Search PubMed⌕ Search

Biomedical subjects

A B Rubin

Publications and source records attributed to A B Rubin.

At least 145 records · Page 8Linked to original sources

[Influence of new hybrid antioxidants ichphans on erythrocyte morphology].

Scanning electron microscopy was used to study the effects of the new generation of compounds ICHFANs, which have a combined antioxidant and acetylcholine esterase inhibitory effect on the surface architectonics of erythrocytes. The incorporation of each of the studied compounds with the positively charged quaternary ammonium in the erythrocyte membrane and their distribution in the itramembraneous space were accompanied by the formation of echinocytes, stomatocytes, and compensative effects on erythrocyte shape. The time-dependent morphological transformation of erythrocytes apparently is determined by changes in the distribution of the compounds between the outer and inner monolayers of the erythrocyte membrane. A difference in the morphological effects of compounds with different hydrophobic properties was revealed.

Animals↗

[Mathematical model of an experimental ecological system with spatially separated components].

The paper describes a model of an experimental ecological system consisting of autotrophic and heterotrophic components and a nutrient medium. The system has a zero stationary state and needs a correction. The life time of the system and the level of the necessary correction have been determined for the experimental ecological system: lettuce - slugs - nutrient solution. Optimal conditions for the conjugation of trophic components of the system have been established.

Ecological Systems, Closed↗

[Effect of nitric oxide on viscosity of nerve cell membranes].

The influence of nitric oxide on the microviscosity of nerve cell membranes was investigated by resonance Raman (RR) spectroscopy. Changes in membrane viscosity were estimated from the resonance Raman-spectra of carotenoids localized in the axon plasmatic membrane and membranes of subcellular vesicles (cytosomes). For the nerve fibre, the extracellular addition of nitric oxide donor, sodium nitroprusside (0.5 mM), caused an increase in the 1526 cm(-1) band relative half-width and the modification of 1160 cm-1 band structure. Moreover, sodium nitroprusside led to an increase in the I1526/I1160 ratio by 13% in 25 min and a decrease in this ratio by 10% in 50 min. In the case of cytosomes, sodium nitroprusside (0.5 mM) resulted in the reduction of the I1526/I1160 ratio by 8% in 25 and 50 min. It was shown that the neuron rhythmic activity correlated with the I1526/I1160 ratio and cytosome membrane microviscosity. We suppose that nitric oxide causes a conformational transition of carotenoids in the axon plasmatic membrane and the membranes of cytosomes. This process can be due to nitric oxide-induced changes of the membrane microviscosity or potential.

Animals↗

[Modelling of pattern formation and oscillations in pH and transmembrane potential near the cell membrane of Chara corallina].

A mathematical model of potencial-dependent proton transfer across the membrane of Chara corallina cells is considered. To construct the model, partial differential equations describing the system dynamics in time and in space were used. The variables of the model are the proton concentration and membrane potential. The model describes the experimentally observed inhomogeneous distribution of transmembrane potential and pH along the membrane and oscillations of the potential and pH in time. A mechanism of the distribution of pH and membrane potential along the Chara corallina cell is suggested.

Algal Proteins↗

[The influence of new hybrid antioxidants ichphans on the kinetics of ascorbate-induced reduction of spin probe radical centers in liposomes].

The influence of new hybrid antioxidants ichphans on the structure of liposome lipid bilayer was studied. The analysis of the kinetics of the ascorbate-induced reduction of spin probe radical centers incorporated in a membrane revealed that ichphans produce a modifying effect on the structure of liposome membrane. It was established that derivates with distinct hydrophobic properties transform different sites of the membrane that are the sites of localization of ichphans in the intramembraneous space. The data obtained suggest that lipid components play an important role in the effects of ichphans on biological membranes.

Antioxidants↗

[A study of protein structure changes during hydration by diffuse X-ray scattering. I. The intensity and the shape of "10-angstrom" maximum].

