with maximum efficiencies of 66.7%, 91.2% and 21.7%, respectively. The volumic organic loading of 25.1 COD/m(3)d obtained best results. However, for the removal of TSS and TVS the non-aerated reactor showed better results (42%). The behaviour of different cations (Na(+), K(+), and Mg(2+)) and anions (F(-), Cl(-), Br(-)) was also monitored and a reduction in their concentration in the effluent was detected, in the order of 61% for Ca(2+) and 100% for F(-).

Air Movements↗

PubMed2006

Evidence for a female-specific effect of a chromosome 4 locus on anxiety-related behaviors and ethanol drinking in rats.

Previous studies using the inbred rat strains Lewis (LEW) and spontaneously hypertensive rats (SHR) led to the mapping of two quantitative trait loci, named Ofil1 (on chromosome 4 of the rat) and Ofil2 (on chromosome 7), for open-field inner locomotion, a behavioral index of anxiety. Studies using other strains showed that the region next to Ofil1 influences measures of not only anxiety but also ethanol consumption. In view of the high prevalence of psychiatric disorders such as anxiety and alcoholism, as well as the comorbidity between them, the present study was designed to better characterize the contribution of these two loci to complex emotional and consummatory responses. Rats deriving from an F2 intercross between the LEW and the SHR strains were selected according to their genotype at markers flanking the loci Ofil1 and Ofil2 and bred to obtain lines of rats homozygous LEW/LEW or SHR/SHR for each of the two loci, thus generating four genotypic combinations. These selected animals as well as purebred LEW and SHR rats of both sexes were submitted to a battery of tests including measures of locomotor activity, anxiety, sweet and bitter taste reinforcement and ethanol intake. Lewis rats displayed more anxiety-like behavior and less ethanol intake than SHR rats. Ofil1 (on chromosome 4) affected both the activity in the center of the open field and ethanol drinking in females only. These results suggest that Ofil1 contains either linked genes with independent influences on anxiety-related responses and ethanol drinking or a pleiotropic gene with simultaneous effects on both traits.

Alcohol Drinking↗

PubMed2006

Simulation of physiological loading in total hip replacements.

The determination of biomechanical force systems of implanted femurs to obtain adequate strain measurements has been neglected in many published studies. Due to geometric alterations induced by surgery and those inherent to the design of the prosthesis, the loading system changes because the lever arms are modified. This paper discusses the determination of adequate loading of the implanted femur based on the intact femur-loading configuration. Four reconstructions with Lubinus SPII, Charnley Roundback, Muller Straight and Stanmore prostheses were used in the study. Pseudophysiologic and nonphysiologic implanted system forces were generated and assessed with finite element analysis. Using an equilibrium system of forces composed by the Fx (medially direction) component of the hip contact force and the bending moments Mx (median plane) and My (coronal plane) allowed adequate, pseudo-physiological loading of the implanted femur. We suggest that at least the bending moment at the coronal plane must be restored in the implanted femur-loading configuration.

Computer Simulation↗

PubMed2006

Human immunodeficiency virus type 1 coreceptor switching: V1/V2 gain-of-fitness mutations compensate for V3 loss-of-fitness mutations.

Human immunodeficiency virus type 1 (HIV-1) entry into target cells is mediated by the virus envelope binding to CD4 and the conformationally altered envelope subsequently binding to one of two chemokine receptors. HIV-1 envelope glycoprotein (gp120) has five variable loops, of which three (V1/V2 and V3) influence the binding of either CCR5 or CXCR4, the two primary coreceptors for virus entry. Minimal sequence changes in V3 are sufficient for changing coreceptor use from CCR5 to CXCR4 in some HIV-1 isolates, but more commonly additional mutations in V1/V2 are observed during coreceptor switching. We have modeled coreceptor switching by introducing most possible combinations of mutations in the variable loops that distinguish a previously identified group of CCR5- and CXCR4-using viruses. We found that V3 mutations entail high risk, ranging from major loss of entry fitness to lethality. Mutations in or near V1/V2 were able to compensate for the deleterious V3 mutations and may need to precede V3 mutations to permit virus survival. V1/V2 mutations in the absence of V3 mutations often increased the capacity of virus to utilize CCR5 but were unable to confer CXCR4 use. V3 mutations were thus necessary but not sufficient for coreceptor switching, and V1/V2 mutations were necessary for virus survival. HIV-1 envelope sequence evolution from CCR5 to CXCR4 use is constrained by relatively frequent lethal mutations, deep fitness valleys, and requirements to make the right amino acid substitution in the right place at the right time.

Amino Acid Sequence↗

PubMed2006

Recurrent acute postinfectious glomerulonephritis.