The angle dependencies of diffuse x-ray scattering intensities were studied in a wide range of angles from 3 to 80 degrees for water-soluble and membrane proteins with a different structural organization: alpha-helical protein myoglobin, alpha-helical protein serum albumen, alpha + beta protein lysozyme, and transmembrane proteins of photosynthetic reaction centers (RC) from purple bacteria Rhodobacter sphaeroides, and Blastochlorii (Rhodopseudomonas) viridis containing cytocrome c, situated out side the membrane, and for H and L+M subunits of membrane protein of reaction center from Rb. sphaeroides for various hydration degrees. The hydration/dehydration process was studied for water-soluble proteins (within hydration range from h = 0.05 to h = 1). The hydration/dehydration process appears to be reversible. All water-soluble proteins show a 10 angstroms peak, and proteins of reaction center do not show this peak. A quantitative comparable study of the behaviour for of the 10 angstroms peak different proteins the degree of lysozyme hydration increases from h = 0.05 to h = 0.45, the protein structure slightly changes (most probably the motifoffolding), the structure of myoglobin in solution is slightly different from the structure in crystal. By taking into account the changes in the shape and intensity of the 10 angstroms peak only, it is impossible to make the conclusion about structural changes in other proteins studied. A correlation between the structural changes observed and dynamic and functional properties of proteins is discussed.

Animals↗

[Photochemical activity of photosystem II and hydrogen photoproduction in sulfur-deprived Chlamydomonas reinhardtii mutants D1-R323D and D1-R323L].

The role of photosystem II in hydrogen photoproduction by Chlamydomonas reinhardtii cells was studied in mutants with modified D1-protein. In D1-R323D and D1-R323L mutants, the replacement of arginine by aspartate or leucine, respectively, resulted in the disruption of electron transport at the donor side of photosystem II. The rate of oxygen evolution in D1-R323D decreased twice as compared to the pseudo-wild type (pWT), and in D1-R323L no oxygen evolution was detected. The latter mutant was not capable of photoautotrophical growth. The dynamics of changes in oxygen content, the reduction of photosystem II active reaction centers (deltaF/F(1)m), and hydrogen production rate in pWT were found to be similar to the wild type if cultivated under sulfur deprivation in a closed bioreactor. The observed gradual decrease in the deltaF/F(1)m value turned to a sharp drop almost to zero followed by a partial recovery during which the production of hydrogen set in. The transition to the anaerobic phase in D1-R323D cultured in a sulfur-deprived medium occurred earlier than it happened in pWt under the same conditions. However, the partial recovery of photosystem II activity and hydrogen production started at a later time, and the rate of hydrogen production was low. The D1-R323L mutant incapable of oxygen evolution entered the rapidly anaerobiosis but produced no hydrogen. The kinetics of photoinduced redox transitions in P700 was similar in all investigated strains and was not affected by diuron addition. This implies that the mutants had a pool of reducers, which could donate electrons through the quinone pool or cytochrome to photosystem I. However, in D1-R323L mutant lacking the active photosystem II, this condition was not sufficient to support hydrogenase activity.

Algal Proteins↗

[Modeling of hysteresis in pH pattern formation along the cell membrane of algae Chara corallina].

It is known that illumination of the algae Chara corallina results in the formation along the membrane of regions with inhomogeneous distribution of pH. It was shown that, in a particular range of illumination intensities, two states with different pH distribution are realized at one and the same value of light intensity: an entirely homogeneous state and completely formed structures (pattern). The transition from the homogeneous state to the pattern formation takes place at one value of light intensity, and the back transition, at another light intensity, i.e., the hysteresis is observed. This phenomenon was studied by mathematical modeling. The mechanism of hysteresis is discussed.

Cell Membrane↗

[Fluorescence parameters of chlorophyll in leaves of caules plants in different environmental conditions].