Recurrent acute postinfectious glomerulonephritis is infrequent in childhood and exceptional in adults. The factors that determine recurrence are poorly understood. Selective IgA deficiency is characterized by an increased incidence of gastrointestinal and respiratory infections. The case of a 33-year-old man with a history of repetitive sinopulmonary infections and diagnosed with selective IgA deficiency is described. He suffered 2 episodes of postinfectious glomerulonephritis within a 15-year period. Selective IgA deficiency may have predisposed to the development of recurrent postinfectious glomerulonephritis

Acute Disease↗

PubMed2006

[Magnetic resonance in moderate and severe head injury: comparative study of CT and MR findings. Characteristics related to the presence and location of diffuse axonal injury in MR].

INTRODUCTION: Cranial CT has been the most extended evaluation means for patients suffering head trauma. However, it has low sensitivity in the identification of diffuse axonal injury and posterior fossa lesions. Cranial MR is a potentially more sensitive test but difficult to perform in these patients, a fact that has hampered its generalised use. OBJECTIVE: To compare the identification capability of traumatic intracranial lesions by both diagnostic tests in patients with moderate and severe head injury and to determine which radiological characteristics are associated with the presence of diffuse injury in MR and their clinical severity. MATERIAL AND METHODS: 100 patients suffering moderate or severe head injury to whom a MR had been performed in the first 30 days after trauma were included. All clinical variables related to prognosis were registered, as well as the data from the initial CT following Marshall et al., classification. The MR was blindly evaluated by two neuroradiologists that were not aware of the initial CT results or the clinical situation of the patient. All lesions were registered as well as the classification following the classification of lesions related to DAI described by Adams et al. CT and MR findings were compared evaluating the sensitivities of each test. Factors related to the presence of diffuse injury in MR were studied by univariate analysis using chi2 test and simple correlations. RESULTS: MR is more sensitive than CT for lesions in cerebral white matter, corpus callosum and brainstem. It also detects a greater number of cerebral contussions. The presence of diffuse axonal injury depends on the mechanism of the trauma, being more frequent in higher energy trauma, specially in traffic accidents. Among the radiological characteristics associated to DAI the most clearly related is intraventricular haemorrhage. The presence of a deeper injury and a higher score in the scales of Adams is associated with a lower score in the GCS and motor GCS, and so with a worse level of consciousness and bigger severity of injury, confirming Ommaya's model.

Adolescent↗

PubMed2005

Numerical study of the electrical conductivity and polarization in a suspension of spherical cells.

The spatial distribution of electrical potential and current in a suspension of spherical cells under an applied electric field was numerically obtained using the equivalent circuit method (ECM). The effect of the proximity of the cells was studied in a set of simulations where the volumetric fraction varied from 0.24 to 0.66. The results show that the transmembrane potential for cells in the suspension is lower than the theoretically predicted value for a single dielectric membrane under a uniform electric field. It was also observed that as the volumetric fraction is increased, the transmembrane potential on the pole of the cells decreases linearly. Furthermore, the conductivity of the suspension was also observed to be a function of the volumetric fraction and this result is in a good agreement with the Maxwell's model for spherical particles suspended in a volume conductor.

Animals↗

PubMed2005

The bisexual branching process with population-size dependent mating as a mathematical model to describe phenomena concerning to inhabit or re-inhabit environments with animal species.

We consider the bisexual Galton-Watson branching process with population-size dependent mating as a mathematical model adequate for the description of some natural phenomena. More specifically we are interested in studying some questions about the problem of populating an environmental with new animal species or re-populating it with species which have previously disappeared.

Algorithms↗

PubMed2005

Structural analysis of a set of proteins resulting from a bacterial genomics project.

The targets of the Structural GenomiX (SGX) bacterial genomics project were proteins conserved in multiple prokaryotic organisms with no obvious sequence homolog in the Protein Data Bank of known structures. The outcome of this work was 80 structures, covering 60 unique sequences and 49 different genes. Experimental phase determination from proteins incorporating Se-Met was carried out for 45 structures with most of the remainder solved by molecular replacement using members of the experimentally phased set as search models. An automated tool was developed to deposit these structures in the Protein Data Bank, along with the associated X-ray diffraction data (including refined experimental phases) and experimentally confirmed sequences. BLAST comparisons of the SGX structures with structures that had appeared in the Protein Data Bank over the intervening 3.5 years since the SGX target list had been compiled identified homologs for 49 of the 60 unique sequences represented by the SGX structures. This result indicates that, for bacterial structures that are relatively easy to express, purify, and crystallize, the structural coverage of gene space is proceeding rapidly. More distant sequence-structure relationships between the SGX and PDB structures were investigated using PDB-BLAST and Combinatorial Extension (CE). Only one structure, SufD, has a truly unique topology compared to all folds in the PDB.

Databases, Protein↗