The functional state of medicinal plants of Convallaria majalis L., Vaccinium vitis-idaeae L., Arctostaphylos uva-ursi L. in connection with heavy metal accumulation in their leaves under man impact was studied by the pulse-amplitude-modulation (PAM) fluorometric method. The relative yield of variable fluorescence (F(v)/F(m)), induction of fluorescence of chlorophyll, and fluorescence quenching processes in leaves at different distances from the local Kirov-Sovetsk, Kirov-Omutninsk road in Kirov region were analyzed. Changes in biophysical characteristics with the increasing content of heavy metals in leaves were demonstrated. The most informative characteristic is F(v)/F(m). Its value correlates with the activity of the photosynthetic apparatus and reflects the potential effeciency of photosynthesis. The better are the environmental conditions of plant growth, the higher is the F(v)/F(m) ratio and the lower is its average statistical deviation. Fluorescence induction curves do not always vary in shape under our ecological conditions, indicating relatively favorable conditions at places of plant growth investigated. The rate of the environmental pollution in the investigated region is not critical, since the content of heavy metal in leaves does not change considerably with the distance from the road.

Chlorophyll↗

[A study of protein structure changes during hydration by means of diffuse X-ray scattering. II. Fourier transform analysis of X-ray scattering data].

Radial distribution functions were deduced by Fourier transform analysis of angular dependences of diffuse x-ray scattering intensities for the following proteins with different hydration degree: water-soluble a-protein myoglobin, water-soluble alpha+beta protein lysozyme, and transmembrane proteins of photosynthetic reaction centers from purple bacteria Rhodobacter sphaeroides and Blastochlorii viridis. The results of Fourier analysis of x-ray scattering intensities give the quantitative characteristics of the mechanisms underlying the influence of water on the formation of biomacromolecules. Water, on the one hand, weakens the intraglobular hydrogen bond net, loosens the protein structure, and increases the internal conformational dynamics. Concurrently water arranges the stability and ordering of the macromolecule. A sharp correlation is observed between the shift of the "first" peak of radial distribution functions, the weakening of the intraglobular hydrogen bond net, the increase in intraglobular mobility, and the appearance of functional activity in macromolecules. The behavior of the "first" peak is similar to that observed in transmembrane protein of reaction center and water-soluble proteins. The "first" peak for transmembrane protein of reaction center reaches its maximum value much faster (at smaller hydration degrees) than for water-soluble proteins. The fast transfer of reaction center protein to its native state during hydration is due to the fact that the dehydrated conformation of reaction center protein is very close to the native one. From a comparison of the radial distribution functions for water, water-soluble proteins and transmembrane proteins, one may conclude that water has the lowest packing density and the lowest order; water-soluble proteins have a larger packing density and are more ordered than water, and transmembrane proteins have the highest degree of packing density and ordering.

Animals↗

[Kinetics of pigment-acceptor interaction induced by steady-state illumination in Synechocystis spaeroides photosystem I preparations cooled to 160 K in the dark and on light].

The kinetics of dark reduction of chlorophyll P700 oxidized by steady-state illumination in photosystem I reaction center preparations of cyanobacterium Synechocystis sp. coolled in the dark to 160 K is greatly nonexponential. The characteristic times for the components of the reaction are from fractions of a second to minutes and more. During cooling reaction center preparations on actinic light, a great part of chlorophyll P700 is fixed at 160 K in oxidized state. The kinetics of dark reduction of P700+ in the fraction of reaction centers that retain the photochemical activity in these conditions is faster than the kinetics in samples cooled in the dark. A theoretical analysis of the substantial deceleration of the P700+ dark recovery kinetics was done for photosystem I reaction center preparations oxidized by steady-state illumination to 160 K in contrast with situation that arises after the oxidation of reaction centers by single short light pulses. The deceleration of the kinetics in samples activated by steady-state illumination can be explained by processes of microconformational relaxation, connected with proton shifts in the reaction center structure.

Chlorophyll↗

[The temperature factor and magnetic noise under the conditions of stochastic resonance of magnetosomes].

The influence of magnetic noise on the dynamics of magnetic nanoparticles under the conditions of stochastic resonance is considered. The effect of the magnetic noise is shown to be equivalent to the growth of the effective thermostat temperature for the particles at the permanent actual temperature of the medium. This regularity may be used for testing the hypothesis on the involvement of magnetic nanoparticles in the formation of biological effects of weak magnetic fields.

Ferrosoferric Oxide↗

[Examination of chlorophyll fluorescence in sulfur-deprived cells of Chlamydomonas reinhardtii].

Modulated fluorometry (PAM) was applied for probing the photosynthesis in cells of C. reinhardtii during sulfur deprivation. A significant (up to a fourfold) increase in chlorophyll fluorescence yield (parameters F(o) and F(m)) normalized to chlorophyll concentration was shown for deprived cells. An analysis of nonphotochemical quenching of chlorophyll fluorescence indicated a considerable modification of the energy deactivation pathways in PS II of sulfur-deprived cells. Thus, starved cells exhibited a lower deltapH-dependent quenching of excited states and a higher thermal dissipation of excess light energy in reaction centers of PS II, as well as the transition of the photosynthetic apparatus primarily to state 2. However, these changes cannot cause the elevation of chlorophyll fluorescence in the cells under sulfur limitation. The phenomenon observed may be due to a partial dissociation of light-harvesting complexes from reaction centers of PS II and/or dysfunction of the dissipative cycle in PS II with cytochrome b559 as an intermediate.

Animals↗

[The paradox of magnetobiology: analysis and prospects for solution].

The wording, content, and corollaries of the so-called "kT problem" are considered. The problem points to the paradox of the biological effects of weak low-frequency magnetic fields. The conventional wording of the problem contains implicit assumptions the analysis of which shows their incomplete physical validity.

Electromagnetic Fields↗

[The application of PS II model for the analysis of fluorescence yield transients induced by actinic single turnover flash in the time range from 100 ns to 10 s].

Changes in flash-induced fluorescence yield in preparations of thermophilic Chlorella pyrenoidosa Chick cells (native and in the presence of DCMU) were investigated in the time range from 100 ns to 10 s using a new measuring system. The results were analyzed by mathematical modeling of processes in photosystem II. It was shown that the detailed description of recombination (including nonradiative) processes in photosystem II is important to simulate the fluorescence yield transients induced by an actinic single turnover flash. The model photosystem II parameters were modified to describe the light-induced effects in the presence of DCMU. By comparing the theoretical fluorescence curves with experimental ones, we obtained the values of relative fluorescence yield and the FM/F0 ratio, which is typical for experimental data. As a result of simulation, the values of the model parameters (rate constants of electron transfers at the donor and acceptor sites of photosystem II, pH in stroma, initial redox state of the plastoquinone pool, the rate of plastoquinol oxidation, and the rate constants of nonradiative recombination processes) were determined.

Chlorella↗

[Study of the nature of regulation of potential-dependent channels by Raman spectroscopy].

The light scattering spectra of frog somatic nerves during excitation, its block by tetrodotoxin and at different Ca2+ and H+ extracellular concentrations have been investigated. In all cases changes were observed in the C40-carotenoid peaks enhanced by the resonance Raman effect. These changes can be explained by transient carbon-carbon bond equalization of the polyene chain. The mechanism of regulation of Na-channel function by "potential-sensor" in relation to the excitable membrane was discussed.

Action Potentials↗

[Comparative analysis of sequences of protein D2 from photosystem 2 reaction center and various Ca 2+-binding proteins].

The amino acid sequence of D2 protein was compared with those of calcium binding proteins and receptor for calcium channel blockers in connection with the data showing the participation of Ca2+ in photosystem 2 electron transport and the inhibition of this process by calmodulin antagonists, calcium channel blockers and local anesthetics. Protein D2 possesses a pattern analogous to the "EF-hand" sites of the calcium binding proteins. Comparison of the amino acid sequence of the calmodulin fragment binding the phenothiazine type calmodulin antagonists with the amino acid sequence of D2 protein and calcium channel protein revealed a high degree of sequence identity. Common structural features take place also between the membrane spanning segment III of D2 protein, which contains the tyrosine residue (161), responsible for ESR-signal IIS, and the membrane segment IVS5 of calcium channel protein. A model explaining the mechanism of calcium function in the oxygen-evolving system is proposed.

Amino Acid Sequence↗